RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 RPGRIP1LQ68CZ1 1315 aa12.44□□□□□ -0.42
LSM3P5-201ENST00000566307 SYNMO15061 1565 aa12.43□□□□□ -0.42
LSM3P5-201ENST00000566307 SIGLEC1Q9BZZ2 1709 aa12.43□□□□□ -0.42
LSM3P5-201ENST00000566307 ROCK2O75116 1388 aaKnown RBP12.43□□□□□ -0.42
LSM3P5-201ENST00000566307 CCDC7Q96M83 1385 aa12.43□□□□□ -0.42
LSM3P5-201ENST00000566307 PREX1Q8TCU6 1659 aa12.42□□□□□ -0.42
LSM3P5-201ENST00000566307 MIER1Q8N108 512 aa12.42□□□□□ -0.42
LSM3P5-201ENST00000566307 CARD11Q9BXL7 1154 aa12.42□□□□□ -0.42
LSM3P5-201ENST00000566307 RTN4Q9NQC3 1192 aaKnown RBP12.42□□□□□ -0.42
LSM3P5-201ENST00000566307 SLC52A1Q9NWF4 448 aa12.42□□□□□ -0.42
LSM3P5-201ENST00000566307 MROH2AA6NES4 1674 aa12.42□□□□□ -0.42
LSM3P5-201ENST00000566307 WASHC2AQ641Q2 1341 aa12.41□□□□□ -0.42
LSM3P5-201ENST00000566307 MYCNP04198 464 aaPredicted RBP12.41□□□□□ -0.42
LSM3P5-201ENST00000566307 RGL3Q3MIN7 710 aa12.41□□□□□ -0.42
LSM3P5-201ENST00000566307 UGGT1Q9NYU2 1555 aa12.41□□□□□ -0.42
LSM3P5-201ENST00000566307 KDM2AQ9Y2K7 1162 aa12.41□□□□□ -0.42
LSM3P5-201ENST00000566307 SPATA31D1Q6ZQQ2 1576 aa12.4□□□□□ -0.42
LSM3P5-201ENST00000566307 ATXN8OSP0DMR3 200 aa12.4□□□□□ -0.42
LSM3P5-201ENST00000566307 DNAJC5Q9H3Z4 198 aa12.4□□□□□ -0.42
LSM3P5-201ENST00000566307 PPLO60437 1756 aa12.4□□□□□ -0.42
LSM3P5-201ENST00000566307 ERVK-7P63135 1459 aa12.4□□□□□ -0.43
LSM3P5-201ENST00000566307 ZFYVE9O95405 1425 aa12.39□□□□□ -0.43
LSM3P5-201ENST00000566307 CAPN15O75808 1086 aa12.39□□□□□ -0.43
LSM3P5-201ENST00000566307 DDX10Q13206 875 aaKnown RBP12.39□□□□□ -0.43
LSM3P5-201ENST00000566307 ZNF326Q5BKZ1 582 aaKnown RBP12.39□□□□□ -0.43
LSM3P5-201ENST00000566307 AMER1Q5JTC6 1135 aaPredicted RBP12.39□□□□□ -0.43
LSM3P5-201ENST00000566307 IQGAP1P46940 1657 aa12.38□□□□□ -0.43
LSM3P5-201ENST00000566307 DSG3P32926 999 aa12.38□□□□□ -0.43
LSM3P5-201ENST00000566307 HIRIP3Q9BW71 556 aaPredicted RBP12.38□□□□□ -0.43
LSM3P5-201ENST00000566307 SETBP1Q9Y6X0 1596 aa12.38□□□□□ -0.43
LSM3P5-201ENST00000566307 KIF7Q2M1P5 1343 aa12.37□□□□□ -0.43
LSM3P5-201ENST00000566307 SCAF11Q99590 1463 aaKnown RBP12.36□□□□□ -0.43
LSM3P5-201ENST00000566307 CLTCQ00610 1675 aaKnown RBP12.35□□□□□ -0.43
LSM3P5-201ENST00000566307 CCER2I3L3R5 266 aa12.35□□□□□ -0.43
LSM3P5-201ENST00000566307 TMEM131LA2VDJ0 1609 aa12.35□□□□□ -0.43
LSM3P5-201ENST00000566307 NEXMIFQ5QGS0 1516 aa12.35□□□□□ -0.43
LSM3P5-201ENST00000566307 PIK3C2GO75747 1445 aa12.35□□□□□ -0.43
LSM3P5-201ENST00000566307 C11orf95C9JLR9 678 aaPredicted RBP12.34□□□□□ -0.43
LSM3P5-201ENST00000566307 SLC24A1O60721 1099 aa12.34□□□□□ -0.43
LSM3P5-201ENST00000566307 NBPF1Q3BBV0 1214 aa12.34□□□□□ -0.43
LSM3P5-201ENST00000566307 CFAP65Q6ZU64 1925 aaKnown RBP12.33□□□□□ -0.44
LSM3P5-201ENST00000566307 KDM5AP29375 1690 aaKnown RBP12.33□□□□□ -0.44
LSM3P5-201ENST00000566307 EIF3AQ14152 1382 aaKnown RBP12.32□□□□□ -0.44
LSM3P5-201ENST00000566307 ST20-MTHFSA0A0A6YYL1 179 aa12.32□□□□□ -0.44
LSM3P5-201ENST00000566307 ANP32CO43423 234 aa12.32□□□□□ -0.44
LSM3P5-201ENST00000566307 FKBP8Q14318 412 aa12.32□□□□□ -0.44
LSM3P5-201ENST00000566307 MYO3AQ8NEV4 1616 aa12.32□□□□□ -0.44
LSM3P5-201ENST00000566307 VGFO15240 615 aaPredicted RBP12.31□□□□□ -0.44
LSM3P5-201ENST00000566307 IDI1Q13907 227 aa12.31□□□□□ -0.44
LSM3P5-201ENST00000566307 TESK2Q96S53 571 aa12.31□□□□□ -0.44
LSM3P5-201ENST00000566307 ADGRF5Q8IZF2 1346 aa12.31□□□□□ -0.44
LSM3P5-201ENST00000566307 SBNO2Q9Y2G9 1366 aa12.3□□□□□ -0.44
LSM3P5-201ENST00000566307 C14orf93Q9H972 538 aaKnown RBP12.3□□□□□ -0.44
LSM3P5-201ENST00000566307 ADGRB1O14514 1584 aa12.3□□□□□ -0.44
LSM3P5-201ENST00000566307 ZMYM3Q14202 1370 aa12.3□□□□□ -0.44
LSM3P5-201ENST00000566307 A2ML1A8K2U0 1454 aa12.27□□□□□ -0.44
LSM3P5-201ENST00000566307 KTN1Q86UP2 1357 aaKnown RBP12.27□□□□□ -0.45
LSM3P5-201ENST00000566307 MYO5BQ9ULV0 1848 aa12.26□□□□□ -0.45
LSM3P5-201ENST00000566307 TRHP20396 242 aaPredicted RBP12.26□□□□□ -0.45
LSM3P5-201ENST00000566307 TMF1P82094 1093 aa12.26□□□□□ -0.45
LSM3P5-201ENST00000566307 CDCA8Q53HL2 280 aa12.26□□□□□ -0.45
LSM3P5-201ENST00000566307 ESF1Q9H501 851 aaKnown RBP12.26□□□□□ -0.45
LSM3P5-201ENST00000566307 CENPBP07199 599 aaPredicted RBP12.25□□□□□ -0.45
LSM3P5-201ENST00000566307 CFAP70Q5T0N1 1121 aa12.25□□□□□ -0.45
LSM3P5-201ENST00000566307 FBXO31Q5XUX0 539 aaPredicted RBP12.25□□□□□ -0.45
LSM3P5-201ENST00000566307 NLRP1Q9C000 1473 aa12.25□□□□□ -0.45
LSM3P5-201ENST00000566307 CHGAP10645 457 aaKnown RBP12.24□□□□□ -0.45
LSM3P5-201ENST00000566307 TNRQ92752 1358 aa12.24□□□□□ -0.45
LSM3P5-201ENST00000566307 DISP3Q9P2K9 1392 aa12.22□□□□□ -0.45
LSM3P5-201ENST00000566307 PUS7Q96PZ0 661 aaKnown RBP12.22□□□□□ -0.45
LSM3P5-201ENST00000566307 PRKRIP1Q9H875 184 aaPredicted RBP12.22□□□□□ -0.45
LSM3P5-201ENST00000566307 FER1L4A9Z1Z3 1794 aa12.21□□□□□ -0.45
LSM3P5-201ENST00000566307 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.21□□□□□ -0.45
LSM3P5-201ENST00000566307 MLECQ14165 292 aa12.2□□□□□ -0.46
LSM3P5-201ENST00000566307 UBR1Q8IWV7 1749 aa12.2□□□□□ -0.46
LSM3P5-201ENST00000566307 RIMS2Q9UQ26 1411 aa12.2□□□□□ -0.46
LSM3P5-201ENST00000566307 C3P01024 1663 aa12.19□□□□□ -0.46
LSM3P5-201ENST00000566307 HDGFP51858 240 aaKnown RBP12.19□□□□□ -0.46
LSM3P5-201ENST00000566307 ASXL1Q8IXJ9 1541 aa12.19□□□□□ -0.46
LSM3P5-201ENST00000566307 DLC1Q96QB1 1528 aa12.19□□□□□ -0.46
LSM3P5-201ENST00000566307 ARHGEF28Q8N1W1 1705 aaKnown RBP12.19□□□□□ -0.46
LSM3P5-201ENST00000566307 ALKQ9UM73 1620 aa12.19□□□□□ -0.46
LSM3P5-201ENST00000566307 CENPJQ9HC77 1338 aaPredicted RBP12.18□□□□□ -0.46
LSM3P5-201ENST00000566307 SETD1AO15047 1707 aaKnown RBP12.18□□□□□ -0.46
LSM3P5-201ENST00000566307 STAG3Q9UJ98 1225 aa12.17□□□□□ -0.46
LSM3P5-201ENST00000566307 NPC1L1Q9UHC9 1359 aa12.17□□□□□ -0.46
LSM3P5-201ENST00000566307 MYOM1P52179 1685 aa12.16□□□□□ -0.46
LSM3P5-201ENST00000566307 QRICH2Q9H0J4 1663 aa12.16□□□□□ -0.46
LSM3P5-201ENST00000566307 PER1O15534 1290 aaPredicted RBP12.16□□□□□ -0.46
LSM3P5-201ENST00000566307 RALBP1Q15311 655 aa12.16□□□□□ -0.46
LSM3P5-201ENST00000566307 TMEM2Q9UHN6 1383 aa12.16□□□□□ -0.46
LSM3P5-201ENST00000566307 SLIT1O75093 1534 aa12.16□□□□□ -0.46
LSM3P5-201ENST00000566307 ADAMTSL3P82987 1691 aa12.16□□□□□ -0.46
LSM3P5-201ENST00000566307 NRXN3Q9Y4C0 1643 aa12.15□□□□□ -0.46
LSM3P5-201ENST00000566307 ARHGAP23Q9P227 1491 aa12.15□□□□□ -0.46
LSM3P5-201ENST00000566307 YTHDC2Q9H6S0 1430 aaKnown RBP12.15□□□□□ -0.46
LSM3P5-201ENST00000566307 PARD3Q8TEW0 1356 aa12.14□□□□□ -0.47
LSM3P5-201ENST00000566307 PTPRMP28827 1452 aa12.14□□□□□ -0.47
LSM3P5-201ENST00000566307 ABCB7O75027 752 aa12.13□□□□□ -0.47
LSM3P5-201ENST00000566307 SIRT1Q96EB6 747 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms