RNA–Protein interactions for RNA: ENST00000566062.1

SUB1P4-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 4, humanhuman

BASIC

Gene SUB1P4, Length 339 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P4-201ENST00000566062 MCM6Q14566 821 aa3.28□□□□□ -1.88
SUB1P4-201ENST00000566062 CSPP1Q1MSJ5 1256 aa3.28□□□□□ -1.88
SUB1P4-201ENST00000566062 C6orf132Q5T0Z8 1188 aa3.28□□□□□ -1.88
SUB1P4-201ENST00000566062 ZNF454Q8N9F8 522 aa3.28□□□□□ -1.88
SUB1P4-201ENST00000566062 FBXW7Q969H0 707 aa3.28□□□□□ -1.88
SUB1P4-201ENST00000566062 CCDC97Q96F63 343 aaPredicted RBP3.28□□□□□ -1.88
SUB1P4-201ENST00000566062 JPH4Q96JJ6 628 aa3.28□□□□□ -1.88
SUB1P4-201ENST00000566062 FAM217BQ9NTX9 383 aaPredicted RBP3.28□□□□□ -1.88
SUB1P4-201ENST00000566062 ZBTB7CA1YPR0 619 aa3.27□□□□□ -1.89
SUB1P4-201ENST00000566062 ONECUT3O60422 494 aaPredicted RBP3.27□□□□□ -1.89
SUB1P4-201ENST00000566062 NUDT7P0C024 238 aa3.27□□□□□ -1.89
SUB1P4-201ENST00000566062 PPP4R3BQ5MIZ7 849 aa3.27□□□□□ -1.89
SUB1P4-201ENST00000566062 METTL3Q86U44 580 aaKnown RBP3.27□□□□□ -1.89
SUB1P4-201ENST00000566062 PROSER2Q86WR7 435 aaPredicted RBP3.27□□□□□ -1.89
SUB1P4-201ENST00000566062 KHSRPQ92945 711 aaKnown RBP eCLIP3.27□□□□□ -1.89
SUB1P4-201ENST00000566062 HS3ST6Q96QI5 342 aa3.27□□□□□ -1.89
SUB1P4-201ENST00000566062 TMUB1Q9BVT8 246 aa3.27□□□□□ -1.89
SUB1P4-201ENST00000566062 TBC1D2Q9BYX2 928 aa3.27□□□□□ -1.89
SUB1P4-201ENST00000566062 SNRKQ9NRH2 765 aa3.27□□□□□ -1.89
SUB1P4-201ENST00000566062 FAM205CA6NFA0 338 aa3.26□□□□□ -1.89
SUB1P4-201ENST00000566062 CLK2P49760 499 aaKnown RBP3.26□□□□□ -1.89
SUB1P4-201ENST00000566062 FOSBP53539 338 aa3.26□□□□□ -1.89
SUB1P4-201ENST00000566062 VARS2Q5ST30 1063 aaKnown RBP3.26□□□□□ -1.89
SUB1P4-201ENST00000566062 MYSM1Q5VVJ2 828 aa3.26□□□□□ -1.89
SUB1P4-201ENST00000566062 NUTM1Q86Y26 1132 aa3.26□□□□□ -1.89
SUB1P4-201ENST00000566062 RBM46Q8TBY0 533 aaKnown RBP3.26□□□□□ -1.89
SUB1P4-201ENST00000566062 PXYLP1Q8TE99 480 aa3.26□□□□□ -1.89
SUB1P4-201ENST00000566062 ZDHHC16Q969W1 377 aa3.26□□□□□ -1.89
SUB1P4-201ENST00000566062 SLC4A5Q9BY07 1137 aa3.26□□□□□ -1.89
SUB1P4-201ENST00000566062 BCL2L12Q9HB09 334 aa3.26□□□□□ -1.89
SUB1P4-201ENST00000566062 LHX6Q9UPM6 363 aa3.26□□□□□ -1.89
SUB1P4-201ENST00000566062 ZNF330Q9Y3S2 320 aaPredicted RBP3.26□□□□□ -1.89
SUB1P4-201ENST00000566062 ADGRG1Q9Y653 693 aa3.26□□□□□ -1.89
SUB1P4-201ENST00000566062 DDX11L8A8MPP1 907 aa3.25□□□□□ -1.89
SUB1P4-201ENST00000566062 TK2O00142 265 aa3.25□□□□□ -1.89
SUB1P4-201ENST00000566062 ARHGAP33O14559 1287 aa3.25□□□□□ -1.89
SUB1P4-201ENST00000566062 RFC5P40937 340 aa3.25□□□□□ -1.89
SUB1P4-201ENST00000566062 RIC3Q7Z5B4 369 aa3.25□□□□□ -1.89
SUB1P4-201ENST00000566062 CERKQ8TCT0 537 aa3.25□□□□□ -1.89
SUB1P4-201ENST00000566062 ZNF775Q96BV0 537 aaPredicted RBP3.25□□□□□ -1.89
SUB1P4-201ENST00000566062 KCNH8Q96L42 1107 aa3.25□□□□□ -1.89
SUB1P4-201ENST00000566062 ADAM33Q9BZ11 813 aa3.25□□□□□ -1.89
SUB1P4-201ENST00000566062 COG6Q9Y2V7 657 aa3.25□□□□□ -1.89
SUB1P4-201ENST00000566062 RCCD1A6NED2 376 aa3.24□□□□□ -1.89
SUB1P4-201ENST00000566062 NUTM2BA6NNL0 878 aaPredicted RBP3.24□□□□□ -1.89
SUB1P4-201ENST00000566062 NUTM2EB1AL46 878 aaPredicted RBP3.24□□□□□ -1.89
SUB1P4-201ENST00000566062 AP1G2O75843 785 aa3.24□□□□□ -1.89
SUB1P4-201ENST00000566062 NDUFV2P19404 249 aa3.24□□□□□ -1.89
SUB1P4-201ENST00000566062 ABL2P42684 1182 aa3.24□□□□□ -1.89
SUB1P4-201ENST00000566062 PRSS12P56730 875 aa3.24□□□□□ -1.89
SUB1P4-201ENST00000566062 TMEM259Q4ZIN3 620 aa3.24□□□□□ -1.89
SUB1P4-201ENST00000566062 NUTM2DQ5VT03 806 aaPredicted RBP3.24□□□□□ -1.89
SUB1P4-201ENST00000566062 NPM2Q86SE8 214 aaKnown RBP3.24□□□□□ -1.89
SUB1P4-201ENST00000566062 AEBP1Q8IUX7 1158 aa3.24□□□□□ -1.89
SUB1P4-201ENST00000566062 NUTM2AQ8IVF1 878 aaPredicted RBP3.24□□□□□ -1.89
SUB1P4-201ENST00000566062 SPIRE2Q8WWL2 714 aa3.24□□□□□ -1.89
SUB1P4-201ENST00000566062 CDCA7LQ96GN5 454 aa3.24□□□□□ -1.89
SUB1P4-201ENST00000566062 GDPD2Q9HCC8 539 aa3.24□□□□□ -1.89
SUB1P4-201ENST00000566062 LIMD1Q9UGP4 676 aa3.24□□□□□ -1.89
SUB1P4-201ENST00000566062 SERPINA10Q9UK55 444 aa3.24□□□□□ -1.89
SUB1P4-201ENST00000566062 SPDYE5A6NIY4 337 aa3.23□□□□□ -1.89
SUB1P4-201ENST00000566062 DIXDC1Q155Q3 683 aa3.23□□□□□ -1.89
SUB1P4-201ENST00000566062 FBXO31Q5XUX0 539 aaPredicted RBP3.23□□□□□ -1.89
SUB1P4-201ENST00000566062 NUDT18Q6ZVK8 323 aa3.23□□□□□ -1.89
SUB1P4-201ENST00000566062 WWC1Q8IX03 1113 aa3.23□□□□□ -1.89
SUB1P4-201ENST00000566062 RDH13Q8NBN7 331 aa3.23□□□□□ -1.89
SUB1P4-201ENST00000566062 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.23□□□□□ -1.89
SUB1P4-201ENST00000566062 PNMA3Q9UL41 463 aa3.23□□□□□ -1.89
SUB1P4-201ENST00000566062 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.22□□□□□ -1.89
SUB1P4-201ENST00000566062 POTEB3A0JP26 581 aa3.22□□□□□ -1.89
SUB1P4-201ENST00000566062 MOXD2PA6NHM9 499 aa3.22□□□□□ -1.89
SUB1P4-201ENST00000566062 PPP1R3GB7ZBB8 358 aa3.22□□□□□ -1.89
SUB1P4-201ENST00000566062 SMAPO00193 183 aa3.22□□□□□ -1.89
SUB1P4-201ENST00000566062 COL9A1P20849 921 aa3.22□□□□□ -1.89
SUB1P4-201ENST00000566062 PTPREP23469 700 aa3.22□□□□□ -1.89
SUB1P4-201ENST00000566062 LSM11P83369 360 aaKnown RBP eCLIP3.22□□□□□ -1.89
SUB1P4-201ENST00000566062 RTL5Q5HYW3 569 aaPredicted RBP3.22□□□□□ -1.89
SUB1P4-201ENST00000566062 POTEBQ6S5H4 581 aa3.22□□□□□ -1.89
SUB1P4-201ENST00000566062 BANK1Q8NDB2 785 aa3.22□□□□□ -1.89
SUB1P4-201ENST00000566062 TSC1Q92574 1164 aa3.22□□□□□ -1.89
SUB1P4-201ENST00000566062 NECTIN2Q92692 538 aa3.22□□□□□ -1.89
SUB1P4-201ENST00000566062 CALR3Q96L12 384 aaKnown RBP3.22□□□□□ -1.89
SUB1P4-201ENST00000566062 PRM3Q9NNZ6 103 aa3.22□□□□□ -1.89
SUB1P4-201ENST00000566062 RBM27Q9P2N5 1060 aaKnown RBP3.22□□□□□ -1.89
SUB1P4-201ENST00000566062 FAM198AQ9UFP1 575 aa3.22□□□□□ -1.89
SUB1P4-201ENST00000566062 PCDHB15Q9Y5E8 787 aa3.22□□□□□ -1.89
SUB1P4-201ENST00000566062 ACIN1Q9UKV3 1341 aaKnown RBP3.21□□□□□ -1.89
SUB1P4-201ENST00000566062 RFX1P22670 979 aa3.21□□□□□ -1.9
SUB1P4-201ENST00000566062 SULF1Q8IWU6 871 aa3.21□□□□□ -1.9
SUB1P4-201ENST00000566062 FNBP4Q8N3X1 1017 aaPredicted RBP3.21□□□□□ -1.9
SUB1P4-201ENST00000566062 TTC13Q8NBP0 860 aa3.21□□□□□ -1.9
SUB1P4-201ENST00000566062 CABLES1Q8TDN4 633 aa3.21□□□□□ -1.9
SUB1P4-201ENST00000566062 CCDC9Q9Y3X0 531 aaKnown RBP3.21□□□□□ -1.9
SUB1P4-201ENST00000566062 C3orf80F5H4A9 247 aa3.2□□□□□ -1.9
SUB1P4-201ENST00000566062 SPTLC1O15269 473 aa3.2□□□□□ -1.9
SUB1P4-201ENST00000566062 CD46P15529 392 aa3.2□□□□□ -1.9
SUB1P4-201ENST00000566062 DNAJB2P25686 324 aa3.2□□□□□ -1.9
SUB1P4-201ENST00000566062 QPCTQ16769 361 aa3.2□□□□□ -1.9
SUB1P4-201ENST00000566062 RSBN1LQ6PCB5 846 aaPredicted RBP3.2□□□□□ -1.9
SUB1P4-201ENST00000566062 PACS2Q86VP3 889 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms