RNA–Protein interactions for RNA: ENST00000565697.1

CNOT1-208, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-208ENST00000565697 NOS1P29475 1434 aa14.93□□□□□ -0.02
CNOT1-208ENST00000565697 IQGAP3Q86VI3 1631 aa14.92□□□□□ -0.02
CNOT1-208ENST00000565697 UBR1Q8IWV7 1749 aa14.92□□□□□ -0.02
CNOT1-208ENST00000565697 REM2Q8IYK8 340 aaPredicted RBP14.92□□□□□ -0.02
CNOT1-208ENST00000565697 IDI1Q13907 227 aa14.91□□□□□ -0.02
CNOT1-208ENST00000565697 KDM5AP29375 1690 aaKnown RBP14.9□□□□□ -0.02
CNOT1-208ENST00000565697 MED14O60244 1454 aa14.9□□□□□ -0.02
CNOT1-208ENST00000565697 ZBTB12Q9Y330 459 aaPredicted RBP14.9□□□□□ -0.02
CNOT1-208ENST00000565697 EID1Q9Y6B2 187 aa14.9□□□□□ -0.02
CNOT1-208ENST00000565697 HFM1A2PYH4 1435 aa14.9□□□□□ -0.02
CNOT1-208ENST00000565697 NPHP4O75161 1426 aaPredicted RBP14.9□□□□□ -0.02
CNOT1-208ENST00000565697 NAIPQ13075 1403 aa14.9□□□□□ -0.02
CNOT1-208ENST00000565697 PIK3C2BO00750 1634 aa14.89□□□□□ -0.03
CNOT1-208ENST00000565697 SYNMO15061 1565 aa14.89□□□□□ -0.03
CNOT1-208ENST00000565697 NEURL4Q96JN8 1562 aa14.89□□□□□ -0.03
CNOT1-208ENST00000565697 SLIT1O75093 1534 aa14.88□□□□□ -0.03
CNOT1-208ENST00000565697 TXNDC2Q86VQ3 553 aa14.88□□□□□ -0.03
CNOT1-208ENST00000565697 ARHGAP23Q9P227 1491 aa14.88□□□□□ -0.03
CNOT1-208ENST00000565697 LTBP4Q8N2S1 1624 aa14.88□□□□□ -0.03
CNOT1-208ENST00000565697 IQSEC2Q5JU85 1478 aa14.87□□□□□ -0.03
CNOT1-208ENST00000565697 SCAF11Q99590 1463 aaKnown RBP14.87□□□□□ -0.03
CNOT1-208ENST00000565697 ZNF335Q9H4Z2 1342 aaPredicted RBP14.87□□□□□ -0.03
CNOT1-208ENST00000565697 E9PCH4 1651 aa14.87□□□□□ -0.03
CNOT1-208ENST00000565697 TMEM2Q9UHN6 1383 aa14.86□□□□□ -0.03
CNOT1-208ENST00000565697 HDGFP51858 240 aaKnown RBP14.86□□□□□ -0.03
CNOT1-208ENST00000565697 IQGAP1P46940 1657 aa14.85□□□□□ -0.03
CNOT1-208ENST00000565697 ADGRB3O60242 1522 aa14.85□□□□□ -0.03
CNOT1-208ENST00000565697 LTKP29376 864 aa14.84□□□□□ -0.03
CNOT1-208ENST00000565697 TRIM52Q96A61 297 aa14.84□□□□□ -0.03
CNOT1-208ENST00000565697 ACIN1Q9UKV3 1341 aaKnown RBP14.84□□□□□ -0.03
CNOT1-208ENST00000565697 CPS1P31327 1500 aa14.82□□□□□ -0.04
CNOT1-208ENST00000565697 CHGAP10645 457 aaKnown RBP14.81□□□□□ -0.04
CNOT1-208ENST00000565697 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.79□□□□□ -0.04
CNOT1-208ENST00000565697 SPHKAPQ2M3C7 1700 aa14.78□□□□□ -0.04
CNOT1-208ENST00000565697 TMEM131LA2VDJ0 1609 aa14.78□□□□□ -0.04
CNOT1-208ENST00000565697 PPP1R15AO75807 674 aaPredicted RBP14.78□□□□□ -0.04
CNOT1-208ENST00000565697 FXR2P51116 673 aaKnown RBP eCLIP14.78□□□□□ -0.044e-15■■□□□ 11.7
CNOT1-208ENST00000565697 SLC4A1APQ9BWU0 796 aaKnown RBP14.78□□□□□ -0.04
CNOT1-208ENST00000565697 BCANQ96GW7 911 aa14.77□□□□□ -0.05
CNOT1-208ENST00000565697 RIMS2Q9UQ26 1411 aa14.76□□□□□ -0.05
CNOT1-208ENST00000565697 PITPNM1O00562 1244 aa14.76□□□□□ -0.05
CNOT1-208ENST00000565697 MYO5BQ9ULV0 1848 aa14.76□□□□□ -0.05
CNOT1-208ENST00000565697 ZFYVE9O95405 1425 aa14.75□□□□□ -0.05
CNOT1-208ENST00000565697 SETD5Q9C0A6 1442 aa14.75□□□□□ -0.05
CNOT1-208ENST00000565697 PLEKHG1Q9ULL1 1385 aa14.74□□□□□ -0.05
CNOT1-208ENST00000565697 TRPM2O94759 1503 aa14.74□□□□□ -0.05
CNOT1-208ENST00000565697 UBAP1LF5GYI3 381 aa14.73□□□□□ -0.05
CNOT1-208ENST00000565697 TOM1O60784 492 aa14.72□□□□□ -0.05
CNOT1-208ENST00000565697 ZNF326Q5BKZ1 582 aaKnown RBP14.72□□□□□ -0.05
CNOT1-208ENST00000565697 KCNA6P17658 529 aa14.71□□□□□ -0.05
CNOT1-208ENST00000565697 SLC26A8Q96RN1 970 aa14.71□□□□□ -0.05
CNOT1-208ENST00000565697 MPHOSPH9Q99550 1183 aa14.7□□□□□ -0.06
CNOT1-208ENST00000565697 CLTCL1P53675 1640 aa14.7□□□□□ -0.06
CNOT1-208ENST00000565697 KIF1BO60333 1816 aa14.69□□□□□ -0.06
CNOT1-208ENST00000565697 TBX22Q9Y458 520 aa14.69□□□□□ -0.06
CNOT1-208ENST00000565697 LRRC7Q96NW7 1537 aa14.69□□□□□ -0.06
CNOT1-208ENST00000565697 STRCP1A6NGW2 1772 aa14.69□□□□□ -0.06
CNOT1-208ENST00000565697 NUTM2DQ5VT03 806 aaPredicted RBP14.68□□□□□ -0.06
CNOT1-208ENST00000565697 DIP2AQ14689 1571 aa14.66□□□□□ -0.06
CNOT1-208ENST00000565697 RAB3GAP2Q9H2M9 1393 aa14.66□□□□□ -0.06
CNOT1-208ENST00000565697 HRCP23327 699 aa14.66□□□□□ -0.06
CNOT1-208ENST00000565697 RPGRIP1LQ68CZ1 1315 aa14.66□□□□□ -0.06
CNOT1-208ENST00000565697 PIK3R4Q99570 1358 aa14.65□□□□□ -0.06
CNOT1-208ENST00000565697 ATF5Q9Y2D1 282 aaPredicted RBP14.65□□□□□ -0.06
CNOT1-208ENST00000565697 CCDC144AA2RUR9 1427 aa14.65□□□□□ -0.06
CNOT1-208ENST00000565697 NKTRP30414 1462 aaKnown RBP14.64□□□□□ -0.07
CNOT1-208ENST00000565697 VGFO15240 615 aaPredicted RBP14.64□□□□□ -0.07
CNOT1-208ENST00000565697 PROSER2Q86WR7 435 aaPredicted RBP14.64□□□□□ -0.07
CNOT1-208ENST00000565697 ADAMTS13Q76LX8 1427 aa14.64□□□□□ -0.07
CNOT1-208ENST00000565697 NWD1Q149M9 1564 aa14.64□□□□□ -0.07
CNOT1-208ENST00000565697 CHD2O14647 1828 aaKnown RBP14.62□□□□□ -0.07
CNOT1-208ENST00000565697 EVX2Q03828 476 aa14.62□□□□□ -0.07
CNOT1-208ENST00000565697 NEXMIFQ5QGS0 1516 aa14.61□□□□□ -0.07
CNOT1-208ENST00000565697 TMEM94Q12767 1356 aa14.61□□□□□ -0.07
CNOT1-208ENST00000565697 PIP4K2BP78356 416 aa14.61□□□□□ -0.07
CNOT1-208ENST00000565697 SETBP1Q9Y6X0 1596 aa14.6□□□□□ -0.07
CNOT1-208ENST00000565697 NCOA3Q9Y6Q9 1424 aa14.59□□□□□ -0.07
CNOT1-208ENST00000565697 XIRP1Q702N8 1843 aaKnown RBP14.58□□□□□ -0.08
CNOT1-208ENST00000565697 AMOTL2Q9Y2J4 779 aa14.58□□□□□ -0.08
CNOT1-208ENST00000565697 MSH6P52701 1360 aa14.58□□□□□ -0.08
CNOT1-208ENST00000565697 NRXN3Q9Y4C0 1643 aa14.56□□□□□ -0.08
CNOT1-208ENST00000565697 RGL3Q3MIN7 710 aa14.56□□□□□ -0.08
CNOT1-208ENST00000565697 ANKRD30BQ9BXX2 1392 aa14.56□□□□□ -0.08
CNOT1-208ENST00000565697 PPLO60437 1756 aa14.55□□□□□ -0.08
CNOT1-208ENST00000565697 C14orf37Q86TY3 774 aa14.55□□□□□ -0.08
CNOT1-208ENST00000565697 SPATA31E1Q6ZUB1 1445 aa14.55□□□□□ -0.08
CNOT1-208ENST00000565697 ALKQ9UM73 1620 aa14.55□□□□□ -0.08
CNOT1-208ENST00000565697 RBM33Q96EV2 1170 aaKnown RBP14.54□□□□□ -0.08
CNOT1-208ENST00000565697 PTPRUQ92729 1446 aa14.53□□□□□ -0.08
CNOT1-208ENST00000565697 METP08581 1390 aa14.53□□□□□ -0.08
CNOT1-208ENST00000565697 HSPA1LP34931 641 aa14.52□□□□□ -0.09
CNOT1-208ENST00000565697 FAM135BQ49AJ0 1406 aa14.51□□□□□ -0.09
CNOT1-208ENST00000565697 CADPS2Q86UW7 1296 aa14.51□□□□□ -0.09
CNOT1-208ENST00000565697 C19orf44Q9H6X5 657 aa14.51□□□□□ -0.09
CNOT1-208ENST00000565697 XRN1Q8IZH2 1706 aaKnown RBP14.51□□□□□ -0.09
CNOT1-208ENST00000565697 ATF3P18847 181 aa14.5□□□□□ -0.09
CNOT1-208ENST00000565697 SLAIN2Q9P270 581 aa14.49□□□□□ -0.09
CNOT1-208ENST00000565697 ADGRF5Q8IZF2 1346 aa14.48□□□□□ -0.09
CNOT1-208ENST00000565697 IFT172Q9UG01 1749 aa14.48□□□□□ -0.09
CNOT1-208ENST00000565697 DCCP43146 1447 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms