RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, human

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND4A-208	ENST00000568515	CDCA8	Q53HL2	280 aa		28.11	■■■□□ 2.09
DENND4A-208	ENST00000568515	CLASP1	Q7Z460	1538 aa		28.11	■■■□□ 2.09
DENND4A-208	ENST00000568515	SLC4A3	P48751	1232 aa		28.11	■■■□□ 2.09
DENND4A-208	ENST00000568515	IQGAP1	P46940	1657 aa		28.11	■■■□□ 2.09
DENND4A-208	ENST00000568515	NFKBIB	Q15653	356 aa		28.1	■■■□□ 2.09
DENND4A-208	ENST00000568515	DAXX	Q9UER7	740 aa	Predicted RBP	28.1	■■■□□ 2.09
DENND4A-208	ENST00000568515	MADD	Q8WXG6	1647 aa		28.09	■■■□□ 2.09
DENND4A-208	ENST00000568515	SYNM	O15061	1565 aa		28.09	■■■□□ 2.09
DENND4A-208	ENST00000568515	PIK3C2G	O75747	1445 aa		28.08	■■■□□ 2.09
DENND4A-208	ENST00000568515	ASXL1	Q8IXJ9	1541 aa		28.07	■■■□□ 2.08
DENND4A-208	ENST00000568515	TRMT2A	Q8IZ69	625 aa	Known RBP	28.07	■■■□□ 2.08
DENND4A-208	ENST00000568515	GSE1	Q14687	1217 aa		28.05	■■■□□ 2.08
DENND4A-208	ENST00000568515	SCAF11	Q99590	1463 aa	Known RBP	28.05	■■■□□ 2.08
DENND4A-208	ENST00000568515	NPC1L1	Q9UHC9	1359 aa		28.03	■■■□□ 2.08
DENND4A-208	ENST00000568515	CCDC146	Q8IYE0	955 aa		28.02	■■■□□ 2.08
DENND4A-208	ENST00000568515	RTN4	Q9NQC3	1192 aa	Known RBP	28.01	■■■□□ 2.07
DENND4A-208	ENST00000568515	SCAPER	Q9BY12	1400 aa		28.01	■■■□□ 2.07
DENND4A-208	ENST00000568515	RGS3	P49796	1198 aa		28.01	■■■□□ 2.07
DENND4A-208	ENST00000568515	EIF3A	Q14152	1382 aa	Known RBP	28	■■■□□ 2.07
DENND4A-208	ENST00000568515	STAC3	Q96MF2	364 aa		28	■■■□□ 2.07
DENND4A-208	ENST00000568515	SPINK5	Q9NQ38	1064 aa	Predicted RBP	27.99	■■■□□ 2.07
DENND4A-208	ENST00000568515	NKTR	P30414	1462 aa	Known RBP	27.98	■■■□□ 2.07
DENND4A-208	ENST00000568515	SPHKAP	Q2M3C7	1700 aa		27.98	■■■□□ 2.07
DENND4A-208	ENST00000568515	ABCC2	Q92887	1545 aa		27.98	■■■□□ 2.07
DENND4A-208	ENST00000568515	APAF1	O14727	1248 aa		27.98	■■■□□ 2.07
DENND4A-208	ENST00000568515	MYOM1	P52179	1685 aa		27.97	■■■□□ 2.07
DENND4A-208	ENST00000568515	TRPM2	O94759	1503 aa		27.95	■■■□□ 2.06
DENND4A-208	ENST00000568515	BCAR3	O75815	825 aa		27.95	■■■□□ 2.06
DENND4A-208	ENST00000568515	PLCH2	O75038	1416 aa		27.95	■■■□□ 2.06
DENND4A-208	ENST00000568515	ANO8	Q9HCE9	1232 aa	Predicted RBP	27.95	■■■□□ 2.06
DENND4A-208	ENST00000568515		E9PSI1	815 aa		27.94	■■■□□ 2.06
DENND4A-208	ENST00000568515	EFCAB2	Q5VUJ9	269 aa		27.94	■■■□□ 2.06
DENND4A-208	ENST00000568515	CEP152	O94986	1710 aa		27.93	■■■□□ 2.06
DENND4A-208	ENST00000568515	FRAT1	Q92837	279 aa	Predicted RBP	27.92	■■■□□ 2.06
DENND4A-208	ENST00000568515	PTPRT	O14522	1441 aa		27.91	■■■□□ 2.06
DENND4A-208	ENST00000568515	TRAPPC8	Q9Y2L5	1435 aa		27.9	■■■□□ 2.06
DENND4A-208	ENST00000568515	BRPF3	Q9ULD4	1205 aa		27.89	■■■□□ 2.06
DENND4A-208	ENST00000568515	KDM5A	P29375	1690 aa	Known RBP	27.89	■■■□□ 2.05
DENND4A-208	ENST00000568515	CLTCL1	P53675	1640 aa		27.88	■■■□□ 2.05
DENND4A-208	ENST00000568515	ABCC1	P33527	1531 aa		27.88	■■■□□ 2.05
DENND4A-208	ENST00000568515	NGEF	Q8N5V2	710 aa		27.88	■■■□□ 2.05
DENND4A-208	ENST00000568515	IGHD	P01880	384 aa		27.87	■■■□□ 2.05
DENND4A-208	ENST00000568515	SHROOM2	Q13796	1616 aa		27.86	■■■□□ 2.05
DENND4A-208	ENST00000568515	DMRT2	Q9Y5R5	561 aa		27.85	■■■□□ 2.05
DENND4A-208	ENST00000568515	FRAT2	O75474	233 aa	Predicted RBP	27.85	■■■□□ 2.05
DENND4A-208	ENST00000568515	PDE3A	Q14432	1141 aa		27.85	■■■□□ 2.05
DENND4A-208	ENST00000568515	CGNL1	Q0VF96	1302 aa		27.84	■■■□□ 2.05
DENND4A-208	ENST00000568515	SPAG9	O60271	1321 aa	Known RBP	27.84	■■■□□ 2.05
DENND4A-208	ENST00000568515	KIAA1210	Q9ULL0	1709 aa		27.83	■■■□□ 2.05
DENND4A-208	ENST00000568515	SLC24A1	O60721	1099 aa		27.83	■■■□□ 2.05
DENND4A-208	ENST00000568515	CHD1	O14646	1710 aa		27.81	■■■□□ 2.04
DENND4A-208	ENST00000568515	CARD14	Q9BXL6	1004 aa		27.81	■■■□□ 2.04
DENND4A-208	ENST00000568515	VIRMA	Q69YN4	1812 aa	Known RBP	27.81	■■■□□ 2.04
DENND4A-208	ENST00000568515	USP19	O94966	1318 aa		27.8	■■■□□ 2.04
DENND4A-208	ENST00000568515	RTEL1-TNFRSF6B	F6WH68	1400 aa		27.8	■■■□□ 2.04
DENND4A-208	ENST00000568515	CENPJ	Q9HC77	1338 aa	Predicted RBP	27.79	■■■□□ 2.04
DENND4A-208	ENST00000568515	NINL	Q9Y2I6	1382 aa		27.79	■■■□□ 2.04
DENND4A-208	ENST00000568515	ERVK-7	P63135	1459 aa		27.79	■■■□□ 2.04
DENND4A-208	ENST00000568515	ERCC6L2	Q5T890	1561 aa		27.79	■■■□□ 2.04
DENND4A-208	ENST00000568515	CLUAP1	Q96AJ1	413 aa		27.78	■■■□□ 2.04
DENND4A-208	ENST00000568515	AFAP1	Q8N556	730 aa		27.77	■■■□□ 2.04
DENND4A-208	ENST00000568515	MAPK8IP3	Q9UPT6	1336 aa		27.77	■■■□□ 2.04
DENND4A-208	ENST00000568515	TET3	O43151	1660 aa		27.77	■■■□□ 2.04
DENND4A-208	ENST00000568515	CFAP70	Q5T0N1	1121 aa		27.77	■■■□□ 2.04
DENND4A-208	ENST00000568515	WWC1	Q8IX03	1113 aa		27.76	■■■□□ 2.04
DENND4A-208	ENST00000568515	DEPDC5	O75140	1603 aa		27.76	■■■□□ 2.03
DENND4A-208	ENST00000568515	COG6	Q9Y2V7	657 aa		27.75	■■■□□ 2.03
DENND4A-208	ENST00000568515	CANX	P27824	592 aa	Known RBP	27.75	■■■□□ 2.03
DENND4A-208	ENST00000568515	PANK1	Q8TE04	598 aa		27.75	■■■□□ 2.03
DENND4A-208	ENST00000568515	ZFYVE16	Q7Z3T8	1539 aa		27.74	■■■□□ 2.03
DENND4A-208	ENST00000568515	POLR3A	O14802	1390 aa	Predicted RBP	27.74	■■■□□ 2.03
DENND4A-208	ENST00000568515	ZCCHC11	Q5TAX3	1644 aa	Known RBP	27.73	■■■□□ 2.03
DENND4A-208	ENST00000568515	SEC24B	O95487	1268 aa		27.72	■■■□□ 2.03
DENND4A-208	ENST00000568515	KANK1	Q14678	1352 aa		27.72	■■■□□ 2.03
DENND4A-208	ENST00000568515	NEURL4	Q96JN8	1562 aa		27.72	■■■□□ 2.03
DENND4A-208	ENST00000568515	MAP3K4	Q9Y6R4	1608 aa		27.7	■■■□□ 2.03
DENND4A-208	ENST00000568515	ADGRF5	Q8IZF2	1346 aa		27.69	■■■□□ 2.02
DENND4A-208	ENST00000568515	MYOM2	P54296	1465 aa		27.69	■■■□□ 2.02
DENND4A-208	ENST00000568515	ABCA6	Q8N139	1617 aa		27.69	■■■□□ 2.02
DENND4A-208	ENST00000568515	VWDE	Q8N2E2	1590 aa		27.68	■■■□□ 2.02
DENND4A-208	ENST00000568515	BECN1	Q14457	450 aa		27.67	■■■□□ 2.02
DENND4A-208	ENST00000568515	RARS	P54136	660 aa	Known RBP	27.64	■■■□□ 2.02
DENND4A-208	ENST00000568515	AAMP	Q13685	434 aa		27.64	■■■□□ 2.02
DENND4A-208	ENST00000568515	PMFBP1	Q8TBY8	1022 aa		27.64	■■■□□ 2.02
DENND4A-208	ENST00000568515	KIF3B	O15066	747 aa		27.64	■■■□□ 2.01
DENND4A-208	ENST00000568515	RUNDC1	Q96C34	613 aa		27.63	■■■□□ 2.01
DENND4A-208	ENST00000568515	SBNO2	Q9Y2G9	1366 aa		27.63	■■■□□ 2.01
DENND4A-208	ENST00000568515	NEUROD2	Q15784	382 aa		27.63	■■■□□ 2.01
DENND4A-208	ENST00000568515	UHRF1BP1L	A0JNW5	1464 aa		27.63	■■■□□ 2.01
DENND4A-208	ENST00000568515	NLRP1	Q9C000	1473 aa		27.63	■■■□□ 2.01
DENND4A-208	ENST00000568515	ARAP3	Q8WWN8	1544 aa		27.62	■■■□□ 2.01
DENND4A-208	ENST00000568515	UGGT1	Q9NYU2	1555 aa		27.62	■■■□□ 2.01
DENND4A-208	ENST00000568515	MORC1	Q86VD1	984 aa		27.62	■■■□□ 2.01
DENND4A-208	ENST00000568515	RRP7A	Q9Y3A4	280 aa	Known RBP	27.61	■■■□□ 2.01
DENND4A-208	ENST00000568515	SHPRH	Q149N8	1683 aa		27.61	■■■□□ 2.01
DENND4A-208	ENST00000568515	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	27.6	■■■□□ 2.01
DENND4A-208	ENST00000568515	MYO3A	Q8NEV4	1616 aa		27.6	■■■□□ 2.01
DENND4A-208	ENST00000568515	PCDHB15	Q9Y5E8	787 aa		27.6	■■■□□ 2.01
DENND4A-208	ENST00000568515	TCP11L2	Q8N4U5	519 aa		27.59	■■■□□ 2.01
DENND4A-208	ENST00000568515	PHF23	Q9BUL5	403 aa	Predicted RBP	27.59	■■■□□ 2.01

Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms