RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 MSH5O43196 834 aa15.82■□□□□ 0.12
CAPN3-216ENST00000567071 CEP152O94986 1710 aa15.81■□□□□ 0.12
CAPN3-216ENST00000567071 CAMSAP2Q08AD1 1489 aa15.81■□□□□ 0.12
CAPN3-216ENST00000567071 CADPS2Q86UW7 1296 aa15.81■□□□□ 0.12
CAPN3-216ENST00000567071 PIK3C2BO00750 1634 aa15.8■□□□□ 0.12
CAPN3-216ENST00000567071 LRP5O75197 1615 aa15.8■□□□□ 0.12
CAPN3-216ENST00000567071 ATF3P18847 181 aa15.8■□□□□ 0.12
CAPN3-216ENST00000567071 TET3O43151 1660 aa15.79■□□□□ 0.12
CAPN3-216ENST00000567071 EFCAB6Q5THR3 1501 aa15.79■□□□□ 0.12
CAPN3-216ENST00000567071 NCOA3Q9Y6Q9 1424 aa15.79■□□□□ 0.12
CAPN3-216ENST00000567071 TSPY4P0CV99 314 aa15.79■□□□□ 0.12
CAPN3-216ENST00000567071 TSPY10P0CW01 314 aa15.79■□□□□ 0.12
CAPN3-216ENST00000567071 EIF2AK4Q9P2K8 1649 aaKnown RBP15.78■□□□□ 0.12
CAPN3-216ENST00000567071 DIP2AQ14689 1571 aa15.78■□□□□ 0.12
CAPN3-216ENST00000567071 EP400Q96L91 3159 aa15.76■□□□□ 0.11
CAPN3-216ENST00000567071 CHD2O14647 1828 aaKnown RBP15.75■□□□□ 0.11
CAPN3-216ENST00000567071 LRRC59Q96AG4 307 aaKnown RBP15.74■□□□□ 0.11
CAPN3-216ENST00000567071 C19orf44Q9H6X5 657 aa15.74■□□□□ 0.11
CAPN3-216ENST00000567071 ARHGAP31Q2M1Z3 1444 aa15.74■□□□□ 0.11
CAPN3-216ENST00000567071 SETD5Q9C0A6 1442 aa15.73■□□□□ 0.11
CAPN3-216ENST00000567071 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.73■□□□□ 0.11
CAPN3-216ENST00000567071 BRINP3Q76B58 766 aa15.72■□□□□ 0.11
CAPN3-216ENST00000567071 TRPC5Q9UL62 973 aaPredicted RBP15.72■□□□□ 0.11
CAPN3-216ENST00000567071 MROH1Q8NDA8 1641 aa15.71■□□□□ 0.11
CAPN3-216ENST00000567071 ARHGEF5Q12774 1597 aa15.7■□□□□ 0.1
CAPN3-216ENST00000567071 EHBP1L1Q8N3D4 1523 aa15.69■□□□□ 0.1
CAPN3-216ENST00000567071 USP21Q9UK80 565 aa15.69■□□□□ 0.1
CAPN3-216ENST00000567071 MAST1Q9Y2H9 1570 aa15.68■□□□□ 0.1
CAPN3-216ENST00000567071 PPP1R15AO75807 674 aaPredicted RBP15.68■□□□□ 0.1
CAPN3-216ENST00000567071 ADAMTS2O95450 1211 aa15.68■□□□□ 0.1
CAPN3-216ENST00000567071 YY1P25490 414 aa15.68■□□□□ 0.1
CAPN3-216ENST00000567071 SF3B2Q13435 895 aaKnown RBP15.68■□□□□ 0.1
CAPN3-216ENST00000567071 ASXL1Q8IXJ9 1541 aa15.67■□□□□ 0.1
CAPN3-216ENST00000567071 CEP162Q5TB80 1403 aa15.67■□□□□ 0.1
CAPN3-216ENST00000567071 HDGFP51858 240 aaKnown RBP15.66■□□□□ 0.1
CAPN3-216ENST00000567071 IDI1Q13907 227 aa15.66■□□□□ 0.1
CAPN3-216ENST00000567071 IFFO2Q5TF58 517 aa15.66■□□□□ 0.1
CAPN3-216ENST00000567071 BLMP54132 1417 aaPredicted RBP15.66■□□□□ 0.1
CAPN3-216ENST00000567071 NHSL1Q5SYE7 1610 aa15.65■□□□□ 0.1
CAPN3-216ENST00000567071 PNPLA6Q8IY17 1366 aa15.65■□□□□ 0.1
CAPN3-216ENST00000567071 ADGRB3O60242 1522 aa15.65■□□□□ 0.1
CAPN3-216ENST00000567071 PLEKHG1Q9ULL1 1385 aa15.64■□□□□ 0.09
CAPN3-216ENST00000567071 KANK1Q14678 1352 aa15.63■□□□□ 0.09
CAPN3-216ENST00000567071 DCCP43146 1447 aa15.62■□□□□ 0.09
CAPN3-216ENST00000567071 TBX22Q9Y458 520 aa15.62■□□□□ 0.09
CAPN3-216ENST00000567071 DUOX2Q9NRD8 1548 aa15.62■□□□□ 0.09
CAPN3-216ENST00000567071 ATRNO75882 1429 aa15.61■□□□□ 0.09
CAPN3-216ENST00000567071 DEFB132Q7Z7B7 95 aa15.59■□□□□ 0.09
CAPN3-216ENST00000567071 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.59■□□□□ 0.09
CAPN3-216ENST00000567071 HRCP23327 699 aa15.58■□□□□ 0.08
CAPN3-216ENST00000567071 FNBP4Q8N3X1 1017 aaPredicted RBP15.58■□□□□ 0.08
CAPN3-216ENST00000567071 SLC52A1Q9NWF4 448 aa15.58■□□□□ 0.08
CAPN3-216ENST00000567071 PIK3R4Q99570 1358 aa15.58■□□□□ 0.08
CAPN3-216ENST00000567071 PTCH1Q13635 1447 aa15.58■□□□□ 0.08
CAPN3-216ENST00000567071 PSDA5PKW4 1024 aaPredicted RBP15.57■□□□□ 0.08
CAPN3-216ENST00000567071 RIMS2Q9UQ26 1411 aa15.56■□□□□ 0.08
CAPN3-216ENST00000567071 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.55■□□□□ 0.08
CAPN3-216ENST00000567071 UNC13BO14795 1591 aa15.54■□□□□ 0.08
CAPN3-216ENST00000567071 ZFYVE9O95405 1425 aa15.54■□□□□ 0.08
CAPN3-216ENST00000567071 MST1RQ04912 1400 aa15.54■□□□□ 0.08
CAPN3-216ENST00000567071 ERBINQ96RT1 1412 aa15.53■□□□□ 0.08
CAPN3-216ENST00000567071 DCAF8L1A6NGE4 600 aa15.53■□□□□ 0.08
CAPN3-216ENST00000567071 DDX17Q92841 729 aaKnown RBP15.53■□□□□ 0.08
CAPN3-216ENST00000567071 GJD4Q96KN9 370 aaPredicted RBP15.52■□□□□ 0.08
CAPN3-216ENST00000567071 TRPM2O94759 1503 aa15.52■□□□□ 0.07
CAPN3-216ENST00000567071 BAG6P46379 1132 aa15.51■□□□□ 0.07
CAPN3-216ENST00000567071 AMOTL2Q9Y2J4 779 aa15.51■□□□□ 0.07
CAPN3-216ENST00000567071 MYO5BQ9ULV0 1848 aa15.51■□□□□ 0.07
CAPN3-216ENST00000567071 NOS1P29475 1434 aa15.51■□□□□ 0.07
CAPN3-216ENST00000567071 KIF15Q9NS87 1388 aa15.5■□□□□ 0.07
CAPN3-216ENST00000567071 SPHKAPQ2M3C7 1700 aa15.5■□□□□ 0.07
CAPN3-216ENST00000567071 LMTK2Q8IWU2 1503 aa15.49■□□□□ 0.07
CAPN3-216ENST00000567071 GCC2Q8IWJ2 1684 aa15.48■□□□□ 0.07
CAPN3-216ENST00000567071 BCL9LQ86UU0 1499 aa15.48■□□□□ 0.07
CAPN3-216ENST00000567071 ADAMTS13Q76LX8 1427 aa15.48■□□□□ 0.07
CAPN3-216ENST00000567071 SENP3-EIF4A1A0A087X0R7 540 aa15.47■□□□□ 0.07
CAPN3-216ENST00000567071 RPRD2Q5VT52 1461 aaKnown RBP15.46■□□□□ 0.07
CAPN3-216ENST00000567071 BRWD3Q6RI45 1802 aa15.45■□□□□ 0.06
CAPN3-216ENST00000567071 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.44■□□□□ 0.06
CAPN3-216ENST00000567071 MARF1Q9Y4F3 1742 aaKnown RBP15.44■□□□□ 0.06
CAPN3-216ENST00000567071 CHGAP10645 457 aaKnown RBP15.44■□□□□ 0.06
CAPN3-216ENST00000567071 RRP7BPQ9NSQ0 103 aa15.44■□□□□ 0.06
CAPN3-216ENST00000567071 COL22A1Q8NFW1 1626 aaPredicted RBP15.43■□□□□ 0.06
CAPN3-216ENST00000567071 R3HDM1Q15032 1099 aaKnown RBP15.43■□□□□ 0.06
CAPN3-216ENST00000567071 TMEM131LA2VDJ0 1609 aa15.43■□□□□ 0.06
CAPN3-216ENST00000567071 LAMC1P11047 1609 aa15.43■□□□□ 0.06
CAPN3-216ENST00000567071 MYOM3Q5VTT5 1437 aa15.43■□□□□ 0.06
CAPN3-216ENST00000567071 SOS2Q07890 1332 aaPredicted RBP15.43■□□□□ 0.06
CAPN3-216ENST00000567071 RALGAPBQ86X10 1494 aa15.42■□□□□ 0.06
CAPN3-216ENST00000567071 ADGRL3Q9HAR2 1447 aa15.42■□□□□ 0.06
CAPN3-216ENST00000567071 PTPRUQ92729 1446 aa15.41■□□□□ 0.06
CAPN3-216ENST00000567071 UNC5CLQ8IV45 518 aa15.4■□□□□ 0.06
CAPN3-216ENST00000567071 SEPT12Q8IYM1 358 aa15.4■□□□□ 0.06
CAPN3-216ENST00000567071 GLI3P10071 1580 aa15.4■□□□□ 0.06
CAPN3-216ENST00000567071 XRN1Q8IZH2 1706 aaKnown RBP15.4■□□□□ 0.06
CAPN3-216ENST00000567071 MYOM2P54296 1465 aa15.4■□□□□ 0.06
CAPN3-216ENST00000567071 C1orf167Q5SNV9 1468 aa15.4■□□□□ 0.06
CAPN3-216ENST00000567071 KRT27Q7Z3Y8 459 aa15.39■□□□□ 0.05
CAPN3-216ENST00000567071 PPP1R1BQ9UD71 204 aaPredicted RBP15.36■□□□□ 0.05
CAPN3-216ENST00000567071 NALCNQ8IZF0 1738 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms