RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 PPP1R15AO75807 674 aaPredicted RBP27.42■■□□□ 1.98
CSPG4P13-201ENST00000565545 SENP3Q9H4L4 574 aaPredicted RBP27.42■■□□□ 1.98
CSPG4P13-201ENST00000565545 ERVK-7P63135 1459 aa27.41■■□□□ 1.98
CSPG4P13-201ENST00000565545 PHF23Q9BUL5 403 aaPredicted RBP27.39■■□□□ 1.98
CSPG4P13-201ENST00000565545 TXNDC2Q86VQ3 553 aa27.37■■□□□ 1.97
CSPG4P13-201ENST00000565545 IQGAP1P46940 1657 aa27.36■■□□□ 1.97
CSPG4P13-201ENST00000565545 L3MBTL2Q969R5 705 aa27.36■■□□□ 1.97
CSPG4P13-201ENST00000565545 MED1Q15648 1581 aaPredicted RBP27.35■■□□□ 1.97
CSPG4P13-201ENST00000565545 EID1Q9Y6B2 187 aa27.33■■□□□ 1.97
CSPG4P13-201ENST00000565545 LRRC7Q96NW7 1537 aa27.32■■□□□ 1.96
CSPG4P13-201ENST00000565545 LTKP29376 864 aa27.32■■□□□ 1.96
CSPG4P13-201ENST00000565545 STAG3Q9UJ98 1225 aa27.31■■□□□ 1.96
CSPG4P13-201ENST00000565545 SCAF11Q99590 1463 aaKnown RBP27.31■■□□□ 1.96
CSPG4P13-201ENST00000565545 CLTCL1P53675 1640 aa27.3■■□□□ 1.96
CSPG4P13-201ENST00000565545 NOS1P29475 1434 aa27.29■■□□□ 1.96
CSPG4P13-201ENST00000565545 CFAP65Q6ZU64 1925 aaKnown RBP27.28■■□□□ 1.96
CSPG4P13-201ENST00000565545 ALKQ9UM73 1620 aa27.26■■□□□ 1.95
CSPG4P13-201ENST00000565545 KIF1BO60333 1816 aa27.25■■□□□ 1.95
CSPG4P13-201ENST00000565545 SPATA31E1Q6ZUB1 1445 aa27.24■■□□□ 1.95
CSPG4P13-201ENST00000565545 UBR1Q8IWV7 1749 aa27.23■■□□□ 1.95
CSPG4P13-201ENST00000565545 STRCP1A6NGW2 1772 aa27.22■■□□□ 1.95
CSPG4P13-201ENST00000565545 ARHGAP23Q9P227 1491 aa27.21■■□□□ 1.95
CSPG4P13-201ENST00000565545 PIK3C2BO00750 1634 aa27.2■■□□□ 1.95
CSPG4P13-201ENST00000565545 SYNMO15061 1565 aa27.2■■□□□ 1.94
CSPG4P13-201ENST00000565545 STAC3Q96MF2 364 aa27.2■■□□□ 1.94
CSPG4P13-201ENST00000565545 SLIT1O75093 1534 aa27.2■■□□□ 1.94
CSPG4P13-201ENST00000565545 SLC52A1Q9NWF4 448 aa27.19■■□□□ 1.94
CSPG4P13-201ENST00000565545 TMEM2Q9UHN6 1383 aa27.19■■□□□ 1.94
CSPG4P13-201ENST00000565545 IDI1Q13907 227 aa27.17■■□□□ 1.94
CSPG4P13-201ENST00000565545 RGL3Q3MIN7 710 aa27.15■■□□□ 1.94
CSPG4P13-201ENST00000565545 DCAF11Q8TEB1 546 aa27.15■■□□□ 1.94
CSPG4P13-201ENST00000565545 ADGRB3O60242 1522 aa27.13■■□□□ 1.93
CSPG4P13-201ENST00000565545 BCANQ96GW7 911 aa27.12■■□□□ 1.93
CSPG4P13-201ENST00000565545 SLC26A8Q96RN1 970 aa27.12■■□□□ 1.93
CSPG4P13-201ENST00000565545 ZNF316A6NFI3 1004 aaPredicted RBP27.11■■□□□ 1.93
CSPG4P13-201ENST00000565545 KCNA6P17658 529 aa27.11■■□□□ 1.93
CSPG4P13-201ENST00000565545 NBPF8Q3BBV2 869 aa27.11■■□□□ 1.93
CSPG4P13-201ENST00000565545 PROSER2Q86WR7 435 aaPredicted RBP27.1■■□□□ 1.93
CSPG4P13-201ENST00000565545 TMEM94Q12767 1356 aa27.09■■□□□ 1.93
CSPG4P13-201ENST00000565545 RBM33Q96EV2 1170 aaKnown RBP27.07■■□□□ 1.92
CSPG4P13-201ENST00000565545 KDM2AQ9Y2K7 1162 aa27.07■■□□□ 1.92
CSPG4P13-201ENST00000565545 RPGRIP1LQ68CZ1 1315 aa27.07■■□□□ 1.92
CSPG4P13-201ENST00000565545 PRAG1Q86YV5 1406 aa27.06■■□□□ 1.92
CSPG4P13-201ENST00000565545 IFT172Q9UG01 1749 aa27.05■■□□□ 1.92
CSPG4P13-201ENST00000565545 FAM135BQ49AJ0 1406 aa27.05■■□□□ 1.92
CSPG4P13-201ENST00000565545 RALGAPBQ86X10 1494 aa27.04■■□□□ 1.92
CSPG4P13-201ENST00000565545 MYOM2P54296 1465 aa27.03■■□□□ 1.92
CSPG4P13-201ENST00000565545 CHGAP10645 457 aaKnown RBP27.02■■□□□ 1.92
CSPG4P13-201ENST00000565545 RGS17Q9UGC6 210 aaPredicted RBP27.02■■□□□ 1.92
CSPG4P13-201ENST00000565545 ZNF326Q5BKZ1 582 aaKnown RBP27.01■■□□□ 1.91
CSPG4P13-201ENST00000565545 TMEM131LA2VDJ0 1609 aa27.01■■□□□ 1.91
CSPG4P13-201ENST00000565545 PPLO60437 1756 aa26.99■■□□□ 1.91
CSPG4P13-201ENST00000565545 TRPM1Q7Z4N2 1603 aa26.99■■□□□ 1.91
CSPG4P13-201ENST00000565545 HDGFP51858 240 aaKnown RBP26.97■■□□□ 1.91
CSPG4P13-201ENST00000565545 KDM5AP29375 1690 aaKnown RBP26.96■■□□□ 1.91
CSPG4P13-201ENST00000565545 XIRP1Q702N8 1843 aaKnown RBP26.96■■□□□ 1.91
CSPG4P13-201ENST00000565545 MYO5BQ9ULV0 1848 aa26.95■■□□□ 1.9
CSPG4P13-201ENST00000565545 KIAA1210Q9ULL0 1709 aa26.94■■□□□ 1.9
CSPG4P13-201ENST00000565545 EIF4G2P78344 907 aaKnown RBP eCLIP26.94■■□□□ 1.9
CSPG4P13-201ENST00000565545 MSH6P52701 1360 aa26.94■■□□□ 1.9
CSPG4P13-201ENST00000565545 NRXN1Q9ULB1 1477 aa26.93■■□□□ 1.9
CSPG4P13-201ENST00000565545 LAMC1P11047 1609 aa26.93■■□□□ 1.9
CSPG4P13-201ENST00000565545 ZFYVE9O95405 1425 aa26.91■■□□□ 1.9
CSPG4P13-201ENST00000565545 NEXMIFQ5QGS0 1516 aa26.91■■□□□ 1.9
CSPG4P13-201ENST00000565545 SLAIN2Q9P270 581 aa26.91■■□□□ 1.9
CSPG4P13-201ENST00000565545 GPRASP1Q5JY77 1395 aa26.91■■□□□ 1.9
CSPG4P13-201ENST00000565545 ROCK2O75116 1388 aaKnown RBP26.9■■□□□ 1.9
CSPG4P13-201ENST00000565545 VGFO15240 615 aaPredicted RBP26.9■■□□□ 1.9
CSPG4P13-201ENST00000565545 NKTRP30414 1462 aaKnown RBP26.88■■□□□ 1.89
CSPG4P13-201ENST00000565545 POTEAQ6S8J7 498 aa26.88■■□□□ 1.89
CSPG4P13-201ENST00000565545 C14orf37Q86TY3 774 aa26.87■■□□□ 1.89
CSPG4P13-201ENST00000565545 CARD11Q9BXL7 1154 aa26.87■■□□□ 1.89
CSPG4P13-201ENST00000565545 PLEKHG1Q9ULL1 1385 aa26.86■■□□□ 1.89
CSPG4P13-201ENST00000565545 RIMS2Q9UQ26 1411 aa26.86■■□□□ 1.89
CSPG4P13-201ENST00000565545 ADGRF5Q8IZF2 1346 aa26.86■■□□□ 1.89
CSPG4P13-201ENST00000565545 HSPA5P11021 654 aaKnown RBP26.85■■□□□ 1.89
CSPG4P13-201ENST00000565545 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.85■■□□□ 1.89
CSPG4P13-201ENST00000565545 ROBO1Q9Y6N7 1651 aa26.85■■□□□ 1.89
CSPG4P13-201ENST00000565545 TBX22Q9Y458 520 aa26.83■■□□□ 1.89
CSPG4P13-201ENST00000565545 USP47Q96K76 1375 aa26.83■■□□□ 1.88
CSPG4P13-201ENST00000565545 PIK3C2GO75747 1445 aa26.82■■□□□ 1.88
CSPG4P13-201ENST00000565545 NUTM2DQ5VT03 806 aaPredicted RBP26.82■■□□□ 1.88
CSPG4P13-201ENST00000565545 NWD1Q149M9 1564 aa26.81■■□□□ 1.88
CSPG4P13-201ENST00000565545 NBPF1Q3BBV0 1214 aa26.8■■□□□ 1.88
CSPG4P13-201ENST00000565545 SETBP1Q9Y6X0 1596 aa26.79■■□□□ 1.88
CSPG4P13-201ENST00000565545 C14orf93Q9H972 538 aaKnown RBP26.78■■□□□ 1.88
CSPG4P13-201ENST00000565545 JCADQ9P266 1359 aa26.78■■□□□ 1.88
CSPG4P13-201ENST00000565545 ATF3P18847 181 aa26.75■■□□□ 1.87
CSPG4P13-201ENST00000565545 CFAP70Q5T0N1 1121 aa26.74■■□□□ 1.87
CSPG4P13-201ENST00000565545 HIRIP3Q9BW71 556 aaPredicted RBP26.74■■□□□ 1.87
CSPG4P13-201ENST00000565545 CADPS2Q86UW7 1296 aa26.73■■□□□ 1.87
CSPG4P13-201ENST00000565545 C19orf44Q9H6X5 657 aa26.72■■□□□ 1.87
CSPG4P13-201ENST00000565545 NCOA3Q9Y6Q9 1424 aa26.72■■□□□ 1.87
CSPG4P13-201ENST00000565545 MEX3CQ5U5Q3 659 aaKnown RBP26.71■■□□□ 1.87
CSPG4P13-201ENST00000565545 PHLPP1O60346 1717 aa26.7■■□□□ 1.86
CSPG4P13-201ENST00000565545 CHD2O14647 1828 aaKnown RBP26.69■■□□□ 1.86
CSPG4P13-201ENST00000565545 ADAMTS13Q76LX8 1427 aa26.68■■□□□ 1.86
CSPG4P13-201ENST00000565545 DIEXFQ68CQ4 756 aaKnown RBP26.68■■□□□ 1.86
CSPG4P13-201ENST00000565545 AMOTL2Q9Y2J4 779 aa26.67■■□□□ 1.86
CSPG4P13-201ENST00000565545 EIF3AQ14152 1382 aaKnown RBP26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms