RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 C14orf37Q86TY3 774 aa15.14■□□□□ 0.01
SMPD3-206ENST00000566009 ZNF644Q9H582 1327 aaPredicted RBP15.14■□□□□ 0.01
SMPD3-206ENST00000566009 ATF3P18847 181 aa15.13■□□□□ 0.01
SMPD3-206ENST00000566009 ARHGAP35Q9NRY4 1499 aa15.13■□□□□ 0.01
SMPD3-206ENST00000566009 MBD5Q9P267 1494 aa15.13■□□□□ 0.01
SMPD3-206ENST00000566009 C19orf44Q9H6X5 657 aa15.12■□□□□ 0.01
SMPD3-206ENST00000566009 BCL9LQ86UU0 1499 aa15.12■□□□□ 0.01
SMPD3-206ENST00000566009 CFAP65Q6ZU64 1925 aaKnown RBP15.11■□□□□ 0.01
SMPD3-206ENST00000566009 NCOA3Q9Y6Q9 1424 aa15.11■□□□□ 0.01
SMPD3-206ENST00000566009 SF3B2Q13435 895 aaKnown RBP15.11■□□□□ 0.01
SMPD3-206ENST00000566009 STAG3Q9UJ98 1225 aa15.11■□□□□ 0.01
SMPD3-206ENST00000566009 MAST1Q9Y2H9 1570 aa15.11■□□□□ 0.01
SMPD3-206ENST00000566009 FNBP4Q8N3X1 1017 aaPredicted RBP15.1■□□□□ 0.01
SMPD3-206ENST00000566009 BCANQ96GW7 911 aa15.1■□□□□ 0.01
SMPD3-206ENST00000566009 PNPLA6Q8IY17 1366 aa15.1■□□□□ 0.01
SMPD3-206ENST00000566009 ATRNO75882 1429 aa15.09■□□□□ 0.01
SMPD3-206ENST00000566009 CCDC18Q5T9S5 1454 aa15.09■□□□□ 0.01
SMPD3-206ENST00000566009 CCNB3Q8WWL7 1395 aa15.08■□□□□ 0
SMPD3-206ENST00000566009 CAMSAP2Q08AD1 1489 aa15.07■□□□□ 0
SMPD3-206ENST00000566009 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.06■□□□□ 0
SMPD3-206ENST00000566009 C1QTNF8P60827 252 aa15.05■□□□□ -0
SMPD3-206ENST00000566009 PIK3C2BO00750 1634 aa15.04■□□□□ -0
SMPD3-206ENST00000566009 MROH1Q8NDA8 1641 aa15.04■□□□□ -0
SMPD3-206ENST00000566009 CHD2O14647 1828 aaKnown RBP15.03■□□□□ -0
SMPD3-206ENST00000566009 ZNF784Q8NCA9 323 aaPredicted RBP15.03■□□□□ -0
SMPD3-206ENST00000566009 DDX17Q92841 729 aaKnown RBP15.03■□□□□ -0
SMPD3-206ENST00000566009 ASXL1Q8IXJ9 1541 aa15.02■□□□□ -0
SMPD3-206ENST00000566009 GJD4Q96KN9 370 aaPredicted RBP15.02■□□□□ -0
SMPD3-206ENST00000566009 EFCAB6Q5THR3 1501 aa15.02□□□□□ -0.01
SMPD3-206ENST00000566009 CASKIN1Q8WXD9 1431 aa15.01□□□□□ -0.01
SMPD3-206ENST00000566009 R3HDM1Q15032 1099 aaKnown RBP15.01□□□□□ -0.01
SMPD3-206ENST00000566009 DCAF8L1A6NGE4 600 aa15□□□□□ -0.01
SMPD3-206ENST00000566009 IDI1Q13907 227 aa15□□□□□ -0.01
SMPD3-206ENST00000566009 UBTFP17480 764 aaKnown RBP14.98□□□□□ -0.01
SMPD3-206ENST00000566009 BAG6P46379 1132 aa14.97□□□□□ -0.01
SMPD3-206ENST00000566009 RSPH4AQ5TD94 716 aa14.97□□□□□ -0.01
SMPD3-206ENST00000566009 EHMT2Q96KQ7 1210 aa14.97□□□□□ -0.01
SMPD3-206ENST00000566009 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.97□□□□□ -0.01
SMPD3-206ENST00000566009 PTCH1Q13635 1447 aa14.97□□□□□ -0.01
SMPD3-206ENST00000566009 EEA1Q15075 1411 aa14.97□□□□□ -0.01
SMPD3-206ENST00000566009 CCDC141Q6ZP82 1450 aa14.96□□□□□ -0.01
SMPD3-206ENST00000566009 CEP152O94986 1710 aa14.96□□□□□ -0.01
SMPD3-206ENST00000566009 ARHGAP31Q2M1Z3 1444 aa14.96□□□□□ -0.01
SMPD3-206ENST00000566009 TBX22Q9Y458 520 aa14.96□□□□□ -0.01
SMPD3-206ENST00000566009 UNC13BO14795 1591 aa14.95□□□□□ -0.02
SMPD3-206ENST00000566009 PPP1R15AO75807 674 aaPredicted RBP14.95□□□□□ -0.02
SMPD3-206ENST00000566009 MST1RQ04912 1400 aa14.92□□□□□ -0.02
SMPD3-206ENST00000566009 TSPY4P0CV99 314 aa14.92□□□□□ -0.02
SMPD3-206ENST00000566009 TSPY10P0CW01 314 aa14.92□□□□□ -0.02
SMPD3-206ENST00000566009 PLEKHG1Q9ULL1 1385 aa14.92□□□□□ -0.02
SMPD3-206ENST00000566009 EN1Q05925 392 aaPredicted RBP14.91□□□□□ -0.02
SMPD3-206ENST00000566009 DCCP43146 1447 aa14.91□□□□□ -0.02
SMPD3-206ENST00000566009 SEPT12Q8IYM1 358 aa14.9□□□□□ -0.02
SMPD3-206ENST00000566009 BRWD3Q6RI45 1802 aa14.89□□□□□ -0.03
SMPD3-206ENST00000566009 RALGAPBQ86X10 1494 aa14.88□□□□□ -0.03
SMPD3-206ENST00000566009 MTUS2Q5JR59 1369 aa14.87□□□□□ -0.03
SMPD3-206ENST00000566009 SPHKAPQ2M3C7 1700 aa14.87□□□□□ -0.03
SMPD3-206ENST00000566009 GLI3P10071 1580 aa14.87□□□□□ -0.03
SMPD3-206ENST00000566009 EIF2AK4Q9P2K8 1649 aaKnown RBP14.86□□□□□ -0.03
SMPD3-206ENST00000566009 KRT27Q7Z3Y8 459 aa14.86□□□□□ -0.03
SMPD3-206ENST00000566009 AMOTL2Q9Y2J4 779 aa14.86□□□□□ -0.03
SMPD3-206ENST00000566009 SOS2Q07890 1332 aaPredicted RBP14.86□□□□□ -0.03
SMPD3-206ENST00000566009 HDGFP51858 240 aaKnown RBP14.85□□□□□ -0.03
SMPD3-206ENST00000566009 PPP1R1BQ9UD71 204 aaPredicted RBP14.85□□□□□ -0.03
SMPD3-206ENST00000566009 PIK3R4Q99570 1358 aa14.85□□□□□ -0.03
SMPD3-206ENST00000566009 ZFYVE9O95405 1425 aa14.84□□□□□ -0.03
SMPD3-206ENST00000566009 FYCO1Q9BQS8 1478 aa14.84□□□□□ -0.03
SMPD3-206ENST00000566009 ADGRB3O60242 1522 aa14.84□□□□□ -0.03
SMPD3-206ENST00000566009 UNC5CLQ8IV45 518 aa14.84□□□□□ -0.03
SMPD3-206ENST00000566009 NINLQ9Y2I6 1382 aa14.83□□□□□ -0.04
SMPD3-206ENST00000566009 ADAMTS13Q76LX8 1427 aa14.83□□□□□ -0.04
SMPD3-206ENST00000566009 SLC52A1Q9NWF4 448 aa14.81□□□□□ -0.04
SMPD3-206ENST00000566009 RIMS2Q9UQ26 1411 aa14.81□□□□□ -0.04
SMPD3-206ENST00000566009 ONECUT3O60422 494 aaPredicted RBP14.8□□□□□ -0.04
SMPD3-206ENST00000566009 EZH2Q15910 746 aaKnown RBP14.8□□□□□ -0.04
SMPD3-206ENST00000566009 PTPRUQ92729 1446 aa14.8□□□□□ -0.04
SMPD3-206ENST00000566009 MYOM2P54296 1465 aa14.8□□□□□ -0.04
SMPD3-206ENST00000566009 CAMTA1Q9Y6Y1 1673 aa14.79□□□□□ -0.04
SMPD3-206ENST00000566009 SPON1Q9HCB6 807 aa14.78□□□□□ -0.04
SMPD3-206ENST00000566009 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.78□□□□□ -0.04
SMPD3-206ENST00000566009 COL22A1Q8NFW1 1626 aaPredicted RBP14.77□□□□□ -0.04
SMPD3-206ENST00000566009 ARHGEF5Q12774 1597 aa14.77□□□□□ -0.04
SMPD3-206ENST00000566009 TRPM2O94759 1503 aa14.76□□□□□ -0.05
SMPD3-206ENST00000566009 EHBP1L1Q8N3D4 1523 aa14.76□□□□□ -0.05
SMPD3-206ENST00000566009 NOS1P29475 1434 aa14.76□□□□□ -0.05
SMPD3-206ENST00000566009 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.76□□□□□ -0.05
SMPD3-206ENST00000566009 ORAI2Q96SN7 254 aa14.76□□□□□ -0.05
SMPD3-206ENST00000566009 LAMC1P11047 1609 aa14.76□□□□□ -0.05
SMPD3-206ENST00000566009 SLIT2O94813 1529 aa14.76□□□□□ -0.05
SMPD3-206ENST00000566009 CEP350Q5VT06 3117 aa14.75□□□□□ -0.05
SMPD3-206ENST00000566009 GIGYF1O75420 1035 aaPredicted RBP14.75□□□□□ -0.05
SMPD3-206ENST00000566009 C1orf167Q5SNV9 1468 aa14.75□□□□□ -0.05
SMPD3-206ENST00000566009 MARF1Q9Y4F3 1742 aaKnown RBP14.75□□□□□ -0.05
SMPD3-206ENST00000566009 KCNQ2O43526 872 aa14.74□□□□□ -0.05
SMPD3-206ENST00000566009 DISP2A7MBM2 1401 aa14.74□□□□□ -0.05
SMPD3-206ENST00000566009 VPS72Q15906 364 aa14.73□□□□□ -0.05
SMPD3-206ENST00000566009 CAMKK2Q96RR4 588 aa14.73□□□□□ -0.05
SMPD3-206ENST00000566009 CEP162Q5TB80 1403 aa14.73□□□□□ -0.05
SMPD3-206ENST00000566009 ADGRL3Q9HAR2 1447 aa14.72□□□□□ -0.05
SMPD3-206ENST00000566009 DUOX2Q9NRD8 1548 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms