RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 TMEM134Q9H6X4 195 aa9.71□□□□□ -0.86
CDH1-207ENST00000564745 FAM205CA6NFA0 338 aa9.7□□□□□ -0.86
CDH1-207ENST00000564745 SUPT5HO00267 1087 aaKnown RBP9.7□□□□□ -0.86
CDH1-207ENST00000564745 ARHGAP33O14559 1287 aa9.7□□□□□ -0.86
CDH1-207ENST00000564745 CD46P15529 392 aa9.7□□□□□ -0.86
CDH1-207ENST00000564745 RSPH6AQ9H0K4 717 aa9.7□□□□□ -0.86
CDH1-207ENST00000564745 POTEB3A0JP26 581 aa9.69□□□□□ -0.86
CDH1-207ENST00000564745 ONECUT3O60422 494 aaPredicted RBP9.69□□□□□ -0.86
CDH1-207ENST00000564745 POTEBQ6S5H4 581 aa9.69□□□□□ -0.86
CDH1-207ENST00000564745 KCNH8Q96L42 1107 aa9.69□□□□□ -0.86
CDH1-207ENST00000564745 HS3ST6Q96QI5 342 aa9.69□□□□□ -0.86
CDH1-207ENST00000564745 SEPT9Q9UHD8 586 aaPredicted RBP9.69□□□□□ -0.86
CDH1-207ENST00000564745 FBXO31Q5XUX0 539 aaPredicted RBP9.68□□□□□ -0.86
CDH1-207ENST00000564745 SPIRE2Q8WWL2 714 aa9.67□□□□□ -0.86
CDH1-207ENST00000564745 LIMD1Q9UGP4 676 aa9.67□□□□□ -0.86
CDH1-207ENST00000564745 ATP1B4Q9UN42 357 aaPredicted RBP9.67□□□□□ -0.86
CDH1-207ENST00000564745 KRTAP3-3Q9BYR6 98 aa9.66□□□□□ -0.86
CDH1-207ENST00000564745 KRTAP3-2Q9BYR7 98 aa9.66□□□□□ -0.86
CDH1-207ENST00000564745 CLK2P49760 499 aaKnown RBP9.65□□□□□ -0.86
CDH1-207ENST00000564745 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.65□□□□□ -0.86
CDH1-207ENST00000564745 RABGEF1Q9UJ41 708 aa9.65□□□□□ -0.86
CDH1-207ENST00000564745 SWT1Q5T5J6 900 aaKnown RBP9.64□□□□□ -0.87
CDH1-207ENST00000564745 SULF1Q8IWU6 871 aa9.64□□□□□ -0.87
CDH1-207ENST00000564745 ZNF687Q8N1G0 1237 aa9.64□□□□□ -0.87
CDH1-207ENST00000564745 RDH13Q8NBN7 331 aa9.64□□□□□ -0.87
CDH1-207ENST00000564745 ZMYND15Q9H091 742 aa9.64□□□□□ -0.87
CDH1-207ENST00000564745 VPS9D1Q9Y2B5 631 aa9.64□□□□□ -0.87
CDH1-207ENST00000564745 SLC4A5Q9BY07 1137 aa9.63□□□□□ -0.87
CDH1-207ENST00000564745 MOXD2PA6NHM9 499 aa9.62□□□□□ -0.87
CDH1-207ENST00000564745 SLC10A3P09131 477 aa9.62□□□□□ -0.87
CDH1-207ENST00000564745 NDUFV2P19404 249 aa9.62□□□□□ -0.87
CDH1-207ENST00000564745 RIC3Q7Z5B4 369 aa9.62□□□□□ -0.87
CDH1-207ENST00000564745 PBX2P40425 430 aa9.61□□□□□ -0.87
CDH1-207ENST00000564745 NUTM1Q86Y26 1132 aa9.61□□□□□ -0.87
CDH1-207ENST00000564745 CSPP1Q1MSJ5 1256 aa9.6□□□□□ -0.87
CDH1-207ENST00000564745 FLIIQ13045 1269 aa9.59□□□□□ -0.87
CDH1-207ENST00000564745 DIXDC1Q155Q3 683 aa9.59□□□□□ -0.87
CDH1-207ENST00000564745 RSBN1LQ6PCB5 846 aaPredicted RBP9.59□□□□□ -0.87
CDH1-207ENST00000564745 SPTLC1O15269 473 aa9.58□□□□□ -0.88
CDH1-207ENST00000564745 GCGRP47871 477 aa9.58□□□□□ -0.88
CDH1-207ENST00000564745 MCM6Q14566 821 aa9.58□□□□□ -0.88
CDH1-207ENST00000564745 FAM98CQ17RN3 349 aaKnown RBP9.58□□□□□ -0.88
CDH1-207ENST00000564745 HLA-CQ95604 372 aa9.58□□□□□ -0.88
CDH1-207ENST00000564745 PCDHB15Q9Y5E8 787 aa9.58□□□□□ -0.88
CDH1-207ENST00000564745 BHMG1C9JSJ3 638 aaPredicted RBP9.57□□□□□ -0.88
CDH1-207ENST00000564745 RFC5P40937 340 aa9.57□□□□□ -0.88
CDH1-207ENST00000564745 QPCTQ16769 361 aa9.57□□□□□ -0.88
CDH1-207ENST00000564745 SAMD7Q7Z3H4 446 aa9.57□□□□□ -0.88
CDH1-207ENST00000564745 CLUAP1Q96AJ1 413 aa9.57□□□□□ -0.88
CDH1-207ENST00000564745 KDM4AO75164 1064 aa9.56□□□□□ -0.88
CDH1-207ENST00000564745 GUCA2AQ02747 115 aa9.55□□□□□ -0.88
CDH1-207ENST00000564745 CABLES1Q8TDN4 633 aa9.54□□□□□ -0.88
CDH1-207ENST00000564745 SNRKQ9NRH2 765 aa9.54□□□□□ -0.88
CDH1-207ENST00000564745 HOXA2O43364 376 aa9.53□□□□□ -0.88
CDH1-207ENST00000564745 RNF40O75150 1001 aa9.53□□□□□ -0.88
CDH1-207ENST00000564745 LSM11P83369 360 aaKnown RBP eCLIP9.53□□□□□ -0.88
CDH1-207ENST00000564745 RTL5Q5HYW3 569 aaPredicted RBP9.53□□□□□ -0.88
CDH1-207ENST00000564745 PPP2R2DQ66LE6 453 aa9.53□□□□□ -0.88
CDH1-207ENST00000564745 ZFRQ96KR1 1074 aaKnown RBP9.53□□□□□ -0.88
CDH1-207ENST00000564745 TK2O00142 265 aa9.52□□□□□ -0.89
CDH1-207ENST00000564745 LILRB3O75022 631 aa9.52□□□□□ -0.89
CDH1-207ENST00000564745 TUSC1Q2TAM9 212 aa9.52□□□□□ -0.89
CDH1-207ENST00000564745 ADGRD1Q6QNK2 874 aa9.52□□□□□ -0.89
CDH1-207ENST00000564745 LAPTM4BQ86VI4 370 aa9.52□□□□□ -0.89
CDH1-207ENST00000564745 POM121Q96HA1 1249 aa9.52□□□□□ -0.89
CDH1-207ENST00000564745 NBPF3Q9H094 633 aa9.52□□□□□ -0.89
CDH1-207ENST00000564745 PCDHGC3Q9UN70 934 aa9.52□□□□□ -0.89
CDH1-207ENST00000564745 UBTFP17480 764 aaKnown RBP9.51□□□□□ -0.89
CDH1-207ENST00000564745 HDGFP51858 240 aaKnown RBP9.51□□□□□ -0.89
CDH1-207ENST00000564745 RSPH4AQ5TD94 716 aa9.51□□□□□ -0.89
CDH1-207ENST00000564745 CFHP08603 1231 aa9.5□□□□□ -0.89
CDH1-207ENST00000564745 FDX1P10109 184 aa9.5□□□□□ -0.89
CDH1-207ENST00000564745 GJA5P36382 358 aa9.5□□□□□ -0.89
CDH1-207ENST00000564745 FUT2Q10981 343 aa9.5□□□□□ -0.89
CDH1-207ENST00000564745 SLF2Q8IX21 1173 aa9.5□□□□□ -0.89
CDH1-207ENST00000564745 MRPL50Q8N5N7 158 aaKnown RBP9.5□□□□□ -0.89
CDH1-207ENST00000564745 C1orf115Q9H7X2 142 aa9.5□□□□□ -0.89
CDH1-207ENST00000564745 ARID3CA6NKF2 412 aa9.49□□□□□ -0.89
CDH1-207ENST00000564745 HRO43593 1189 aa9.49□□□□□ -0.89
CDH1-207ENST00000564745 USP46P62068 366 aa9.49□□□□□ -0.89
CDH1-207ENST00000564745 HRCP23327 699 aa9.48□□□□□ -0.89
CDH1-207ENST00000564745 SPDYE5A6NIY4 337 aa9.47□□□□□ -0.89
CDH1-207ENST00000564745 NUTM2BA6NNL0 878 aaPredicted RBP9.47□□□□□ -0.89
CDH1-207ENST00000564745 NUTM2EB1AL46 878 aaPredicted RBP9.47□□□□□ -0.89
CDH1-207ENST00000564745 NUTM2DQ5VT03 806 aaPredicted RBP9.47□□□□□ -0.89
CDH1-207ENST00000564745 ANKRD13DQ6ZTN6 518 aa9.47□□□□□ -0.89
CDH1-207ENST00000564745 NUTM2AQ8IVF1 878 aaPredicted RBP9.47□□□□□ -0.89
CDH1-207ENST00000564745 BANK1Q8NDB2 785 aa9.47□□□□□ -0.89
CDH1-207ENST00000564745 A6NJR5 290 aa9.46□□□□□ -0.9
CDH1-207ENST00000564745 AP1G2O75843 785 aa9.46□□□□□ -0.9
CDH1-207ENST00000564745 TMEM259Q4ZIN3 620 aa9.46□□□□□ -0.9
CDH1-207ENST00000564745 MTMR14Q8NCE2 650 aa9.46□□□□□ -0.9
CDH1-207ENST00000564745 SYMPKQ92797 1274 aaKnown RBP9.45□□□□□ -0.9
CDH1-207ENST00000564745 ZBTB3Q9H5J0 574 aa9.45□□□□□ -0.9
CDH1-207ENST00000564745 TRAK2O60296 914 aa9.44□□□□□ -0.9
CDH1-207ENST00000564745 SLC4A3P48751 1232 aa9.44□□□□□ -0.9
CDH1-207ENST00000564745 PUS10Q3MIT2 529 aaKnown RBP9.44□□□□□ -0.9
CDH1-207ENST00000564745 PRPF38BQ5VTL8 546 aaKnown RBP9.44□□□□□ -0.9
CDH1-207ENST00000564745 LRCH3Q96II8 777 aa9.44□□□□□ -0.9
CDH1-207ENST00000564745 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms