RNA–Protein interactions for RNA: ENST00000568993.5

SNX20-204, Transcript of sorting nexin 20, humanhuman

TSL 1 (best)

Gene SNX20, Length 2,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-204ENST00000568993 SYNMO15061 1565 aa21.48■■□□□ 1.03
SNX20-204ENST00000568993 RPGRIP1LQ68CZ1 1315 aa21.47■■□□□ 1.03
SNX20-204ENST00000568993 SCAF11Q99590 1463 aaKnown RBP21.47■■□□□ 1.03
SNX20-204ENST00000568993 PPLO60437 1756 aa21.46■■□□□ 1.03
SNX20-204ENST00000568993 ARHGEF40Q8TER5 1519 aa21.45■■□□□ 1.02
SNX20-204ENST00000568993 ADGRF5Q8IZF2 1346 aa21.44■■□□□ 1.02
SNX20-204ENST00000568993 PREX1Q8TCU6 1659 aa21.43■■□□□ 1.02
SNX20-204ENST00000568993 SLC52A1Q9NWF4 448 aa21.43■■□□□ 1.02
SNX20-204ENST00000568993 POLR3GLQ9BT43 218 aa21.42■■□□□ 1.02
SNX20-204ENST00000568993 TMF1P82094 1093 aa21.39■■□□□ 1.02
SNX20-204ENST00000568993 SETBP1Q9Y6X0 1596 aa21.39■■□□□ 1.02
SNX20-204ENST00000568993 DISP3Q9P2K9 1392 aa21.39■■□□□ 1.02
SNX20-204ENST00000568993 CHGAP10645 457 aaKnown RBP21.39■■□□□ 1.01
SNX20-204ENST00000568993 PIK3C2GO75747 1445 aa21.38■■□□□ 1.01
SNX20-204ENST00000568993 CFAP70Q5T0N1 1121 aa21.38■■□□□ 1.01
SNX20-204ENST00000568993 EIF3AQ14152 1382 aaKnown RBP21.38■■□□□ 1.01
SNX20-204ENST00000568993 GTF3C3Q9Y5Q9 886 aa21.38■■□□□ 1.01
SNX20-204ENST00000568993 IDI1Q13907 227 aa21.37■■□□□ 1.01
SNX20-204ENST00000568993 NEXMIFQ5QGS0 1516 aa21.35■■□□□ 1.01
SNX20-204ENST00000568993 ERVK-7P63135 1459 aa21.35■■□□□ 1.01
SNX20-204ENST00000568993 KTN1Q86UP2 1357 aaKnown RBP21.35■■□□□ 1.01
SNX20-204ENST00000568993 SLC24A1O60721 1099 aa21.34■■□□□ 1.01
SNX20-204ENST00000568993 C14orf93Q9H972 538 aaKnown RBP21.34■■□□□ 1.01
SNX20-204ENST00000568993 ZFYVE9O95405 1425 aa21.34■■□□□ 1.01
SNX20-204ENST00000568993 CLTCQ00610 1675 aaKnown RBP21.33■■□□□ 1.01
SNX20-204ENST00000568993 TMEM131LA2VDJ0 1609 aa21.33■■□□□ 1
SNX20-204ENST00000568993 VGFO15240 615 aaPredicted RBP21.32■■□□□ 1
SNX20-204ENST00000568993 CCDC184Q52MB2 194 aa21.31■■□□□ 1
SNX20-204ENST00000568993 MYO3AQ8NEV4 1616 aa21.31■■□□□ 1
SNX20-204ENST00000568993 CDCA8Q53HL2 280 aa21.31■■□□□ 1
SNX20-204ENST00000568993 ADGRB1O14514 1584 aa21.3■■□□□ 1
SNX20-204ENST00000568993 PER1O15534 1290 aaPredicted RBP21.3■■□□□ 1
SNX20-204ENST00000568993 SPATA31D1Q6ZQQ2 1576 aa21.3■■□□□ 1
SNX20-204ENST00000568993 FBXO31Q5XUX0 539 aaPredicted RBP21.29■■□□□ 1
SNX20-204ENST00000568993 SBNO2Q9Y2G9 1366 aa21.29■■□□□ 1
SNX20-204ENST00000568993 MYO5BQ9ULV0 1848 aa21.28■■□□□ 1
SNX20-204ENST00000568993 RALBP1Q15311 655 aa21.28■■□□□ 1
SNX20-204ENST00000568993 MRS2Q9HD23 443 aa21.28■■□□□ 1
SNX20-204ENST00000568993 PANK3Q9H999 370 aa21.22■□□□□ 0.99
SNX20-204ENST00000568993 MLECQ14165 292 aa21.22■□□□□ 0.99
SNX20-204ENST00000568993 PARD3Q8TEW0 1356 aa21.22■□□□□ 0.99
SNX20-204ENST00000568993 KDM5AP29375 1690 aaKnown RBP21.21■□□□□ 0.99
SNX20-204ENST00000568993 MYBBP1AQ9BQG0 1328 aaKnown RBP21.2■□□□□ 0.98
SNX20-204ENST00000568993 ZMYM3Q14202 1370 aa21.2■□□□□ 0.98
SNX20-204ENST00000568993 CENPJQ9HC77 1338 aaPredicted RBP21.19■□□□□ 0.98
SNX20-204ENST00000568993 MYOM1P52179 1685 aa21.19■□□□□ 0.98
SNX20-204ENST00000568993 BRD4O60885 1362 aaPredicted RBP21.18■□□□□ 0.98
SNX20-204ENST00000568993 HNRNPUQ00839 825 aaKnown RBP eCLIP21.17■□□□□ 0.98
SNX20-204ENST00000568993 ESF1Q9H501 851 aaKnown RBP21.17■□□□□ 0.98
SNX20-204ENST00000568993 A2ML1A8K2U0 1454 aa21.17■□□□□ 0.98
SNX20-204ENST00000568993 TMEM132EQ6IEE7 984 aa21.16■□□□□ 0.98
SNX20-204ENST00000568993 NUTM2DQ5VT03 806 aaPredicted RBP21.16■□□□□ 0.98
SNX20-204ENST00000568993 FAM9BQ8IZU0 186 aa21.16■□□□□ 0.98
SNX20-204ENST00000568993 TRAK1Q9UPV9 953 aa21.16■□□□□ 0.98
SNX20-204ENST00000568993 QRICH2Q9H0J4 1663 aa21.15■□□□□ 0.98
SNX20-204ENST00000568993 PRKCSHP14314 528 aaPredicted RBP21.14■□□□□ 0.98
SNX20-204ENST00000568993 ARHGEF28Q8N1W1 1705 aaKnown RBP21.14■□□□□ 0.98
SNX20-204ENST00000568993 PNISRQ8TF01 805 aaKnown RBP21.13■□□□□ 0.97
SNX20-204ENST00000568993 STAG3Q9UJ98 1225 aa21.13■□□□□ 0.97
SNX20-204ENST00000568993 ASXL1Q8IXJ9 1541 aa21.12■□□□□ 0.97
SNX20-204ENST00000568993 CNGB1Q14028 1251 aaPredicted RBP21.12■□□□□ 0.97
SNX20-204ENST00000568993 TMC1Q8TDI8 760 aa21.12■□□□□ 0.97
SNX20-204ENST00000568993 NLRP13Q86W25 1043 aa21.12■□□□□ 0.97
SNX20-204ENST00000568993 NPC1L1Q9UHC9 1359 aa21.11■□□□□ 0.97
SNX20-204ENST00000568993 PUS7Q96PZ0 661 aaKnown RBP21.11■□□□□ 0.97
SNX20-204ENST00000568993 ALKQ9UM73 1620 aa21.09■□□□□ 0.97
SNX20-204ENST00000568993 KNSTRNQ9Y448 316 aa21.09■□□□□ 0.97
SNX20-204ENST00000568993 RIMS2Q9UQ26 1411 aa21.09■□□□□ 0.97
SNX20-204ENST00000568993 LRPPRCP42704 1394 aaKnown RBP21.08■□□□□ 0.97
SNX20-204ENST00000568993 AMER1Q5JTC6 1135 aaPredicted RBP21.08■□□□□ 0.97
SNX20-204ENST00000568993 ZBED9Q6R2W3 1325 aa21.08■□□□□ 0.96
SNX20-204ENST00000568993 TNRQ92752 1358 aa21.08■□□□□ 0.96
SNX20-204ENST00000568993 TRHP20396 242 aaPredicted RBP21.07■□□□□ 0.96
SNX20-204ENST00000568993 CC2D1BQ5T0F9 858 aaKnown RBP21.06■□□□□ 0.96
SNX20-204ENST00000568993 YTHDC2Q9H6S0 1430 aaKnown RBP21.05■□□□□ 0.96
SNX20-204ENST00000568993 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.04■□□□□ 0.96
SNX20-204ENST00000568993 PTPRMP28827 1452 aa21.04■□□□□ 0.96
SNX20-204ENST00000568993 SETD1AO15047 1707 aaKnown RBP21.03■□□□□ 0.96
SNX20-204ENST00000568993 EVC2Q86UK5 1308 aa21.02■□□□□ 0.96
SNX20-204ENST00000568993 TULP4Q9NRJ4 1543 aa21.01■□□□□ 0.95
SNX20-204ENST00000568993 HDGFP51858 240 aaKnown RBP21■□□□□ 0.95
SNX20-204ENST00000568993 UBR1Q8IWV7 1749 aa21■□□□□ 0.95
SNX20-204ENST00000568993 INSRP06213 1382 aa21■□□□□ 0.95
SNX20-204ENST00000568993 NLRP1Q9C000 1473 aa21■□□□□ 0.95
SNX20-204ENST00000568993 DLC1Q96QB1 1528 aa20.99■□□□□ 0.95
SNX20-204ENST00000568993 NRXN3Q9Y4C0 1643 aa20.99■□□□□ 0.95
SNX20-204ENST00000568993 CARD14Q9BXL6 1004 aa20.99■□□□□ 0.95
SNX20-204ENST00000568993 STK26Q9P289 416 aa20.97■□□□□ 0.95
SNX20-204ENST00000568993 C3P01024 1663 aa20.96■□□□□ 0.95
SNX20-204ENST00000568993 FER1L4A9Z1Z3 1794 aa20.96■□□□□ 0.95
SNX20-204ENST00000568993 TMEM2Q9UHN6 1383 aa20.96■□□□□ 0.95
SNX20-204ENST00000568993 PPP2R1AP30153 589 aa20.95■□□□□ 0.94
SNX20-204ENST00000568993 DNAJC5Q9H3Z4 198 aa20.95■□□□□ 0.94
SNX20-204ENST00000568993 ABCC11Q96J66 1382 aa20.95■□□□□ 0.94
SNX20-204ENST00000568993 USP32Q8NFA0 1604 aa20.94■□□□□ 0.94
SNX20-204ENST00000568993 NINLQ9Y2I6 1382 aa20.94■□□□□ 0.94
SNX20-204ENST00000568993 PRAM1Q96QH2 718 aa20.94■□□□□ 0.94
SNX20-204ENST00000568993 SLC12A5Q9H2X9 1139 aa20.94■□□□□ 0.94
SNX20-204ENST00000568993 SUPT16HQ9Y5B9 1047 aaKnown RBP20.94■□□□□ 0.94
SNX20-204ENST00000568993 POGKQ9P215 609 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms