RNA–Protein interactions for RNA: ENST00000568339.5

COX4I1-215, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 2

Gene COX4I1, Length 2,271 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-215ENST00000568339 PRKRIP1Q9H875 184 aaPredicted RBP23.07■■□□□ 1.28
COX4I1-215ENST00000568339 COL17A1Q9UMD9 1497 aaPredicted RBP23.07■■□□□ 1.28
COX4I1-215ENST00000568339 SYNMO15061 1565 aa23.07■■□□□ 1.28
COX4I1-215ENST00000568339 PPLO60437 1756 aa23.06■■□□□ 1.28
COX4I1-215ENST00000568339 CFAP65Q6ZU64 1925 aaKnown RBP23.06■■□□□ 1.28
COX4I1-215ENST00000568339 SCAF11Q99590 1463 aaKnown RBP23.04■■□□□ 1.28
COX4I1-215ENST00000568339 TESK2Q96S53 571 aa23.04■■□□□ 1.28
COX4I1-215ENST00000568339 ARHGEF40Q8TER5 1519 aa23.02■■□□□ 1.28
COX4I1-215ENST00000568339 PPP6R1Q9UPN7 881 aa23.02■■□□□ 1.28
COX4I1-215ENST00000568339 RPGRIP1LQ68CZ1 1315 aa23.01■■□□□ 1.27
COX4I1-215ENST00000568339 PREX1Q8TCU6 1659 aa23.01■■□□□ 1.27
COX4I1-215ENST00000568339 SETBP1Q9Y6X0 1596 aa22.99■■□□□ 1.27
COX4I1-215ENST00000568339 ADGRF5Q8IZF2 1346 aa22.97■■□□□ 1.27
COX4I1-215ENST00000568339 DISP3Q9P2K9 1392 aa22.95■■□□□ 1.27
COX4I1-215ENST00000568339 PIK3C2GO75747 1445 aa22.95■■□□□ 1.26
COX4I1-215ENST00000568339 EIF3AQ14152 1382 aaKnown RBP22.95■■□□□ 1.26
COX4I1-215ENST00000568339 TMF1P82094 1093 aa22.94■■□□□ 1.26
COX4I1-215ENST00000568339 POLR3GLQ9BT43 218 aa22.94■■□□□ 1.26
COX4I1-215ENST00000568339 SLC52A1Q9NWF4 448 aa22.94■■□□□ 1.26
COX4I1-215ENST00000568339 KTN1Q86UP2 1357 aaKnown RBP22.94■■□□□ 1.26
COX4I1-215ENST00000568339 MYO3AQ8NEV4 1616 aa22.93■■□□□ 1.26
COX4I1-215ENST00000568339 NEXMIFQ5QGS0 1516 aa22.93■■□□□ 1.26
COX4I1-215ENST00000568339 BCANQ96GW7 911 aa22.92■■□□□ 1.26
COX4I1-215ENST00000568339 FKBP8Q14318 412 aa22.91■■□□□ 1.26
COX4I1-215ENST00000568339 TMEM131LA2VDJ0 1609 aa22.9■■□□□ 1.26
COX4I1-215ENST00000568339 CLTCQ00610 1675 aaKnown RBP22.9■■□□□ 1.26
COX4I1-215ENST00000568339 ERVK-7P63135 1459 aa22.9■■□□□ 1.26
COX4I1-215ENST00000568339 CFAP70Q5T0N1 1121 aa22.89■■□□□ 1.26
COX4I1-215ENST00000568339 ZFYVE9O95405 1425 aa22.89■■□□□ 1.26
COX4I1-215ENST00000568339 SLC24A1O60721 1099 aa22.88■■□□□ 1.25
COX4I1-215ENST00000568339 CHGAP10645 457 aaKnown RBP22.88■■□□□ 1.25
COX4I1-215ENST00000568339 RBM19Q9Y4C8 960 aaKnown RBP22.88■■□□□ 1.25
COX4I1-215ENST00000568339 ADGRB1O14514 1584 aa22.88■■□□□ 1.25
COX4I1-215ENST00000568339 C14orf93Q9H972 538 aaKnown RBP22.87■■□□□ 1.25
COX4I1-215ENST00000568339 IDI1Q13907 227 aa22.86■■□□□ 1.25
COX4I1-215ENST00000568339 CCDC184Q52MB2 194 aa22.86■■□□□ 1.25
COX4I1-215ENST00000568339 SPATA31D1Q6ZQQ2 1576 aa22.86■■□□□ 1.25
COX4I1-215ENST00000568339 MYO5BQ9ULV0 1848 aa22.85■■□□□ 1.25
COX4I1-215ENST00000568339 CDCA8Q53HL2 280 aa22.85■■□□□ 1.25
COX4I1-215ENST00000568339 SBNO2Q9Y2G9 1366 aa22.85■■□□□ 1.25
COX4I1-215ENST00000568339 PER1O15534 1290 aaPredicted RBP22.84■■□□□ 1.25
COX4I1-215ENST00000568339 MRS2Q9HD23 443 aa22.83■■□□□ 1.25
COX4I1-215ENST00000568339 RALBP1Q15311 655 aa22.83■■□□□ 1.24
COX4I1-215ENST00000568339 VGFO15240 615 aaPredicted RBP22.82■■□□□ 1.24
COX4I1-215ENST00000568339 KDM5AP29375 1690 aaKnown RBP22.82■■□□□ 1.24
COX4I1-215ENST00000568339 MYOM1P52179 1685 aa22.8■■□□□ 1.24
COX4I1-215ENST00000568339 PARD3Q8TEW0 1356 aa22.79■■□□□ 1.24
COX4I1-215ENST00000568339 MYBBP1AQ9BQG0 1328 aaKnown RBP22.76■■□□□ 1.23
COX4I1-215ENST00000568339 FBXO31Q5XUX0 539 aaPredicted RBP22.76■■□□□ 1.23
COX4I1-215ENST00000568339 BRD4O60885 1362 aaPredicted RBP22.75■■□□□ 1.23
COX4I1-215ENST00000568339 PANK3Q9H999 370 aa22.75■■□□□ 1.23
COX4I1-215ENST00000568339 QRICH2Q9H0J4 1663 aa22.74■■□□□ 1.23
COX4I1-215ENST00000568339 ARHGEF28Q8N1W1 1705 aaKnown RBP22.73■■□□□ 1.23
COX4I1-215ENST00000568339 HNRNPUQ00839 825 aaKnown RBP eCLIP22.73■■□□□ 1.23
COX4I1-215ENST00000568339 CENPJQ9HC77 1338 aaPredicted RBP22.71■■□□□ 1.23
COX4I1-215ENST00000568339 MSH5O43196 834 aa22.7■■□□□ 1.22
COX4I1-215ENST00000568339 FAM9BQ8IZU0 186 aa22.69■■□□□ 1.22
COX4I1-215ENST00000568339 A2ML1A8K2U0 1454 aa22.69■■□□□ 1.22
COX4I1-215ENST00000568339 ASXL1Q8IXJ9 1541 aa22.69■■□□□ 1.22
COX4I1-215ENST00000568339 ZMYM3Q14202 1370 aa22.68■■□□□ 1.22
COX4I1-215ENST00000568339 NEFLP07196 543 aa22.68■■□□□ 1.22
COX4I1-215ENST00000568339 MLECQ14165 292 aa22.67■■□□□ 1.22
COX4I1-215ENST00000568339 PNISRQ8TF01 805 aaKnown RBP22.67■■□□□ 1.22
COX4I1-215ENST00000568339 NPC1L1Q9UHC9 1359 aa22.67■■□□□ 1.22
COX4I1-215ENST00000568339 NLRP13Q86W25 1043 aa22.66■■□□□ 1.22
COX4I1-215ENST00000568339 LRPPRCP42704 1394 aaKnown RBP22.66■■□□□ 1.22
COX4I1-215ENST00000568339 ZBED9Q6R2W3 1325 aa22.65■■□□□ 1.22
COX4I1-215ENST00000568339 TMEM132EQ6IEE7 984 aa22.65■■□□□ 1.22
COX4I1-215ENST00000568339 TMC1Q8TDI8 760 aa22.65■■□□□ 1.22
COX4I1-215ENST00000568339 TRAK1Q9UPV9 953 aa22.65■■□□□ 1.22
COX4I1-215ENST00000568339 PUS7Q96PZ0 661 aaKnown RBP22.64■■□□□ 1.21
COX4I1-215ENST00000568339 NUTM2DQ5VT03 806 aaPredicted RBP22.63■■□□□ 1.21
COX4I1-215ENST00000568339 ESF1Q9H501 851 aaKnown RBP22.63■■□□□ 1.21
COX4I1-215ENST00000568339 ALKQ9UM73 1620 aa22.63■■□□□ 1.21
COX4I1-215ENST00000568339 CNGB1Q14028 1251 aaPredicted RBP22.62■■□□□ 1.21
COX4I1-215ENST00000568339 AMER1Q5JTC6 1135 aaPredicted RBP22.61■■□□□ 1.21
COX4I1-215ENST00000568339 KNSTRNQ9Y448 316 aa22.61■■□□□ 1.21
COX4I1-215ENST00000568339 SETD1AO15047 1707 aaKnown RBP22.6■■□□□ 1.21
COX4I1-215ENST00000568339 STAG3Q9UJ98 1225 aa22.6■■□□□ 1.21
COX4I1-215ENST00000568339 RIMS2Q9UQ26 1411 aa22.59■■□□□ 1.21
COX4I1-215ENST00000568339 INSRP06213 1382 aa22.59■■□□□ 1.21
COX4I1-215ENST00000568339 CC2D1BQ5T0F9 858 aaKnown RBP22.58■■□□□ 1.21
COX4I1-215ENST00000568339 PTPRMP28827 1452 aa22.58■■□□□ 1.2
COX4I1-215ENST00000568339 TULP4Q9NRJ4 1543 aa22.57■■□□□ 1.2
COX4I1-215ENST00000568339 YTHDC2Q9H6S0 1430 aaKnown RBP22.57■■□□□ 1.2
COX4I1-215ENST00000568339 TNRQ92752 1358 aa22.56■■□□□ 1.2
COX4I1-215ENST00000568339 FANCIQ9NVI1 1328 aa22.56■■□□□ 1.2
COX4I1-215ENST00000568339 UBR1Q8IWV7 1749 aa22.55■■□□□ 1.2
COX4I1-215ENST00000568339 DLC1Q96QB1 1528 aa22.54■■□□□ 1.2
COX4I1-215ENST00000568339 NRXN3Q9Y4C0 1643 aa22.54■■□□□ 1.2
COX4I1-215ENST00000568339 USP32Q8NFA0 1604 aa22.53■■□□□ 1.2
COX4I1-215ENST00000568339 EVC2Q86UK5 1308 aa22.53■■□□□ 1.2
COX4I1-215ENST00000568339 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.52■■□□□ 1.2
COX4I1-215ENST00000568339 NLRP1Q9C000 1473 aa22.51■■□□□ 1.19
COX4I1-215ENST00000568339 C3P01024 1663 aa22.49■■□□□ 1.19
COX4I1-215ENST00000568339 FER1L4A9Z1Z3 1794 aa22.49■■□□□ 1.19
COX4I1-215ENST00000568339 CARD14Q9BXL6 1004 aa22.48■■□□□ 1.19
COX4I1-215ENST00000568339 PPP2R1AP30153 589 aa22.47■■□□□ 1.19
COX4I1-215ENST00000568339 NINLQ9Y2I6 1382 aa22.47■■□□□ 1.19
COX4I1-215ENST00000568339 TRHP20396 242 aaPredicted RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms