RNA–Protein interactions for RNA: ENST00000568394.1

AC009041.2-204, humanhuman

TSL 1 (best) BASIC

Gene AC009041.2, Length 3,343 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-204ENST00000568394 CFAP70Q5T0N1 1121 aa25.32■■□□□ 1.64
AC009041.2-204ENST00000568394 STK26Q9P289 416 aa25.32■■□□□ 1.64
AC009041.2-204ENST00000568394 TRAK1Q9UPV9 953 aa25.31■■□□□ 1.64
AC009041.2-204ENST00000568394 NPM1P06748 294 aaKnown RBP eCLIP25.29■■□□□ 1.64
AC009041.2-204ENST00000568394 MFAP1P55081 439 aaKnown RBP25.28■■□□□ 1.64
AC009041.2-204ENST00000568394 TMF1P82094 1093 aa25.27■■□□□ 1.64
AC009041.2-204ENST00000568394 DNMT1P26358 1616 aaKnown RBP25.26■■□□□ 1.63
AC009041.2-204ENST00000568394 SPINK5Q9NQ38 1064 aaPredicted RBP25.25■■□□□ 1.63
AC009041.2-204ENST00000568394 PER1O15534 1290 aaPredicted RBP25.25■■□□□ 1.63
AC009041.2-204ENST00000568394 RAPGEF3O95398 923 aa25.25■■□□□ 1.63
AC009041.2-204ENST00000568394 MYH16Q9H6N6 1097 aa25.25■■□□□ 1.63
AC009041.2-204ENST00000568394 PLEKHH1Q9ULM0 1364 aa25.25■■□□□ 1.63
AC009041.2-204ENST00000568394 FOXD4L1Q9NU39 408 aa25.25■■□□□ 1.63
AC009041.2-204ENST00000568394 SYCP2Q9BX26 1530 aa25.24■■□□□ 1.63
AC009041.2-204ENST00000568394 RRP7AQ9Y3A4 280 aaKnown RBP25.24■■□□□ 1.63
AC009041.2-204ENST00000568394 NUP160Q12769 1436 aa25.23■■□□□ 1.63
AC009041.2-204ENST00000568394 DISP3Q9P2K9 1392 aa25.23■■□□□ 1.63
AC009041.2-204ENST00000568394 PARD3Q8TEW0 1356 aa25.22■■□□□ 1.63
AC009041.2-204ENST00000568394 SCAPERQ9BY12 1400 aa25.22■■□□□ 1.63
AC009041.2-204ENST00000568394 TBC1D2Q9BYX2 928 aa25.22■■□□□ 1.63
AC009041.2-204ENST00000568394 CYB5RLQ6IPT4 315 aa25.21■■□□□ 1.63
AC009041.2-204ENST00000568394 TRAK2O60296 914 aa25.2■■□□□ 1.63
AC009041.2-204ENST00000568394 PPP2R1AP30153 589 aa25.2■■□□□ 1.62
AC009041.2-204ENST00000568394 GCC2Q8IWJ2 1684 aa25.2■■□□□ 1.62
AC009041.2-204ENST00000568394 TRAPPC8Q9Y2L5 1435 aa25.19■■□□□ 1.62
AC009041.2-204ENST00000568394 MCM4P33991 863 aa25.17■■□□□ 1.62
AC009041.2-204ENST00000568394 SLFN5Q08AF3 891 aa25.16■■□□□ 1.62
AC009041.2-204ENST00000568394 USP19O94966 1318 aa25.15■■□□□ 1.62
AC009041.2-204ENST00000568394 CENPJQ9HC77 1338 aaPredicted RBP25.14■■□□□ 1.62
AC009041.2-204ENST00000568394 ZBTB7CA1YPR0 619 aa25.14■■□□□ 1.61
AC009041.2-204ENST00000568394 PLEKHG5O94827 1062 aa25.14■■□□□ 1.61
AC009041.2-204ENST00000568394 TNNQ9UQP3 1299 aa25.13■■□□□ 1.61
AC009041.2-204ENST00000568394 MAPK8IP3Q9UPT6 1336 aa25.12■■□□□ 1.61
AC009041.2-204ENST00000568394 DMRT2Q9Y5R5 561 aa25.12■■□□□ 1.61
AC009041.2-204ENST00000568394 CCDC141Q6ZP82 1450 aa25.12■■□□□ 1.61
AC009041.2-204ENST00000568394 PDZRN3Q9UPQ7 1066 aa25.11■■□□□ 1.61
AC009041.2-204ENST00000568394 KDM5CP41229 1560 aa25.11■■□□□ 1.61
AC009041.2-204ENST00000568394 ESPNB1AK53 854 aa25.09■■□□□ 1.61
AC009041.2-204ENST00000568394 ADGRF5Q8IZF2 1346 aa25.09■■□□□ 1.61
AC009041.2-204ENST00000568394 ABCC10Q5T3U5 1492 aa25.09■■□□□ 1.61
AC009041.2-204ENST00000568394 RBM10P98175 930 aaKnown RBP25.09■■□□□ 1.61
AC009041.2-204ENST00000568394 CLCN1P35523 988 aa25.08■■□□□ 1.61
AC009041.2-204ENST00000568394 HSCBQ8IWL3 235 aa25.08■■□□□ 1.61
AC009041.2-204ENST00000568394 RALGAPBQ86X10 1494 aa25.08■■□□□ 1.61
AC009041.2-204ENST00000568394 RRP9O43818 475 aaKnown RBP25.07■■□□□ 1.6
AC009041.2-204ENST00000568394 GRPEL1Q9HAV7 217 aa25.07■■□□□ 1.6
AC009041.2-204ENST00000568394 MBD5Q9P267 1494 aa25.07■■□□□ 1.6
AC009041.2-204ENST00000568394 NCLP19338 710 aaKnown RBP25.07■■□□□ 1.6
AC009041.2-204ENST00000568394 TESK2Q96S53 571 aa25.07■■□□□ 1.6
AC009041.2-204ENST00000568394 CGNL1Q0VF96 1302 aa25.07■■□□□ 1.6
AC009041.2-204ENST00000568394 CFAP65Q6ZU64 1925 aaKnown RBP25.06■■□□□ 1.6
AC009041.2-204ENST00000568394 MRE11P49959 708 aa25.06■■□□□ 1.6
AC009041.2-204ENST00000568394 CHMP5Q9NZZ3 219 aa25.05■■□□□ 1.6
AC009041.2-204ENST00000568394 E9PSI1 815 aa25.04■■□□□ 1.6
AC009041.2-204ENST00000568394 C22orf23Q9BZE7 217 aa25.04■■□□□ 1.6
AC009041.2-204ENST00000568394 SLC12A5Q9H2X9 1139 aa25.04■■□□□ 1.6
AC009041.2-204ENST00000568394 STAG3Q9UJ98 1225 aa25.04■■□□□ 1.6
AC009041.2-204ENST00000568394 HSP90AB1P08238 724 aaKnown RBP25.03■■□□□ 1.6
AC009041.2-204ENST00000568394 FTSJ3Q8IY81 847 aaKnown RBP25.03■■□□□ 1.6
AC009041.2-204ENST00000568394 FAM135AQ9P2D6 1515 aa25.03■■□□□ 1.6
AC009041.2-204ENST00000568394 ARHGEF12Q9NZN5 1544 aa25.03■■□□□ 1.6
AC009041.2-204ENST00000568394 PCDHB15Q9Y5E8 787 aa25.02■■□□□ 1.6
AC009041.2-204ENST00000568394 NUTM2FA1L443 756 aa25.02■■□□□ 1.6
AC009041.2-204ENST00000568394 RSPH4AQ5TD94 716 aa25.02■■□□□ 1.6
AC009041.2-204ENST00000568394 ANP32BQ92688 251 aaKnown RBP25.02■■□□□ 1.6
AC009041.2-204ENST00000568394 ANTXR1Q9H6X2 564 aa25.02■■□□□ 1.6
AC009041.2-204ENST00000568394 TBC1D32Q96NH3 1257 aa25.01■■□□□ 1.59
AC009041.2-204ENST00000568394 FBLN1P23142 703 aa25■■□□□ 1.59
AC009041.2-204ENST00000568394 TTC37Q6PGP7 1564 aa25■■□□□ 1.59
AC009041.2-204ENST00000568394 PMFBP1Q8TBY8 1022 aa25■■□□□ 1.59
AC009041.2-204ENST00000568394 CDC42BPAQ5VT25 1732 aa24.99■■□□□ 1.59
AC009041.2-204ENST00000568394 BLMP54132 1417 aaPredicted RBP24.98■■□□□ 1.59
AC009041.2-204ENST00000568394 FAM13BQ9NYF5 915 aa24.98■■□□□ 1.59
AC009041.2-204ENST00000568394 ABCA8O94911 1581 aa24.98■■□□□ 1.59
AC009041.2-204ENST00000568394 PLA2R1Q13018 1463 aa24.98■■□□□ 1.59
AC009041.2-204ENST00000568394 RWDD1Q9H446 243 aaPredicted RBP24.97■■□□□ 1.59
AC009041.2-204ENST00000568394 SAMD9LQ8IVG5 1584 aa24.97■■□□□ 1.59
AC009041.2-204ENST00000568394 SOX12O15370 315 aa24.97■■□□□ 1.59
AC009041.2-204ENST00000568394 ERBB4Q15303 1308 aa24.97■■□□□ 1.59
AC009041.2-204ENST00000568394 ERBINQ96RT1 1412 aa24.96■■□□□ 1.59
AC009041.2-204ENST00000568394 RLBP1P12271 317 aa24.96■■□□□ 1.59
AC009041.2-204ENST00000568394 KIAA1211Q6ZU35 1233 aa24.95■■□□□ 1.58
AC009041.2-204ENST00000568394 POLR1AO95602 1720 aaPredicted RBP24.95■■□□□ 1.58
AC009041.2-204ENST00000568394 ZMYM4Q5VZL5 1548 aa24.94■■□□□ 1.58
AC009041.2-204ENST00000568394 CABP2Q9NPB3 220 aa24.94■■□□□ 1.58
AC009041.2-204ENST00000568394 A2MP01023 1474 aa24.94■■□□□ 1.58
AC009041.2-204ENST00000568394 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.93■■□□□ 1.58
AC009041.2-204ENST00000568394 PRAG1Q86YV5 1406 aa24.93■■□□□ 1.58
AC009041.2-204ENST00000568394 ITSN2Q9NZM3 1697 aa24.92■■□□□ 1.58
AC009041.2-204ENST00000568394 PDE3AQ14432 1141 aa24.92■■□□□ 1.58
AC009041.2-204ENST00000568394 CHD1O14646 1710 aa24.92■■□□□ 1.58
AC009041.2-204ENST00000568394 U2SURPO15042 1029 aaKnown RBP24.92■■□□□ 1.58
AC009041.2-204ENST00000568394 MSNP26038 577 aaKnown RBP24.92■■□□□ 1.58
AC009041.2-204ENST00000568394 DDX11L8A8MPP1 907 aa24.91■■□□□ 1.58
AC009041.2-204ENST00000568394 UHRF1BP1Q6BDS2 1440 aa24.91■■□□□ 1.58
AC009041.2-204ENST00000568394 EIF3AQ14152 1382 aaKnown RBP24.91■■□□□ 1.58
AC009041.2-204ENST00000568394 OSCARQ8IYS5 282 aa24.91■■□□□ 1.58
AC009041.2-204ENST00000568394 FSD2A1L4K1 749 aa24.9■■□□□ 1.58
AC009041.2-204ENST00000568394 SRPK2P78362 688 aaKnown RBP24.9■■□□□ 1.58
AC009041.2-204ENST00000568394 ITPRIPQ8IWB1 547 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms