RNA–Protein interactions for RNA: ENST00000566582.1

LINC01541-201, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 2

Gene LINC01541, Length 2,414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-201ENST00000566582 CDCA8Q53HL2 280 aa11.85□□□□□ -0.51
LINC01541-201ENST00000566582 CC2D1BQ5T0F9 858 aaKnown RBP11.85□□□□□ -0.51
LINC01541-201ENST00000566582 PER1O15534 1290 aaPredicted RBP11.84□□□□□ -0.51
LINC01541-201ENST00000566582 PNISRQ8TF01 805 aaKnown RBP11.84□□□□□ -0.51
LINC01541-201ENST00000566582 BRD4O60885 1362 aaPredicted RBP11.84□□□□□ -0.51
LINC01541-201ENST00000566582 NEURL4Q96JN8 1562 aa11.84□□□□□ -0.51
LINC01541-201ENST00000566582 IQGAP1P46940 1657 aa11.83□□□□□ -0.51
LINC01541-201ENST00000566582 MYOM2P54296 1465 aa11.83□□□□□ -0.52
LINC01541-201ENST00000566582 DIP2CQ9Y2E4 1556 aa11.83□□□□□ -0.52
LINC01541-201ENST00000566582 ABCC3O15438 1527 aa11.82□□□□□ -0.52
LINC01541-201ENST00000566582 SENP3-EIF4A1A0A087X0R7 540 aa11.82□□□□□ -0.52
LINC01541-201ENST00000566582 NLRP13Q86W25 1043 aa11.82□□□□□ -0.52
LINC01541-201ENST00000566582 YEATS2Q9ULM3 1422 aa11.82□□□□□ -0.52
LINC01541-201ENST00000566582 RICTORQ6R327 1708 aa11.82□□□□□ -0.52
LINC01541-201ENST00000566582 MROH2AA6NES4 1674 aa11.82□□□□□ -0.52
LINC01541-201ENST00000566582 NOS1P29475 1434 aa11.82□□□□□ -0.52
LINC01541-201ENST00000566582 IRX6P78412 446 aaPredicted RBP11.81□□□□□ -0.52
LINC01541-201ENST00000566582 GLI2P10070 1586 aa11.81□□□□□ -0.52
LINC01541-201ENST00000566582 KNSTRNQ9Y448 316 aa11.81□□□□□ -0.52
LINC01541-201ENST00000566582 PARD3Q8TEW0 1356 aa11.81□□□□□ -0.52
LINC01541-201ENST00000566582 KIAA1210Q9ULL0 1709 aa11.81□□□□□ -0.52
LINC01541-201ENST00000566582 CAMSAP1Q5T5Y3 1602 aa11.8□□□□□ -0.52
LINC01541-201ENST00000566582 ADGRB3O60242 1522 aa11.79□□□□□ -0.52
LINC01541-201ENST00000566582 TSPOAP1O95153 1857 aa11.79□□□□□ -0.52
LINC01541-201ENST00000566582 IFT172Q9UG01 1749 aa11.78□□□□□ -0.52
LINC01541-201ENST00000566582 NUTM2DQ5VT03 806 aaPredicted RBP11.78□□□□□ -0.52
LINC01541-201ENST00000566582 DIP2BQ9P265 1576 aa11.78□□□□□ -0.52
LINC01541-201ENST00000566582 RPGRIP1LQ68CZ1 1315 aa11.77□□□□□ -0.52
LINC01541-201ENST00000566582 TRAK1Q9UPV9 953 aa11.77□□□□□ -0.52
LINC01541-201ENST00000566582 LRPPRCP42704 1394 aaKnown RBP11.76□□□□□ -0.53
LINC01541-201ENST00000566582 VGFO15240 615 aaPredicted RBP11.76□□□□□ -0.53
LINC01541-201ENST00000566582 NRXN1Q9ULB1 1477 aa11.75□□□□□ -0.53
LINC01541-201ENST00000566582 TMEM132EQ6IEE7 984 aa11.75□□□□□ -0.53
LINC01541-201ENST00000566582 SALL2Q9Y467 1007 aaPredicted RBP11.75□□□□□ -0.53
LINC01541-201ENST00000566582 CENPJQ9HC77 1338 aaPredicted RBP11.75□□□□□ -0.53
LINC01541-201ENST00000566582 ZC3H13Q5T200 1668 aaKnown RBP11.75□□□□□ -0.53
LINC01541-201ENST00000566582 IDI1Q13907 227 aa11.75□□□□□ -0.53
LINC01541-201ENST00000566582 C14orf93Q9H972 538 aaKnown RBP11.75□□□□□ -0.53
LINC01541-201ENST00000566582 PPLO60437 1756 aa11.75□□□□□ -0.53
LINC01541-201ENST00000566582 SIGLEC1Q9BZZ2 1709 aa11.74□□□□□ -0.53
LINC01541-201ENST00000566582 SYNMO15061 1565 aa11.74□□□□□ -0.53
LINC01541-201ENST00000566582 KDM5AP29375 1690 aaKnown RBP11.74□□□□□ -0.53
LINC01541-201ENST00000566582 PIK3C2GO75747 1445 aa11.74□□□□□ -0.53
LINC01541-201ENST00000566582 ARHGAP31Q2M1Z3 1444 aa11.74□□□□□ -0.53
LINC01541-201ENST00000566582 SENP3Q9H4L4 574 aaPredicted RBP11.74□□□□□ -0.53
LINC01541-201ENST00000566582 NUDCQ9Y266 331 aa11.74□□□□□ -0.53
LINC01541-201ENST00000566582 SLC52A1Q9NWF4 448 aa11.74□□□□□ -0.53
LINC01541-201ENST00000566582 SMG6Q86US8 1419 aaKnown RBP11.73□□□□□ -0.53
LINC01541-201ENST00000566582 ZMYM4Q5VZL5 1548 aa11.72□□□□□ -0.53
LINC01541-201ENST00000566582 STAG3Q9UJ98 1225 aa11.72□□□□□ -0.53
LINC01541-201ENST00000566582 SETBP1Q9Y6X0 1596 aa11.72□□□□□ -0.53
LINC01541-201ENST00000566582 ERVK-7P63135 1459 aa11.72□□□□□ -0.53
LINC01541-201ENST00000566582 AMER1Q5JTC6 1135 aaPredicted RBP11.71□□□□□ -0.53
LINC01541-201ENST00000566582 MLECQ14165 292 aa11.71□□□□□ -0.54
LINC01541-201ENST00000566582 PIK3C2BO00750 1634 aa11.71□□□□□ -0.54
LINC01541-201ENST00000566582 ASXL1Q8IXJ9 1541 aa11.71□□□□□ -0.54
LINC01541-201ENST00000566582 PPP2R1AP30153 589 aa11.7□□□□□ -0.54
LINC01541-201ENST00000566582 ERICH6BQ5W0A0 696 aa11.7□□□□□ -0.54
LINC01541-201ENST00000566582 FBXO31Q5XUX0 539 aaPredicted RBP11.7□□□□□ -0.54
LINC01541-201ENST00000566582 MYOM1P52179 1685 aa11.7□□□□□ -0.54
LINC01541-201ENST00000566582 WDR43Q15061 677 aaKnown RBP eCLIP11.69□□□□□ -0.54
LINC01541-201ENST00000566582 SBNO2Q9Y2G9 1366 aa11.69□□□□□ -0.54
LINC01541-201ENST00000566582 NEXMIFQ5QGS0 1516 aa11.68□□□□□ -0.54
LINC01541-201ENST00000566582 MYO3AQ8NEV4 1616 aa11.68□□□□□ -0.54
LINC01541-201ENST00000566582 PPP4R2Q9NY27 417 aa11.68□□□□□ -0.54
LINC01541-201ENST00000566582 PREX1Q8TCU6 1659 aa11.68□□□□□ -0.54
LINC01541-201ENST00000566582 TSHZ2Q9NRE2 1034 aa11.68□□□□□ -0.54
LINC01541-201ENST00000566582 ADGRB1O14514 1584 aa11.67□□□□□ -0.54
LINC01541-201ENST00000566582 SAFB2Q14151 953 aaKnown RBP eCLIP11.67□□□□□ -0.54
LINC01541-201ENST00000566582 ESF1Q9H501 851 aaKnown RBP11.67□□□□□ -0.54
LINC01541-201ENST00000566582 STK26Q9P289 416 aa11.67□□□□□ -0.54
LINC01541-201ENST00000566582 ADAMTS8Q9UP79 889 aa11.67□□□□□ -0.54
LINC01541-201ENST00000566582 QRICH2Q9H0J4 1663 aa11.67□□□□□ -0.54
LINC01541-201ENST00000566582 PPP6R1Q9UPN7 881 aa11.66□□□□□ -0.54
LINC01541-201ENST00000566582 NPC1L1Q9UHC9 1359 aa11.66□□□□□ -0.54
LINC01541-201ENST00000566582 CARD14Q9BXL6 1004 aa11.66□□□□□ -0.54
LINC01541-201ENST00000566582 EVC2Q86UK5 1308 aa11.65□□□□□ -0.54
LINC01541-201ENST00000566582 PDE3BQ13370 1112 aa11.65□□□□□ -0.54
LINC01541-201ENST00000566582 SLC12A5Q9H2X9 1139 aa11.65□□□□□ -0.54
LINC01541-201ENST00000566582 MYO5BQ9ULV0 1848 aa11.64□□□□□ -0.55
LINC01541-201ENST00000566582 TMEM131LA2VDJ0 1609 aa11.64□□□□□ -0.55
LINC01541-201ENST00000566582 AGLP35573 1532 aa11.64□□□□□ -0.55
LINC01541-201ENST00000566582 BLMP54132 1417 aaPredicted RBP11.63□□□□□ -0.55
LINC01541-201ENST00000566582 REREQ9P2R6 1566 aa11.63□□□□□ -0.55
LINC01541-201ENST00000566582 CLTCQ00610 1675 aaKnown RBP11.63□□□□□ -0.55
LINC01541-201ENST00000566582 ZFYVE9O95405 1425 aa11.63□□□□□ -0.55
LINC01541-201ENST00000566582 INSRP06213 1382 aa11.63□□□□□ -0.55
LINC01541-201ENST00000566582 B4GALNT3Q6L9W6 998 aa11.62□□□□□ -0.55
LINC01541-201ENST00000566582 KIF13AQ9H1H9 1805 aa11.62□□□□□ -0.55
LINC01541-201ENST00000566582 CDCA7LQ96GN5 454 aa11.62□□□□□ -0.55
LINC01541-201ENST00000566582 NSD3Q9BZ95 1437 aa11.62□□□□□ -0.55
LINC01541-201ENST00000566582 POGKQ9P215 609 aa11.62□□□□□ -0.55
LINC01541-201ENST00000566582 TNNT2P45379 298 aaPredicted RBP11.61□□□□□ -0.55
LINC01541-201ENST00000566582 SRPK2P78362 688 aaKnown RBP11.61□□□□□ -0.55
LINC01541-201ENST00000566582 MORC1Q86VD1 984 aa11.61□□□□□ -0.55
LINC01541-201ENST00000566582 CABP2Q9NPB3 220 aa11.61□□□□□ -0.55
LINC01541-201ENST00000566582 RCAN3Q9UKA8 241 aa11.61□□□□□ -0.55
LINC01541-201ENST00000566582 ARHGEF28Q8N1W1 1705 aaKnown RBP11.6□□□□□ -0.55
LINC01541-201ENST00000566582 RNF123Q5XPI4 1314 aa11.6□□□□□ -0.55
LINC01541-201ENST00000566582 PRAM1Q96QH2 718 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms