RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 NISCHQ9Y2I1 1504 aa9.84□□□□□ -0.83
KARS-208ENST00000566772 KDM4FA0A1W2PPD8 638 aa9.84□□□□□ -0.83
KARS-208ENST00000566772 FOSBP53539 338 aa9.84□□□□□ -0.83
KARS-208ENST00000566772 TUSC1Q2TAM9 212 aa9.84□□□□□ -0.83
KARS-208ENST00000566772 RBM46Q8TBY0 533 aaKnown RBP9.84□□□□□ -0.83
KARS-208ENST00000566772 MFAP1P55081 439 aaKnown RBP9.83□□□□□ -0.84
KARS-208ENST00000566772 RSBN1LQ6PCB5 846 aaPredicted RBP9.83□□□□□ -0.84
KARS-208ENST00000566772 C3orf67Q6ZVT6 689 aa9.83□□□□□ -0.84
KARS-208ENST00000566772 RBM27Q9P2N5 1060 aaKnown RBP9.83□□□□□ -0.84
KARS-208ENST00000566772 POTEFA5A3E0 1075 aa9.82□□□□□ -0.84
KARS-208ENST00000566772 AP1G2O75843 785 aa9.82□□□□□ -0.84
KARS-208ENST00000566772 CD46P15529 392 aa9.82□□□□□ -0.84
KARS-208ENST00000566772 PRSS12P56730 875 aa9.82□□□□□ -0.84
KARS-208ENST00000566772 QPCTQ16769 361 aa9.82□□□□□ -0.84
KARS-208ENST00000566772 PRM3Q9NNZ6 103 aa9.82□□□□□ -0.84
KARS-208ENST00000566772 MOXD2PA6NHM9 499 aa9.81□□□□□ -0.84
KARS-208ENST00000566772 POTEB2H3BUK9 544 aa9.81□□□□□ -0.84
KARS-208ENST00000566772 ZDHHC16Q969W1 377 aa9.81□□□□□ -0.84
KARS-208ENST00000566772 RCCD1A6NED2 376 aa9.8□□□□□ -0.84
KARS-208ENST00000566772 NDUFV2P19404 249 aa9.8□□□□□ -0.84
KARS-208ENST00000566772 RTL5Q5HYW3 569 aaPredicted RBP9.8□□□□□ -0.84
KARS-208ENST00000566772 NUTM1Q86Y26 1132 aa9.8□□□□□ -0.84
KARS-208ENST00000566772 CDCA7LQ96GN5 454 aa9.8□□□□□ -0.84
KARS-208ENST00000566772 PCDHB15Q9Y5E8 787 aa9.8□□□□□ -0.84
KARS-208ENST00000566772 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.79□□□□□ -0.84
KARS-208ENST00000566772 SOCS7O14512 581 aa9.79□□□□□ -0.84
KARS-208ENST00000566772 LILRB3O75022 631 aa9.79□□□□□ -0.84
KARS-208ENST00000566772 LCE2DQ5TA82 110 aaPredicted RBP9.79□□□□□ -0.84
KARS-208ENST00000566772 FOXD4L5Q5VV16 416 aaPredicted RBP9.79□□□□□ -0.84
KARS-208ENST00000566772 ZNF710Q8N1W2 664 aa9.79□□□□□ -0.84
KARS-208ENST00000566772 ZNF454Q8N9F8 522 aa9.79□□□□□ -0.84
KARS-208ENST00000566772 FOXD4L4Q8WXT5 416 aaPredicted RBP9.79□□□□□ -0.84
KARS-208ENST00000566772 ADAM33Q9BZ11 813 aa9.79□□□□□ -0.84
KARS-208ENST00000566772 PDE4CQ08493 712 aa9.78□□□□□ -0.84
KARS-208ENST00000566772 FAM198AQ9UFP1 575 aa9.78□□□□□ -0.84
KARS-208ENST00000566772 HDGFL1Q5TGJ6 251 aa9.77□□□□□ -0.85
KARS-208ENST00000566772 EYA1Q99502 592 aa9.77□□□□□ -0.85
KARS-208ENST00000566772 DDX11L8A8MPP1 907 aa9.76□□□□□ -0.85
KARS-208ENST00000566772 USP17L8P0C7I0 530 aa9.76□□□□□ -0.85
KARS-208ENST00000566772 RFX1P22670 979 aa9.76□□□□□ -0.85
KARS-208ENST00000566772 CABLES1Q8TDN4 633 aa9.76□□□□□ -0.85
KARS-208ENST00000566772 ADAMTS19Q8TE59 1207 aa9.76□□□□□ -0.85
KARS-208ENST00000566772 PBXIP1Q96AQ6 731 aa9.76□□□□□ -0.85
KARS-208ENST00000566772 NUTM2BA6NNL0 878 aaPredicted RBP9.75□□□□□ -0.85
KARS-208ENST00000566772 NUTM2EB1AL46 878 aaPredicted RBP9.75□□□□□ -0.85
KARS-208ENST00000566772 NUTM2DQ5VT03 806 aaPredicted RBP9.75□□□□□ -0.85
KARS-208ENST00000566772 NUTM2AQ8IVF1 878 aaPredicted RBP9.75□□□□□ -0.85
KARS-208ENST00000566772 ZNF428Q96B54 188 aa9.75□□□□□ -0.85
KARS-208ENST00000566772 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.74□□□□□ -0.85
KARS-208ENST00000566772 GJA5P36382 358 aa9.74□□□□□ -0.85
KARS-208ENST00000566772 SULF1Q8IWU6 871 aa9.74□□□□□ -0.85
KARS-208ENST00000566772 CDAN1Q8IWY9 1227 aa9.74□□□□□ -0.85
KARS-208ENST00000566772 GJD4Q96KN9 370 aaPredicted RBP9.74□□□□□ -0.85
KARS-208ENST00000566772 SLC39A7Q92504 469 aa9.73□□□□□ -0.85
KARS-208ENST00000566772 FAM163AQ96GL9 167 aaPredicted RBP9.73□□□□□ -0.85
KARS-208ENST00000566772 C3orf80F5H4A9 247 aa9.72□□□□□ -0.85
KARS-208ENST00000566772 RBM25P49756 843 aaKnown RBP9.72□□□□□ -0.85
KARS-208ENST00000566772 SRPK2P78362 688 aaKnown RBP9.72□□□□□ -0.85
KARS-208ENST00000566772 CFAP70Q5T0N1 1121 aa9.72□□□□□ -0.85
KARS-208ENST00000566772 BRD1O95696 1058 aa9.71□□□□□ -0.86
KARS-208ENST00000566772 NDUFB9Q9Y6M9 179 aa9.71□□□□□ -0.86
KARS-208ENST00000566772 CARNS1A5YM72 827 aa9.7□□□□□ -0.86
KARS-208ENST00000566772 PATL2C9JE40 543 aaKnown RBP9.7□□□□□ -0.86
KARS-208ENST00000566772 C7P10643 843 aa9.7□□□□□ -0.86
KARS-208ENST00000566772 COL9A1P20849 921 aa9.7□□□□□ -0.86
KARS-208ENST00000566772 KCNA1Q09470 495 aa9.7□□□□□ -0.86
KARS-208ENST00000566772 NUDT18Q6ZVK8 323 aa9.7□□□□□ -0.86
KARS-208ENST00000566772 KHSRPQ92945 711 aaKnown RBP eCLIP9.7□□□□□ -0.86
KARS-208ENST00000566772 NUDT7P0C024 238 aa9.69□□□□□ -0.86
KARS-208ENST00000566772 CSB-PGBD3P0DP91 1061 aa9.69□□□□□ -0.86
KARS-208ENST00000566772 PRPF38BQ5VTL8 546 aaKnown RBP9.69□□□□□ -0.86
KARS-208ENST00000566772 TSKSQ9UJT2 592 aa9.69□□□□□ -0.86
KARS-208ENST00000566772 USTQ9Y2C2 406 aa9.69□□□□□ -0.86
KARS-208ENST00000566772 DNAJB2P25686 324 aa9.68□□□□□ -0.86
KARS-208ENST00000566772 WASHC4Q2M389 1173 aa9.68□□□□□ -0.86
KARS-208ENST00000566772 PPP1R12CQ9BZL4 782 aa9.68□□□□□ -0.86
KARS-208ENST00000566772 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.68□□□□□ -0.86
KARS-208ENST00000566772 GPR37L1O60883 481 aa9.67□□□□□ -0.86
KARS-208ENST00000566772 CTDSPL2Q05D32 466 aa9.67□□□□□ -0.86
KARS-208ENST00000566772 MAMSTRQ6ZN01 415 aa9.67□□□□□ -0.86
KARS-208ENST00000566772 TMEM134Q9H6X4 195 aa9.67□□□□□ -0.86
KARS-208ENST00000566772 HMX1Q9NP08 348 aaPredicted RBP9.67□□□□□ -0.86
KARS-208ENST00000566772 METRNQ9UJH8 293 aa9.67□□□□□ -0.86
KARS-208ENST00000566772 KDM4AO75164 1064 aa9.66□□□□□ -0.86
KARS-208ENST00000566772 VAC14Q08AM6 782 aa9.66□□□□□ -0.86
KARS-208ENST00000566772 MMRN1Q13201 1228 aa9.66□□□□□ -0.86
KARS-208ENST00000566772 RDH13Q8NBN7 331 aa9.66□□□□□ -0.86
KARS-208ENST00000566772 TRIM34Q9BYJ4 488 aa9.66□□□□□ -0.86
KARS-208ENST00000566772 ZBTB3Q9H5J0 574 aa9.66□□□□□ -0.86
KARS-208ENST00000566772 ARSIQ5FYB1 569 aa9.65□□□□□ -0.86
KARS-208ENST00000566772 PNMA3Q9UL41 463 aa9.65□□□□□ -0.86
KARS-208ENST00000566772 TATDN2Q93075 761 aa9.64□□□□□ -0.87
KARS-208ENST00000566772 ALG2Q9H553 416 aa9.64□□□□□ -0.87
KARS-208ENST00000566772 PALM3A6NDB9 673 aaPredicted RBP9.63□□□□□ -0.87
KARS-208ENST00000566772 FDX1P10109 184 aa9.63□□□□□ -0.87
KARS-208ENST00000566772 LMOD1P29536 600 aaPredicted RBP9.63□□□□□ -0.87
KARS-208ENST00000566772 PCDHGC3Q9UN70 934 aa9.63□□□□□ -0.87
KARS-208ENST00000566772 HOXA2O43364 376 aa9.62□□□□□ -0.87
KARS-208ENST00000566772 LRRN4Q8WUT4 740 aa9.62□□□□□ -0.87
KARS-208ENST00000566772 TFIP11Q9UBB9 837 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms