RNA–Protein interactions for RNA: ENST00000568176.5

EDC3-214, Transcript of enhancer of mRNA decapping 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC3, Length 1,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-214ENST00000568176 NUTM2DQ5VT03 806 aaPredicted RBP26.49■■□□□ 1.83
EDC3-214ENST00000568176 TRPM1Q7Z4N2 1603 aa26.49■■□□□ 1.83
EDC3-214ENST00000568176 KDM5AP29375 1690 aaKnown RBP26.48■■□□□ 1.83
EDC3-214ENST00000568176 RPGRIP1LQ68CZ1 1315 aa26.48■■□□□ 1.83
EDC3-214ENST00000568176 NRXN1Q9ULB1 1477 aa26.46■■□□□ 1.83
EDC3-214ENST00000568176 RALGAPBQ86X10 1494 aa26.46■■□□□ 1.83
EDC3-214ENST00000568176 STAC3Q96MF2 364 aa26.44■■□□□ 1.82
EDC3-214ENST00000568176 SETD1BQ9UPS6 1966 aaKnown RBP26.43■■□□□ 1.82
EDC3-214ENST00000568176 NBPF1Q3BBV0 1214 aa26.42■■□□□ 1.82
EDC3-214ENST00000568176 CEP170BQ9Y4F5 1589 aaPredicted RBP26.42■■□□□ 1.82
EDC3-214ENST00000568176 ZFYVE9O95405 1425 aa26.42■■□□□ 1.82
EDC3-214ENST00000568176 RIMS2Q9UQ26 1411 aa26.41■■□□□ 1.82
EDC3-214ENST00000568176 PIK3C2GO75747 1445 aa26.4■■□□□ 1.82
EDC3-214ENST00000568176 ZNF142P52746 1687 aaPredicted RBP26.39■■□□□ 1.81
EDC3-214ENST00000568176 SENP3Q9H4L4 574 aaPredicted RBP26.38■■□□□ 1.81
EDC3-214ENST00000568176 VGFO15240 615 aaPredicted RBP26.37■■□□□ 1.81
EDC3-214ENST00000568176 TMEM2Q9UHN6 1383 aa26.37■■□□□ 1.81
EDC3-214ENST00000568176 ROCK2O75116 1388 aaKnown RBP26.36■■□□□ 1.81
EDC3-214ENST00000568176 CFAP70Q5T0N1 1121 aa26.36■■□□□ 1.81
EDC3-214ENST00000568176 KIAA1210Q9ULL0 1709 aa26.36■■□□□ 1.81
EDC3-214ENST00000568176 HIRIP3Q9BW71 556 aaPredicted RBP26.35■■□□□ 1.81
EDC3-214ENST00000568176 GPRASP1Q5JY77 1395 aa26.33■■□□□ 1.81
EDC3-214ENST00000568176 ARHGAP23Q9P227 1491 aa26.32■■□□□ 1.8
EDC3-214ENST00000568176 SLIT1O75093 1534 aa26.32■■□□□ 1.8
EDC3-214ENST00000568176 CARD11Q9BXL7 1154 aa26.32■■□□□ 1.8
EDC3-214ENST00000568176 LTKP29376 864 aa26.31■■□□□ 1.8
EDC3-214ENST00000568176 HSPA5P11021 654 aaKnown RBP26.3■■□□□ 1.8
EDC3-214ENST00000568176 C14orf93Q9H972 538 aaKnown RBP26.3■■□□□ 1.8
EDC3-214ENST00000568176 LAMC1P11047 1609 aa26.29■■□□□ 1.8
EDC3-214ENST00000568176 ZNF316A6NFI3 1004 aaPredicted RBP26.29■■□□□ 1.8
EDC3-214ENST00000568176 THEMISQ8N1K5 641 aaPredicted RBP26.29■■□□□ 1.8
EDC3-214ENST00000568176 NRXN3Q9Y4C0 1643 aa26.28■■□□□ 1.8
EDC3-214ENST00000568176 USP47Q96K76 1375 aa26.27■■□□□ 1.8
EDC3-214ENST00000568176 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.27■■□□□ 1.8
EDC3-214ENST00000568176 EIF4G2P78344 907 aaKnown RBP eCLIP26.26■■□□□ 1.79
EDC3-214ENST00000568176 ADGRB1O14514 1584 aa26.26■■□□□ 1.79
EDC3-214ENST00000568176 IQGAP1P46940 1657 aa26.25■■□□□ 1.79
EDC3-214ENST00000568176 TXNDC2Q86VQ3 553 aa26.25■■□□□ 1.79
EDC3-214ENST00000568176 ALKQ9UM73 1620 aa26.25■■□□□ 1.79
EDC3-214ENST00000568176 ASXL1Q8IXJ9 1541 aa26.24■■□□□ 1.79
EDC3-214ENST00000568176 SETD1AO15047 1707 aaKnown RBP26.24■■□□□ 1.79
EDC3-214ENST00000568176 SETBP1Q9Y6X0 1596 aa26.24■■□□□ 1.79
EDC3-214ENST00000568176 TMEM132EQ6IEE7 984 aa26.23■■□□□ 1.79
EDC3-214ENST00000568176 HDGFP51858 240 aaKnown RBP26.21■■□□□ 1.79
EDC3-214ENST00000568176 SCAF11Q99590 1463 aaKnown RBP26.2■■□□□ 1.78
EDC3-214ENST00000568176 EID1Q9Y6B2 187 aa26.19■■□□□ 1.78
EDC3-214ENST00000568176 PLEKHG1Q9ULL1 1385 aa26.18■■□□□ 1.78
EDC3-214ENST00000568176 ADAMTS13Q76LX8 1427 aa26.17■■□□□ 1.78
EDC3-214ENST00000568176 ST20-MTHFSA0A0A6YYL1 179 aa26.16■■□□□ 1.78
EDC3-214ENST00000568176 BCANQ96GW7 911 aa26.12■■□□□ 1.77
EDC3-214ENST00000568176 METP08581 1390 aa26.12■■□□□ 1.77
EDC3-214ENST00000568176 MED14O60244 1454 aa26.12■■□□□ 1.77
EDC3-214ENST00000568176 LMTK3Q96Q04 1460 aa26.12■■□□□ 1.77
EDC3-214ENST00000568176 C11orf95C9JLR9 678 aaPredicted RBP26.11■■□□□ 1.77
EDC3-214ENST00000568176 ANKLE2Q86XL3 938 aa26.11■■□□□ 1.77
EDC3-214ENST00000568176 POLR1AO95602 1720 aaPredicted RBP26.1■■□□□ 1.77
EDC3-214ENST00000568176 TRAK1Q9UPV9 953 aa26.1■■□□□ 1.77
EDC3-214ENST00000568176 SLC26A8Q96RN1 970 aa26.09■■□□□ 1.77
EDC3-214ENST00000568176 HSPA2P54652 639 aa26.09■■□□□ 1.77
EDC3-214ENST00000568176 YTHDC2Q9H6S0 1430 aaKnown RBP26.09■■□□□ 1.77
EDC3-214ENST00000568176 ARHGEF28Q8N1W1 1705 aaKnown RBP26.08■■□□□ 1.77
EDC3-214ENST00000568176 STK26Q9P289 416 aa26.07■■□□□ 1.76
EDC3-214ENST00000568176 NCKAP5LQ9HCH0 1330 aa26.07■■□□□ 1.76
EDC3-214ENST00000568176 TESK2Q96S53 571 aa26.07■■□□□ 1.76
EDC3-214ENST00000568176 WASHC2AQ641Q2 1341 aa26.03■■□□□ 1.76
EDC3-214ENST00000568176 EIF3AQ14152 1382 aaKnown RBP26.02■■□□□ 1.76
EDC3-214ENST00000568176 LRPPRCP42704 1394 aaKnown RBP26.02■■□□□ 1.76
EDC3-214ENST00000568176 NPHP4O75161 1426 aaPredicted RBP26.01■■□□□ 1.75
EDC3-214ENST00000568176 DIP2AQ14689 1571 aa26.01■■□□□ 1.75
EDC3-214ENST00000568176 PTPRUQ92729 1446 aa26.01■■□□□ 1.75
EDC3-214ENST00000568176 TBX22Q9Y458 520 aa26.01■■□□□ 1.75
EDC3-214ENST00000568176 QRICH2Q9H0J4 1663 aa26■■□□□ 1.75
EDC3-214ENST00000568176 ABCC11Q96J66 1382 aa25.98■■□□□ 1.75
EDC3-214ENST00000568176 DISP3Q9P2K9 1392 aa25.98■■□□□ 1.75
EDC3-214ENST00000568176 KIF7Q2M1P5 1343 aa25.98■■□□□ 1.75
EDC3-214ENST00000568176 CENPJQ9HC77 1338 aaPredicted RBP25.98■■□□□ 1.75
EDC3-214ENST00000568176 KNDC1Q76NI1 1749 aa25.97■■□□□ 1.75
EDC3-214ENST00000568176 CCDC7Q96M83 1385 aa25.97■■□□□ 1.75
EDC3-214ENST00000568176 STRCQ7RTU9 1775 aa25.96■■□□□ 1.75
EDC3-214ENST00000568176 DLC1Q96QB1 1528 aa25.96■■□□□ 1.75
EDC3-214ENST00000568176 PRAM1Q96QH2 718 aa25.95■■□□□ 1.74
EDC3-214ENST00000568176 PLEKHH1Q9ULM0 1364 aa25.95■■□□□ 1.74
EDC3-214ENST00000568176 TECPR2O15040 1411 aa25.94■■□□□ 1.74
EDC3-214ENST00000568176 SAFB2Q14151 953 aaKnown RBP eCLIP25.94■■□□□ 1.74
EDC3-214ENST00000568176 CPS1P31327 1500 aa25.93■■□□□ 1.74
EDC3-214ENST00000568176 WAPLQ7Z5K2 1190 aa25.93■■□□□ 1.74
EDC3-214ENST00000568176 XRN1Q8IZH2 1706 aaKnown RBP25.92■■□□□ 1.74
EDC3-214ENST00000568176 ROBO2Q9HCK4 1378 aa25.91■■□□□ 1.74
EDC3-214ENST00000568176 DDX10Q13206 875 aaKnown RBP25.91■■□□□ 1.74
EDC3-214ENST00000568176 CHD2O14647 1828 aaKnown RBP25.91■■□□□ 1.74
EDC3-214ENST00000568176 SBNO2Q9Y2G9 1366 aa25.91■■□□□ 1.74
EDC3-214ENST00000568176 AMOTL2Q9Y2J4 779 aa25.91■■□□□ 1.74
EDC3-214ENST00000568176 POLR3GLQ9BT43 218 aa25.88■■□□□ 1.73
EDC3-214ENST00000568176 TMF1P82094 1093 aa25.88■■□□□ 1.73
EDC3-214ENST00000568176 POGKQ9P215 609 aa25.88■■□□□ 1.73
EDC3-214ENST00000568176 PIK3R4Q99570 1358 aa25.87■■□□□ 1.73
EDC3-214ENST00000568176 FAM135BQ49AJ0 1406 aa25.86■■□□□ 1.73
EDC3-214ENST00000568176 TULP4Q9NRJ4 1543 aa25.86■■□□□ 1.73
EDC3-214ENST00000568176 DIEXFQ68CQ4 756 aaKnown RBP25.86■■□□□ 1.73
EDC3-214ENST00000568176 MINK1Q8N4C8 1332 aaPredicted RBP25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms