RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 TPM1P09493 284 aa16.71■□□□□ 0.26
CX3CL1-204ENST00000565912 MYBBP1AQ9BQG0 1328 aaKnown RBP16.7■□□□□ 0.26
CX3CL1-204ENST00000565912 APPP05067 770 aa16.7■□□□□ 0.26
CX3CL1-204ENST00000565912 NECTIN2Q92692 538 aa16.7■□□□□ 0.26
CX3CL1-204ENST00000565912 SYTL4Q96C24 671 aaPredicted RBP16.7■□□□□ 0.26
CX3CL1-204ENST00000565912 CPLX2Q6PUV4 134 aaKnown RBP16.7■□□□□ 0.26
CX3CL1-204ENST00000565912 DHX16O60231 1041 aaKnown RBP16.7■□□□□ 0.26
CX3CL1-204ENST00000565912 LRRFIP1Q32MZ4 808 aaKnown RBP16.7■□□□□ 0.26
CX3CL1-204ENST00000565912 FBXW7Q969H0 707 aa16.69■□□□□ 0.26
CX3CL1-204ENST00000565912 TRIM29Q14134 588 aa16.69■□□□□ 0.26
CX3CL1-204ENST00000565912 CGNL1Q0VF96 1302 aa16.69■□□□□ 0.26
CX3CL1-204ENST00000565912 CYB5RLQ6IPT4 315 aa16.69■□□□□ 0.26
CX3CL1-204ENST00000565912 PCMTD1Q96MG8 357 aaPredicted RBP16.69■□□□□ 0.26
CX3CL1-204ENST00000565912 MINK1Q8N4C8 1332 aaPredicted RBP16.69■□□□□ 0.26
CX3CL1-204ENST00000565912 SLC4A3P48751 1232 aa16.68■□□□□ 0.26
CX3CL1-204ENST00000565912 IGF1RP08069 1367 aa16.68■□□□□ 0.26
CX3CL1-204ENST00000565912 CENPQQ7L2Z9 268 aaPredicted RBP16.68■□□□□ 0.26
CX3CL1-204ENST00000565912 VPS37DQ86XT2 251 aa16.68■□□□□ 0.26
CX3CL1-204ENST00000565912 NCAPD3P42695 1498 aa16.67■□□□□ 0.26
CX3CL1-204ENST00000565912 OSCARQ8IYS5 282 aa16.67■□□□□ 0.26
CX3CL1-204ENST00000565912 EVC2Q86UK5 1308 aa16.67■□□□□ 0.26
CX3CL1-204ENST00000565912 TSHZ2Q9NRE2 1034 aa16.67■□□□□ 0.26
CX3CL1-204ENST00000565912 COG6Q9Y2V7 657 aa16.67■□□□□ 0.26
CX3CL1-204ENST00000565912 E9PSI1 815 aa16.66■□□□□ 0.26
CX3CL1-204ENST00000565912 RUFY2Q8WXA3 655 aa16.66■□□□□ 0.26
CX3CL1-204ENST00000565912 VGFO15240 615 aaPredicted RBP16.66■□□□□ 0.26
CX3CL1-204ENST00000565912 IFIT2P09913 472 aaKnown RBP16.66■□□□□ 0.26
CX3CL1-204ENST00000565912 ANO2Q9NQ90 1003 aa16.66■□□□□ 0.26
CX3CL1-204ENST00000565912 FBXO3Q9UK99 471 aa16.66■□□□□ 0.26
CX3CL1-204ENST00000565912 ZKSCAN1P17029 563 aaPredicted RBP16.66■□□□□ 0.26
CX3CL1-204ENST00000565912 FAM161AQ3B820 660 aa16.66■□□□□ 0.26
CX3CL1-204ENST00000565912 CPLX1O14810 134 aa16.65■□□□□ 0.26
CX3CL1-204ENST00000565912 CCDC144AA2RUR9 1427 aa16.65■□□□□ 0.26
CX3CL1-204ENST00000565912 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.65■□□□□ 0.26
CX3CL1-204ENST00000565912 CCDC70Q6NSX1 233 aa16.64■□□□□ 0.25
CX3CL1-204ENST00000565912 MEX3CQ5U5Q3 659 aaKnown RBP16.63■□□□□ 0.25
CX3CL1-204ENST00000565912 CCDC47Q96A33 483 aaKnown RBP16.63■□□□□ 0.25
CX3CL1-204ENST00000565912 ZNF592Q92610 1267 aa16.63■□□□□ 0.25
CX3CL1-204ENST00000565912 CRBNQ96SW2 442 aa16.63■□□□□ 0.25
CX3CL1-204ENST00000565912 EXOC6Q8TAG9 804 aa16.63■□□□□ 0.25
CX3CL1-204ENST00000565912 PDE4AP27815 886 aa16.62■□□□□ 0.25
CX3CL1-204ENST00000565912 AQRO60306 1485 aaKnown RBP eCLIP16.62■□□□□ 0.253e-7■■■□□ 18.7
CX3CL1-204ENST00000565912 PSME1Q06323 249 aa16.62■□□□□ 0.25
CX3CL1-204ENST00000565912 TRDNQ13061 729 aa16.62■□□□□ 0.25
CX3CL1-204ENST00000565912 SKOR2Q2VWA4 1001 aaPredicted RBP16.62■□□□□ 0.25
CX3CL1-204ENST00000565912 NFXL1Q6ZNB6 911 aa16.62■□□□□ 0.25
CX3CL1-204ENST00000565912 IPO7O95373 1038 aaKnown RBP16.61■□□□□ 0.25
CX3CL1-204ENST00000565912 APAF1O14727 1248 aa16.61■□□□□ 0.25
CX3CL1-204ENST00000565912 SAMD1Q6SPF0 538 aaPredicted RBP16.61■□□□□ 0.25
CX3CL1-204ENST00000565912 CNKSR2Q8WXI2 1034 aa16.61■□□□□ 0.25
CX3CL1-204ENST00000565912 PATL2C9JE40 543 aaKnown RBP16.61■□□□□ 0.25
CX3CL1-204ENST00000565912 REC8O95072 547 aa16.61■□□□□ 0.25
CX3CL1-204ENST00000565912 DDX58O95786 925 aaKnown RBP16.61■□□□□ 0.25
CX3CL1-204ENST00000565912 DIAPH1O60610 1272 aaKnown RBP16.61■□□□□ 0.25
CX3CL1-204ENST00000565912 G3BP1Q13283 466 aaKnown RBP eCLIP16.61■□□□□ 0.25
CX3CL1-204ENST00000565912 UACAQ9BZF9 1416 aa16.61■□□□□ 0.25
CX3CL1-204ENST00000565912 KRI1Q8N9T8 703 aaKnown RBP16.6■□□□□ 0.25
CX3CL1-204ENST00000565912 KLHL34Q8N239 644 aa16.6■□□□□ 0.25
CX3CL1-204ENST00000565912 ANKRD20A12PQ8NF67 263 aa16.6■□□□□ 0.25
CX3CL1-204ENST00000565912 FKBP5Q13451 457 aaPredicted RBP16.6■□□□□ 0.25
CX3CL1-204ENST00000565912 CWC22Q9HCG8 908 aaKnown RBP16.59■□□□□ 0.25
CX3CL1-204ENST00000565912 RIPK4P57078 832 aa16.59■□□□□ 0.25
CX3CL1-204ENST00000565912 SETQ01105 290 aaPredicted RBP16.59■□□□□ 0.25
CX3CL1-204ENST00000565912 BICD2Q8TD16 824 aa16.59■□□□□ 0.25
CX3CL1-204ENST00000565912 RRP1P56182 461 aaKnown RBP16.59■□□□□ 0.25
CX3CL1-204ENST00000565912 CCDC43Q96MW1 224 aaKnown RBP16.58■□□□□ 0.25
CX3CL1-204ENST00000565912 ERICH2A1L162 156 aa16.58■□□□□ 0.24
CX3CL1-204ENST00000565912 DDX19BQ9UMR2 479 aa16.58■□□□□ 0.24
CX3CL1-204ENST00000565912 GPS2Q13227 327 aa16.58■□□□□ 0.24
CX3CL1-204ENST00000565912 RNF20Q5VTR2 975 aa16.57■□□□□ 0.24
CX3CL1-204ENST00000565912 API5Q9BZZ5 524 aaKnown RBP16.57■□□□□ 0.24
CX3CL1-204ENST00000565912 FOSBP53539 338 aa16.57■□□□□ 0.24
CX3CL1-204ENST00000565912 HOOK1Q9UJC3 728 aaKnown RBP16.56■□□□□ 0.24
CX3CL1-204ENST00000565912 VPS37CA5D8V6 355 aaPredicted RBP16.55■□□□□ 0.24
CX3CL1-204ENST00000565912 DZIP1LQ8IYY4 767 aaKnown RBP16.55■□□□□ 0.24
CX3CL1-204ENST00000565912 RBM33Q96EV2 1170 aaKnown RBP16.55■□□□□ 0.24
CX3CL1-204ENST00000565912 HOMER1Q86YM7 354 aa16.54■□□□□ 0.24
CX3CL1-204ENST00000565912 HSP90AA2PQ14568 343 aaPredicted RBP16.54■□□□□ 0.24
CX3CL1-204ENST00000565912 FYB1O15117 783 aa16.53■□□□□ 0.24
CX3CL1-204ENST00000565912 NEUROD6Q96NK8 337 aa16.53■□□□□ 0.24
CX3CL1-204ENST00000565912 TSPYL4Q9UJ04 414 aa16.53■□□□□ 0.24
CX3CL1-204ENST00000565912 PRKRIP1Q9H875 184 aaPredicted RBP16.53■□□□□ 0.24
CX3CL1-204ENST00000565912 DHX57Q6P158 1386 aaKnown RBP16.52■□□□□ 0.24
CX3CL1-204ENST00000565912 AIMP1Q12904 312 aaKnown RBP16.52■□□□□ 0.24
CX3CL1-204ENST00000565912 SMC3Q9UQE7 1217 aa16.52■□□□□ 0.23
CX3CL1-204ENST00000565912 GSE1Q14687 1217 aa16.52■□□□□ 0.23
CX3CL1-204ENST00000565912 RAPGEF4Q8WZA2 1011 aa16.52■□□□□ 0.23
CX3CL1-204ENST00000565912 USP47Q96K76 1375 aa16.51■□□□□ 0.23
CX3CL1-204ENST00000565912 RIC3Q7Z5B4 369 aa16.51■□□□□ 0.23
CX3CL1-204ENST00000565912 SAFBQ15424 915 aaKnown RBP eCLIP16.51■□□□□ 0.23
CX3CL1-204ENST00000565912 WASHC4Q2M389 1173 aa16.51■□□□□ 0.23
CX3CL1-204ENST00000565912 CCDC27Q2M243 656 aa16.51■□□□□ 0.23
CX3CL1-204ENST00000565912 NAP1L1P55209 391 aaKnown RBP16.5■□□□□ 0.23
CX3CL1-204ENST00000565912 ROCK1Q13464 1354 aa16.5■□□□□ 0.23
CX3CL1-204ENST00000565912 HMOX1P09601 288 aa16.5■□□□□ 0.23
CX3CL1-204ENST00000565912 NESP48681 1621 aa16.49■□□□□ 0.23
CX3CL1-204ENST00000565912 SASS6Q6UVJ0 657 aa16.49■□□□□ 0.23
CX3CL1-204ENST00000565912 PRDM2Q13029 1718 aa16.49■□□□□ 0.23
CX3CL1-204ENST00000565912 CT47A1Q5JQC4 288 aaPredicted RBP16.49■□□□□ 0.23
CX3CL1-204ENST00000565912 RALYLQ86SE5 291 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms