RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 POLR3GLQ9BT43 218 aa10.17□□□□□ -0.78
ATXN3-250ENST00000568290 C11orf95C9JLR9 678 aaPredicted RBP10.16□□□□□ -0.78
ATXN3-250ENST00000568290 NGEFQ8N5V2 710 aa10.16□□□□□ -0.78
ATXN3-250ENST00000568290 PNISRQ8TF01 805 aaKnown RBP10.16□□□□□ -0.78
ATXN3-250ENST00000568290 UNC13BO14795 1591 aa10.15□□□□□ -0.78
ATXN3-250ENST00000568290 CD44P16070 742 aaKnown RBP10.15□□□□□ -0.78
ATXN3-250ENST00000568290 ARHGAP5Q13017 1502 aa10.15□□□□□ -0.78
ATXN3-250ENST00000568290 LRPPRCP42704 1394 aaKnown RBP10.14□□□□□ -0.79
ATXN3-250ENST00000568290 EIF3AQ14152 1382 aaKnown RBP10.14□□□□□ -0.79
ATXN3-250ENST00000568290 ST20-MTHFSA0A0A6YYL1 179 aa10.14□□□□□ -0.79
ATXN3-250ENST00000568290 CHRM1P11229 460 aaPredicted RBP10.14□□□□□ -0.79
ATXN3-250ENST00000568290 HNRNPMP52272 730 aaKnown RBP eCLIP10.14□□□□□ -0.79
ATXN3-250ENST00000568290 DCAF8Q5TAQ9 597 aa10.14□□□□□ -0.79
ATXN3-250ENST00000568290 PRAG1Q86YV5 1406 aa10.14□□□□□ -0.79
ATXN3-250ENST00000568290 KANK1Q14678 1352 aa10.14□□□□□ -0.79
ATXN3-250ENST00000568290 ARAP3Q8WWN8 1544 aa10.13□□□□□ -0.79
ATXN3-250ENST00000568290 EVX2Q03828 476 aa10.13□□□□□ -0.79
ATXN3-250ENST00000568290 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.13□□□□□ -0.79
ATXN3-250ENST00000568290 CIZ1Q9ULV3 898 aaPredicted RBP10.13□□□□□ -0.79
ATXN3-250ENST00000568290 RTEL1-TNFRSF6BF6WH68 1400 aa10.13□□□□□ -0.79
ATXN3-250ENST00000568290 ABCC2Q92887 1545 aa10.12□□□□□ -0.79
ATXN3-250ENST00000568290 UHRF1BP1LA0JNW5 1464 aa10.12□□□□□ -0.79
ATXN3-250ENST00000568290 TSPYL2Q9H2G4 693 aaPredicted RBP10.12□□□□□ -0.79
ATXN3-250ENST00000568290 KDM2AQ9Y2K7 1162 aa10.12□□□□□ -0.79
ATXN3-250ENST00000568290 IQGAP3Q86VI3 1631 aa10.11□□□□□ -0.79
ATXN3-250ENST00000568290 TCERG1O14776 1098 aaKnown RBP10.11□□□□□ -0.79
ATXN3-250ENST00000568290 PARD3Q8TEW0 1356 aa10.11□□□□□ -0.79
ATXN3-250ENST00000568290 MYO5CQ9NQX4 1742 aa10.1□□□□□ -0.79
ATXN3-250ENST00000568290 SAMD9LQ8IVG5 1584 aa10.1□□□□□ -0.79
ATXN3-250ENST00000568290 PLCH2O75038 1416 aa10.1□□□□□ -0.79
ATXN3-250ENST00000568290 MS4A1P11836 297 aa10.1□□□□□ -0.79
ATXN3-250ENST00000568290 SHROOM2Q13796 1616 aa10.1□□□□□ -0.79
ATXN3-250ENST00000568290 SCAPERQ9BY12 1400 aa10.09□□□□□ -0.79
ATXN3-250ENST00000568290 ZNF579Q8NAF0 562 aaKnown RBP10.09□□□□□ -0.79
ATXN3-250ENST00000568290 RNF25Q96BH1 459 aaPredicted RBP10.09□□□□□ -0.79
ATXN3-250ENST00000568290 MAGI2Q86UL8 1455 aa10.09□□□□□ -0.79
ATXN3-250ENST00000568290 COL17A1Q9UMD9 1497 aaPredicted RBP10.09□□□□□ -0.79
ATXN3-250ENST00000568290 WDR7Q9Y4E6 1490 aa10.09□□□□□ -0.79
ATXN3-250ENST00000568290 TRPM1Q7Z4N2 1603 aa10.08□□□□□ -0.8
ATXN3-250ENST00000568290 ECM2O94769 699 aaPredicted RBP10.08□□□□□ -0.8
ATXN3-250ENST00000568290 CCDC184Q52MB2 194 aa10.08□□□□□ -0.8
ATXN3-250ENST00000568290 ZRANB1Q9UGI0 708 aa10.08□□□□□ -0.8
ATXN3-250ENST00000568290 RCAN3Q9UKA8 241 aa10.08□□□□□ -0.8
ATXN3-250ENST00000568290 KNSTRNQ9Y448 316 aa10.08□□□□□ -0.8
ATXN3-250ENST00000568290 PRDM15P57071 1507 aaPredicted RBP10.07□□□□□ -0.8
ATXN3-250ENST00000568290 SYCP2Q9BX26 1530 aa10.07□□□□□ -0.8
ATXN3-250ENST00000568290 BCORL1Q5H9F3 1711 aa10.07□□□□□ -0.8
ATXN3-250ENST00000568290 CDC42BPBQ9Y5S2 1711 aa10.07□□□□□ -0.8
ATXN3-250ENST00000568290 NEURL4Q96JN8 1562 aa10.07□□□□□ -0.8
ATXN3-250ENST00000568290 RRP1P56182 461 aaKnown RBP10.07□□□□□ -0.8
ATXN3-250ENST00000568290 IRX6P78412 446 aaPredicted RBP10.07□□□□□ -0.8
ATXN3-250ENST00000568290 E9PCH4 1651 aa10.06□□□□□ -0.8
ATXN3-250ENST00000568290 NPC1L1Q9UHC9 1359 aa10.06□□□□□ -0.8
ATXN3-250ENST00000568290 RGL2O15211 777 aa10.06□□□□□ -0.8
ATXN3-250ENST00000568290 PAK3O75914 559 aaPredicted RBP10.06□□□□□ -0.8
ATXN3-250ENST00000568290 WDR43Q15061 677 aaKnown RBP eCLIP10.06□□□□□ -0.8
ATXN3-250ENST00000568290 B4GALNT3Q6L9W6 998 aa10.06□□□□□ -0.8
ATXN3-250ENST00000568290 KIF12Q96FN5 646 aa10.06□□□□□ -0.8
ATXN3-250ENST00000568290 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.06□□□□□ -0.8
ATXN3-250ENST00000568290 SPAG9O60271 1321 aaKnown RBP10.06□□□□□ -0.8
ATXN3-250ENST00000568290 PYGBP11216 843 aa10.05□□□□□ -0.8
ATXN3-250ENST00000568290 RTL5Q5HYW3 569 aaPredicted RBP10.05□□□□□ -0.8
ATXN3-250ENST00000568290 DDRGK1Q96HY6 314 aa10.05□□□□□ -0.8
ATXN3-250ENST00000568290 NOP58Q9Y2X3 529 aaKnown RBP10.05□□□□□ -0.8
ATXN3-250ENST00000568290 HAX1O00165 279 aa10.04□□□□□ -0.8
ATXN3-250ENST00000568290 A2MP01023 1474 aa10.04□□□□□ -0.8
ATXN3-250ENST00000568290 AAMPQ13685 434 aa10.03□□□□□ -0.8
ATXN3-250ENST00000568290 RGL3Q3MIN7 710 aa10.03□□□□□ -0.8
ATXN3-250ENST00000568290 IPO9Q96P70 1041 aaKnown RBP10.03□□□□□ -0.8
ATXN3-250ENST00000568290 SCAF11Q99590 1463 aaKnown RBP10.03□□□□□ -0.8
ATXN3-250ENST00000568290 BLMP54132 1417 aaPredicted RBP10.02□□□□□ -0.81
ATXN3-250ENST00000568290 PHF12Q96QT6 1004 aa10.02□□□□□ -0.81
ATXN3-250ENST00000568290 PER1O15534 1290 aaPredicted RBP10.01□□□□□ -0.81
ATXN3-250ENST00000568290 SGIP1Q9BQI5 828 aa10.01□□□□□ -0.81
ATXN3-250ENST00000568290 USP35Q9P2H5 1018 aa10.01□□□□□ -0.81
ATXN3-250ENST00000568290 TRPM2O94759 1503 aa10.01□□□□□ -0.81
ATXN3-250ENST00000568290 ABCC1P33527 1531 aa10.01□□□□□ -0.81
ATXN3-250ENST00000568290 PANK3Q9H999 370 aa10□□□□□ -0.81
ATXN3-250ENST00000568290 DAXXQ9UER7 740 aaPredicted RBP10□□□□□ -0.81
ATXN3-250ENST00000568290 TTC37Q6PGP7 1564 aa10□□□□□ -0.81
ATXN3-250ENST00000568290 NINLQ9Y2I6 1382 aa10□□□□□ -0.81
ATXN3-250ENST00000568290 PTPRTO14522 1441 aa9.99□□□□□ -0.81
ATXN3-250ENST00000568290 PIK3C2GO75747 1445 aa9.99□□□□□ -0.81
ATXN3-250ENST00000568290 KIAA1210Q9ULL0 1709 aa9.99□□□□□ -0.81
ATXN3-250ENST00000568290 PPM1GO15355 546 aaPredicted RBP9.99□□□□□ -0.81
ATXN3-250ENST00000568290 MAP3K13O43283 966 aa9.99□□□□□ -0.81
ATXN3-250ENST00000568290 TESK2Q96S53 571 aa9.99□□□□□ -0.81
ATXN3-250ENST00000568290 SYNMO15061 1565 aa9.99□□□□□ -0.81
ATXN3-250ENST00000568290 RNF17Q9BXT8 1623 aaKnown RBP9.99□□□□□ -0.81
ATXN3-250ENST00000568290 CHD1O14646 1710 aa9.99□□□□□ -0.81
ATXN3-250ENST00000568290 PLA2R1Q13018 1463 aa9.98□□□□□ -0.81
ATXN3-250ENST00000568290 TET3O43151 1660 aa9.97□□□□□ -0.81
ATXN3-250ENST00000568290 GOLGA2Q08379 1002 aa9.97□□□□□ -0.81
ATXN3-250ENST00000568290 PUS7Q96PZ0 661 aaKnown RBP9.97□□□□□ -0.81
ATXN3-250ENST00000568290 RIOK3O14730 519 aaKnown RBP9.96□□□□□ -0.82
ATXN3-250ENST00000568290 CENPQQ7L2Z9 268 aaPredicted RBP9.96□□□□□ -0.82
ATXN3-250ENST00000568290 RPGRIP1LQ68CZ1 1315 aa9.96□□□□□ -0.82
ATXN3-250ENST00000568290 SBNO2Q9Y2G9 1366 aa9.96□□□□□ -0.82
ATXN3-250ENST00000568290 MYOM2P54296 1465 aa9.96□□□□□ -0.82
ATXN3-250ENST00000568290 CLASP1Q7Z460 1538 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms