RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 MROH1Q8NDA8 1641 aa11.13□□□□□ -0.63
HERPUD1-217ENST00000569429 MAST1Q9Y2H9 1570 aa11.12□□□□□ -0.63
HERPUD1-217ENST00000569429 EEA1Q15075 1411 aa11.12□□□□□ -0.63
HERPUD1-217ENST00000569429 HRCP23327 699 aa11.12□□□□□ -0.63
HERPUD1-217ENST00000569429 PIK3C2BO00750 1634 aa11.12□□□□□ -0.63
HERPUD1-217ENST00000569429 CEP152O94986 1710 aa11.12□□□□□ -0.63
HERPUD1-217ENST00000569429 BCL9LQ86UU0 1499 aa11.12□□□□□ -0.63
HERPUD1-217ENST00000569429 BRINP3Q76B58 766 aa11.11□□□□□ -0.63
HERPUD1-217ENST00000569429 DEFB132Q7Z7B7 95 aa11.1□□□□□ -0.63
HERPUD1-217ENST00000569429 LRRC59Q96AG4 307 aaKnown RBP11.1□□□□□ -0.63
HERPUD1-217ENST00000569429 ATRNO75882 1429 aa11.09□□□□□ -0.63
HERPUD1-217ENST00000569429 CASKIN1Q8WXD9 1431 aa11.09□□□□□ -0.63
HERPUD1-217ENST00000569429 CEP350Q5VT06 3117 aa11.09□□□□□ -0.63
HERPUD1-217ENST00000569429 CCNB3Q8WWL7 1395 aa11.09□□□□□ -0.63
HERPUD1-217ENST00000569429 C19orf44Q9H6X5 657 aa11.09□□□□□ -0.63
HERPUD1-217ENST00000569429 USP21Q9UK80 565 aa11.09□□□□□ -0.63
HERPUD1-217ENST00000569429 ZNF644Q9H582 1327 aaPredicted RBP11.09□□□□□ -0.63
HERPUD1-217ENST00000569429 PNPLA6Q8IY17 1366 aa11.08□□□□□ -0.64
HERPUD1-217ENST00000569429 ATF3P18847 181 aa11.08□□□□□ -0.64
HERPUD1-217ENST00000569429 EFCAB6Q5THR3 1501 aa11.08□□□□□ -0.64
HERPUD1-217ENST00000569429 FNBP4Q8N3X1 1017 aaPredicted RBP11.07□□□□□ -0.64
HERPUD1-217ENST00000569429 ARHGAP31Q2M1Z3 1444 aa11.07□□□□□ -0.64
HERPUD1-217ENST00000569429 ASXL1Q8IXJ9 1541 aa11.06□□□□□ -0.64
HERPUD1-217ENST00000569429 SENP3-EIF4A1A0A087X0R7 540 aa11.06□□□□□ -0.64
HERPUD1-217ENST00000569429 PSDA5PKW4 1024 aaPredicted RBP11.06□□□□□ -0.64
HERPUD1-217ENST00000569429 BRWD3Q6RI45 1802 aa11.06□□□□□ -0.64
HERPUD1-217ENST00000569429 UTRNP46939 3433 aa11.06□□□□□ -0.64
HERPUD1-217ENST00000569429 CCDC141Q6ZP82 1450 aa11.06□□□□□ -0.64
HERPUD1-217ENST00000569429 EIF2AK4Q9P2K8 1649 aaKnown RBP11.06□□□□□ -0.64
HERPUD1-217ENST00000569429 UNC13BO14795 1591 aa11.05□□□□□ -0.64
HERPUD1-217ENST00000569429 RSPH4AQ5TD94 716 aa11.05□□□□□ -0.64
HERPUD1-217ENST00000569429 C14orf37Q86TY3 774 aa11.05□□□□□ -0.64
HERPUD1-217ENST00000569429 STAG3Q9UJ98 1225 aa11.05□□□□□ -0.64
HERPUD1-217ENST00000569429 SPHKAPQ2M3C7 1700 aa11.04□□□□□ -0.64
HERPUD1-217ENST00000569429 ADAMTS2O95450 1211 aa11.04□□□□□ -0.64
HERPUD1-217ENST00000569429 SF3B2Q13435 895 aaKnown RBP11.04□□□□□ -0.64
HERPUD1-217ENST00000569429 PTCH1Q13635 1447 aa11.02□□□□□ -0.64
HERPUD1-217ENST00000569429 DCCP43146 1447 aa11.01□□□□□ -0.65
HERPUD1-217ENST00000569429 FYCO1Q9BQS8 1478 aa11□□□□□ -0.65
HERPUD1-217ENST00000569429 IDI1Q13907 227 aa11□□□□□ -0.65
HERPUD1-217ENST00000569429 BCANQ96GW7 911 aa11□□□□□ -0.65
HERPUD1-217ENST00000569429 GJD4Q96KN9 370 aaPredicted RBP11□□□□□ -0.65
HERPUD1-217ENST00000569429 MARF1Q9Y4F3 1742 aaKnown RBP11□□□□□ -0.65
HERPUD1-217ENST00000569429 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.99□□□□□ -0.65
HERPUD1-217ENST00000569429 TBX22Q9Y458 520 aa10.99□□□□□ -0.65
HERPUD1-217ENST00000569429 CHD4Q14839 1912 aa10.99□□□□□ -0.65
HERPUD1-217ENST00000569429 PLEKHG1Q9ULL1 1385 aa10.99□□□□□ -0.65
HERPUD1-217ENST00000569429 UBTFP17480 764 aaKnown RBP10.98□□□□□ -0.65
HERPUD1-217ENST00000569429 C1QTNF8P60827 252 aa10.98□□□□□ -0.65
HERPUD1-217ENST00000569429 MST1RQ04912 1400 aa10.98□□□□□ -0.65
HERPUD1-217ENST00000569429 MYO5BQ9ULV0 1848 aa10.98□□□□□ -0.65
HERPUD1-217ENST00000569429 ZNF784Q8NCA9 323 aaPredicted RBP10.97□□□□□ -0.65
HERPUD1-217ENST00000569429 ADGRB3O60242 1522 aa10.97□□□□□ -0.65
HERPUD1-217ENST00000569429 ARHGEF5Q12774 1597 aa10.97□□□□□ -0.65
HERPUD1-217ENST00000569429 LAMC1P11047 1609 aa10.97□□□□□ -0.65
HERPUD1-217ENST00000569429 MTUS2Q5JR59 1369 aa10.96□□□□□ -0.65
HERPUD1-217ENST00000569429 PIK3R4Q99570 1358 aa10.96□□□□□ -0.65
HERPUD1-217ENST00000569429 PPP1R15AO75807 674 aaPredicted RBP10.96□□□□□ -0.65
HERPUD1-217ENST00000569429 TSPY4P0CV99 314 aa10.96□□□□□ -0.65
HERPUD1-217ENST00000569429 TSPY10P0CW01 314 aa10.96□□□□□ -0.65
HERPUD1-217ENST00000569429 BAG6P46379 1132 aa10.96□□□□□ -0.65
HERPUD1-217ENST00000569429 COL22A1Q8NFW1 1626 aaPredicted RBP10.95□□□□□ -0.66
HERPUD1-217ENST00000569429 GLI3P10071 1580 aa10.95□□□□□ -0.66
HERPUD1-217ENST00000569429 ZFYVE9O95405 1425 aa10.95□□□□□ -0.66
HERPUD1-217ENST00000569429 DCAF8L1A6NGE4 600 aa10.95□□□□□ -0.66
HERPUD1-217ENST00000569429 DDX17Q92841 729 aaKnown RBP10.95□□□□□ -0.66
HERPUD1-217ENST00000569429 R3HDM1Q15032 1099 aaKnown RBP10.94□□□□□ -0.66
HERPUD1-217ENST00000569429 HDGFP51858 240 aaKnown RBP10.92□□□□□ -0.66
HERPUD1-217ENST00000569429 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.92□□□□□ -0.66
HERPUD1-217ENST00000569429 RALGAPBQ86X10 1494 aa10.92□□□□□ -0.66
HERPUD1-217ENST00000569429 ADAMTS13Q76LX8 1427 aa10.92□□□□□ -0.66
HERPUD1-217ENST00000569429 SOS2Q07890 1332 aaPredicted RBP10.91□□□□□ -0.66
HERPUD1-217ENST00000569429 EHBP1L1Q8N3D4 1523 aa10.91□□□□□ -0.66
HERPUD1-217ENST00000569429 RGPD1P0DJD0 1748 aa10.9□□□□□ -0.66
HERPUD1-217ENST00000569429 MYOM2P54296 1465 aa10.9□□□□□ -0.66
HERPUD1-217ENST00000569429 SLC52A1Q9NWF4 448 aa10.9□□□□□ -0.66
HERPUD1-217ENST00000569429 NOS1P29475 1434 aa10.9□□□□□ -0.66
HERPUD1-217ENST00000569429 CEP162Q5TB80 1403 aa10.9□□□□□ -0.66
HERPUD1-217ENST00000569429 TRPM2O94759 1503 aa10.89□□□□□ -0.67
HERPUD1-217ENST00000569429 AMOTL2Q9Y2J4 779 aa10.89□□□□□ -0.67
HERPUD1-217ENST00000569429 RIMS2Q9UQ26 1411 aa10.89□□□□□ -0.67
HERPUD1-217ENST00000569429 NINLQ9Y2I6 1382 aa10.89□□□□□ -0.67
HERPUD1-217ENST00000569429 CAMTA1Q9Y6Y1 1673 aa10.89□□□□□ -0.67
HERPUD1-217ENST00000569429 ONECUT3O60422 494 aaPredicted RBP10.88□□□□□ -0.67
HERPUD1-217ENST00000569429 KRT27Q7Z3Y8 459 aa10.88□□□□□ -0.67
HERPUD1-217ENST00000569429 UNC5CLQ8IV45 518 aa10.88□□□□□ -0.67
HERPUD1-217ENST00000569429 SEPT12Q8IYM1 358 aa10.88□□□□□ -0.67
HERPUD1-217ENST00000569429 DUOX2Q9NRD8 1548 aa10.88□□□□□ -0.67
HERPUD1-217ENST00000569429 DISP2A7MBM2 1401 aa10.87□□□□□ -0.67
HERPUD1-217ENST00000569429 PTPRUQ92729 1446 aa10.87□□□□□ -0.67
HERPUD1-217ENST00000569429 EN1Q05925 392 aaPredicted RBP10.87□□□□□ -0.67
HERPUD1-217ENST00000569429 GCC2Q8IWJ2 1684 aa10.87□□□□□ -0.67
HERPUD1-217ENST00000569429 LMTK2Q8IWU2 1503 aa10.87□□□□□ -0.67
HERPUD1-217ENST00000569429 XRN1Q8IZH2 1706 aaKnown RBP10.87□□□□□ -0.67
HERPUD1-217ENST00000569429 SLIT2O94813 1529 aa10.86□□□□□ -0.67
HERPUD1-217ENST00000569429 TMEM131LA2VDJ0 1609 aa10.85□□□□□ -0.67
HERPUD1-217ENST00000569429 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.85□□□□□ -0.67
HERPUD1-217ENST00000569429 EHMT2Q96KQ7 1210 aa10.85□□□□□ -0.67
HERPUD1-217ENST00000569429 RPRD2Q5VT52 1461 aaKnown RBP10.85□□□□□ -0.67
HERPUD1-217ENST00000569429 C1orf167Q5SNV9 1468 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms