RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 ARHGAP31Q2M1Z3 1444 aa24.2■■□□□ 1.46
CMTM3-214ENST00000567572 NOS1P29475 1434 aa24.18■■□□□ 1.46
CMTM3-214ENST00000567572 KIAA1210Q9ULL0 1709 aa24.18■■□□□ 1.46
CMTM3-214ENST00000567572 CCDC184Q52MB2 194 aa24.18■■□□□ 1.46
CMTM3-214ENST00000567572 AGLP35573 1532 aa24.16■■□□□ 1.46
CMTM3-214ENST00000567572 PIK3C2BO00750 1634 aa24.16■■□□□ 1.46
CMTM3-214ENST00000567572 IQGAP1P46940 1657 aa24.16■■□□□ 1.46
CMTM3-214ENST00000567572 SYNMO15061 1565 aa24.14■■□□□ 1.46
CMTM3-214ENST00000567572 COL17A1Q9UMD9 1497 aaPredicted RBP24.14■■□□□ 1.45
CMTM3-214ENST00000567572 NRXN1Q9ULB1 1477 aa24.13■■□□□ 1.45
CMTM3-214ENST00000567572 CFAP65Q6ZU64 1925 aaKnown RBP24.13■■□□□ 1.45
CMTM3-214ENST00000567572 ARHGEF40Q8TER5 1519 aa24.12■■□□□ 1.45
CMTM3-214ENST00000567572 FAM9BQ8IZU0 186 aa24.1■■□□□ 1.45
CMTM3-214ENST00000567572 PPLO60437 1756 aa24.09■■□□□ 1.45
CMTM3-214ENST00000567572 TESK2Q96S53 571 aa24.09■■□□□ 1.45
CMTM3-214ENST00000567572 SCAF11Q99590 1463 aaKnown RBP24.07■■□□□ 1.44
CMTM3-214ENST00000567572 PREX1Q8TCU6 1659 aa24.07■■□□□ 1.44
CMTM3-214ENST00000567572 POLR3GLQ9BT43 218 aa24.06■■□□□ 1.44
CMTM3-214ENST00000567572 ADGRF5Q8IZF2 1346 aa24.05■■□□□ 1.44
CMTM3-214ENST00000567572 SMG6Q86US8 1419 aaKnown RBP24.04■■□□□ 1.44
CMTM3-214ENST00000567572 DISP3Q9P2K9 1392 aa24.03■■□□□ 1.44
CMTM3-214ENST00000567572 PPP6R1Q9UPN7 881 aa24.02■■□□□ 1.44
CMTM3-214ENST00000567572 RALBP1Q15311 655 aa24.02■■□□□ 1.44
CMTM3-214ENST00000567572 RPGRIP1LQ68CZ1 1315 aa24.02■■□□□ 1.43
CMTM3-214ENST00000567572 BRD4O60885 1362 aaPredicted RBP24.01■■□□□ 1.43
CMTM3-214ENST00000567572 PIK3C2GO75747 1445 aa24■■□□□ 1.43
CMTM3-214ENST00000567572 CHGAP10645 457 aaKnown RBP24■■□□□ 1.43
CMTM3-214ENST00000567572 PPP4R2Q9NY27 417 aa24■■□□□ 1.43
CMTM3-214ENST00000567572 SETBP1Q9Y6X0 1596 aa23.99■■□□□ 1.43
CMTM3-214ENST00000567572 NEXMIFQ5QGS0 1516 aa23.98■■□□□ 1.43
CMTM3-214ENST00000567572 CLTCQ00610 1675 aaKnown RBP23.97■■□□□ 1.43
CMTM3-214ENST00000567572 ERVK-7P63135 1459 aa23.97■■□□□ 1.43
CMTM3-214ENST00000567572 CFAP70Q5T0N1 1121 aa23.97■■□□□ 1.43
CMTM3-214ENST00000567572 SLC52A1Q9NWF4 448 aa23.97■■□□□ 1.43
CMTM3-214ENST00000567572 EIF3AQ14152 1382 aaKnown RBP23.96■■□□□ 1.43
CMTM3-214ENST00000567572 MYBBP1AQ9BQG0 1328 aaKnown RBP23.96■■□□□ 1.43
CMTM3-214ENST00000567572 TMF1P82094 1093 aa23.96■■□□□ 1.43
CMTM3-214ENST00000567572 LRPPRCP42704 1394 aaKnown RBP23.96■■□□□ 1.43
CMTM3-214ENST00000567572 TMEM131LA2VDJ0 1609 aa23.95■■□□□ 1.42
CMTM3-214ENST00000567572 IDI1Q13907 227 aa23.94■■□□□ 1.42
CMTM3-214ENST00000567572 PNISRQ8TF01 805 aaKnown RBP23.94■■□□□ 1.42
CMTM3-214ENST00000567572 MYO3AQ8NEV4 1616 aa23.93■■□□□ 1.42
CMTM3-214ENST00000567572 TMC1Q8TDI8 760 aa23.92■■□□□ 1.42
CMTM3-214ENST00000567572 ADGRB1O14514 1584 aa23.91■■□□□ 1.42
CMTM3-214ENST00000567572 NUDCQ9Y266 331 aa23.91■■□□□ 1.42
CMTM3-214ENST00000567572 MYO5BQ9ULV0 1848 aa23.9■■□□□ 1.42
CMTM3-214ENST00000567572 PARD3Q8TEW0 1356 aa23.9■■□□□ 1.42
CMTM3-214ENST00000567572 SPATA31D1Q6ZQQ2 1576 aa23.9■■□□□ 1.42
CMTM3-214ENST00000567572 INSRP06213 1382 aa23.9■■□□□ 1.42
CMTM3-214ENST00000567572 RBM19Q9Y4C8 960 aaKnown RBP23.9■■□□□ 1.42
CMTM3-214ENST00000567572 ZFYVE9O95405 1425 aa23.89■■□□□ 1.42
CMTM3-214ENST00000567572 C14orf93Q9H972 538 aaKnown RBP23.89■■□□□ 1.42
CMTM3-214ENST00000567572 RNF123Q5XPI4 1314 aa23.89■■□□□ 1.41
CMTM3-214ENST00000567572 FBXO31Q5XUX0 539 aaPredicted RBP23.88■■□□□ 1.41
CMTM3-214ENST00000567572 VGFO15240 615 aaPredicted RBP23.86■■□□□ 1.41
CMTM3-214ENST00000567572 NLRP13Q86W25 1043 aa23.84■■□□□ 1.41
CMTM3-214ENST00000567572 SBNO2Q9Y2G9 1366 aa23.84■■□□□ 1.41
CMTM3-214ENST00000567572 PER1O15534 1290 aaPredicted RBP23.84■■□□□ 1.41
CMTM3-214ENST00000567572 IRX6P78412 446 aaPredicted RBP23.84■■□□□ 1.41
CMTM3-214ENST00000567572 CDCA8Q53HL2 280 aa23.84■■□□□ 1.41
CMTM3-214ENST00000567572 KDM5AP29375 1690 aaKnown RBP23.82■■□□□ 1.4
CMTM3-214ENST00000567572 MYOM1P52179 1685 aa23.82■■□□□ 1.4
CMTM3-214ENST00000567572 MLECQ14165 292 aa23.82■■□□□ 1.4
CMTM3-214ENST00000567572 SLC24A1O60721 1099 aa23.81■■□□□ 1.4
CMTM3-214ENST00000567572 PANK3Q9H999 370 aa23.78■■□□□ 1.4
CMTM3-214ENST00000567572 QRICH2Q9H0J4 1663 aa23.77■■□□□ 1.4
CMTM3-214ENST00000567572 NUTM2DQ5VT03 806 aaPredicted RBP23.77■■□□□ 1.4
CMTM3-214ENST00000567572 ANP32EQ9BTT0 268 aa23.76■■□□□ 1.39
CMTM3-214ENST00000567572 CENPJQ9HC77 1338 aaPredicted RBP23.76■■□□□ 1.39
CMTM3-214ENST00000567572 A2ML1A8K2U0 1454 aa23.76■■□□□ 1.39
CMTM3-214ENST00000567572 CNGB1Q14028 1251 aaPredicted RBP23.76■■□□□ 1.39
CMTM3-214ENST00000567572 ZMYM3Q14202 1370 aa23.76■■□□□ 1.39
CMTM3-214ENST00000567572 FANCIQ9NVI1 1328 aa23.75■■□□□ 1.39
CMTM3-214ENST00000567572 ASXL1Q8IXJ9 1541 aa23.75■■□□□ 1.39
CMTM3-214ENST00000567572 ARHGEF28Q8N1W1 1705 aaKnown RBP23.75■■□□□ 1.39
CMTM3-214ENST00000567572 PDE3BQ13370 1112 aa23.74■■□□□ 1.39
CMTM3-214ENST00000567572 TMEM132EQ6IEE7 984 aa23.73■■□□□ 1.39
CMTM3-214ENST00000567572 TRAK1Q9UPV9 953 aa23.72■■□□□ 1.39
CMTM3-214ENST00000567572 ESF1Q9H501 851 aaKnown RBP23.72■■□□□ 1.39
CMTM3-214ENST00000567572 BLMP54132 1417 aaPredicted RBP23.69■■□□□ 1.38
CMTM3-214ENST00000567572 STAG3Q9UJ98 1225 aa23.68■■□□□ 1.38
CMTM3-214ENST00000567572 ALKQ9UM73 1620 aa23.67■■□□□ 1.38
CMTM3-214ENST00000567572 RIMS2Q9UQ26 1411 aa23.66■■□□□ 1.38
CMTM3-214ENST00000567572 TRHP20396 242 aaPredicted RBP23.65■■□□□ 1.38
CMTM3-214ENST00000567572 TNRQ92752 1358 aa23.64■■□□□ 1.37
CMTM3-214ENST00000567572 B4GALNT3Q6L9W6 998 aa23.64■■□□□ 1.37
CMTM3-214ENST00000567572 CC2D1BQ5T0F9 858 aaKnown RBP23.63■■□□□ 1.37
CMTM3-214ENST00000567572 KNSTRNQ9Y448 316 aa23.63■■□□□ 1.37
CMTM3-214ENST00000567572 SETD1AO15047 1707 aaKnown RBP23.62■■□□□ 1.37
CMTM3-214ENST00000567572 NPC1L1Q9UHC9 1359 aa23.62■■□□□ 1.37
CMTM3-214ENST00000567572 AMER1Q5JTC6 1135 aaPredicted RBP23.62■■□□□ 1.37
CMTM3-214ENST00000567572 PTPRMP28827 1452 aa23.62■■□□□ 1.37
CMTM3-214ENST00000567572 TULP4Q9NRJ4 1543 aa23.61■■□□□ 1.37
CMTM3-214ENST00000567572 YTHDC2Q9H6S0 1430 aaKnown RBP23.61■■□□□ 1.37
CMTM3-214ENST00000567572 UBR1Q8IWV7 1749 aa23.59■■□□□ 1.37
CMTM3-214ENST00000567572 NRXN3Q9Y4C0 1643 aa23.58■■□□□ 1.36
CMTM3-214ENST00000567572 PUS7Q96PZ0 661 aaKnown RBP23.57■■□□□ 1.36
CMTM3-214ENST00000567572 FER1L4A9Z1Z3 1794 aa23.56■■□□□ 1.36
CMTM3-214ENST00000567572 C3P01024 1663 aa23.55■■□□□ 1.36
CMTM3-214ENST00000567572 RRP1P56182 461 aaKnown RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms