RNA–Protein interactions for RNA: ENST00000564529.1

SCAMP2-205, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-205ENST00000564529 STAG3Q9UJ98 1225 aa22.75■■□□□ 1.23
SCAMP2-205ENST00000564529 TMEM94Q12767 1356 aa22.74■■□□□ 1.23
SCAMP2-205ENST00000564529 IDI1Q13907 227 aa22.72■■□□□ 1.23
SCAMP2-205ENST00000564529 KCNA6P17658 529 aa22.71■■□□□ 1.23
SCAMP2-205ENST00000564529 IQGAP3Q86VI3 1631 aa22.71■■□□□ 1.23
SCAMP2-205ENST00000564529 SLC26A8Q96RN1 970 aa22.7■■□□□ 1.22
SCAMP2-205ENST00000564529 EFCAB6Q5THR3 1501 aa22.69■■□□□ 1.22
SCAMP2-205ENST00000564529 RBM33Q96EV2 1170 aaKnown RBP22.69■■□□□ 1.22
SCAMP2-205ENST00000564529 POTEAQ6S8J7 498 aa22.68■■□□□ 1.22
SCAMP2-205ENST00000564529 PROSER2Q86WR7 435 aaPredicted RBP22.68■■□□□ 1.22
SCAMP2-205ENST00000564529 TRIM52Q96A61 297 aa22.68■■□□□ 1.22
SCAMP2-205ENST00000564529 TET3O43151 1660 aa22.67■■□□□ 1.22
SCAMP2-205ENST00000564529 RPRD2Q5VT52 1461 aaKnown RBP22.66■■□□□ 1.22
SCAMP2-205ENST00000564529 KDM5AP29375 1690 aaKnown RBP22.65■■□□□ 1.22
SCAMP2-205ENST00000564529 MPHOSPH9Q99550 1183 aa22.64■■□□□ 1.21
SCAMP2-205ENST00000564529 ROBO1Q9Y6N7 1651 aa22.63■■□□□ 1.21
SCAMP2-205ENST00000564529 SLC4A1APQ9BWU0 796 aaKnown RBP22.62■■□□□ 1.21
SCAMP2-205ENST00000564529 NOS1P29475 1434 aa22.62■■□□□ 1.21
SCAMP2-205ENST00000564529 PCGF6Q9BYE7 350 aa22.61■■□□□ 1.21
SCAMP2-205ENST00000564529 ADGRB3O60242 1522 aa22.59■■□□□ 1.21
SCAMP2-205ENST00000564529 BCANQ96GW7 911 aa22.59■■□□□ 1.21
SCAMP2-205ENST00000564529 NKTRP30414 1462 aaKnown RBP22.59■■□□□ 1.21
SCAMP2-205ENST00000564529 SLC52A1Q9NWF4 448 aa22.58■■□□□ 1.21
SCAMP2-205ENST00000564529 NWD1Q149M9 1564 aa22.58■■□□□ 1.2
SCAMP2-205ENST00000564529 SLAIN2Q9P270 581 aa22.57■■□□□ 1.2
SCAMP2-205ENST00000564529 MSH6P52701 1360 aa22.57■■□□□ 1.2
SCAMP2-205ENST00000564529 E9PCH4 1651 aa22.55■■□□□ 1.2
SCAMP2-205ENST00000564529 ZFYVE9O95405 1425 aa22.51■■□□□ 1.19
SCAMP2-205ENST00000564529 JCADQ9P266 1359 aa22.5■■□□□ 1.19
SCAMP2-205ENST00000564529 PLEKHG1Q9ULL1 1385 aa22.5■■□□□ 1.19
SCAMP2-205ENST00000564529 PHLPP1O60346 1717 aa22.5■■□□□ 1.19
SCAMP2-205ENST00000564529 PPP1R15AO75807 674 aaPredicted RBP22.48■■□□□ 1.19
SCAMP2-205ENST00000564529 RIMS2Q9UQ26 1411 aa22.48■■□□□ 1.19
SCAMP2-205ENST00000564529 CHD2O14647 1828 aaKnown RBP22.46■■□□□ 1.19
SCAMP2-205ENST00000564529 HDGFP51858 240 aaKnown RBP22.46■■□□□ 1.19
SCAMP2-205ENST00000564529 FOXD1Q16676 465 aa22.46■■□□□ 1.19
SCAMP2-205ENST00000564529 TBX22Q9Y458 520 aa22.45■■□□□ 1.18
SCAMP2-205ENST00000564529 ANKRD30BQ9BXX2 1392 aa22.45■■□□□ 1.18
SCAMP2-205ENST00000564529 SETD1AO15047 1707 aaKnown RBP22.44■■□□□ 1.18
SCAMP2-205ENST00000564529 MYO5BQ9ULV0 1848 aa22.44■■□□□ 1.18
SCAMP2-205ENST00000564529 TRPM2O94759 1503 aa22.43■■□□□ 1.18
SCAMP2-205ENST00000564529 DHX57Q6P158 1386 aaKnown RBP22.43■■□□□ 1.18
SCAMP2-205ENST00000564529 TMEM131LA2VDJ0 1609 aa22.42■■□□□ 1.18
SCAMP2-205ENST00000564529 COL16A1Q07092 1604 aaPredicted RBP22.42■■□□□ 1.18
SCAMP2-205ENST00000564529 NCOA3Q9Y6Q9 1424 aa22.42■■□□□ 1.18
SCAMP2-205ENST00000564529 C14orf37Q86TY3 774 aa22.41■■□□□ 1.18
SCAMP2-205ENST00000564529 SPHKAPQ2M3C7 1700 aa22.4■■□□□ 1.18
SCAMP2-205ENST00000564529 LRP6O75581 1613 aa22.4■■□□□ 1.18
SCAMP2-205ENST00000564529 CHGAP10645 457 aaKnown RBP22.4■■□□□ 1.18
SCAMP2-205ENST00000564529 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.4■■□□□ 1.18
SCAMP2-205ENST00000564529 SPATA31A6Q5VVP1 1343 aa22.39■■□□□ 1.18
SCAMP2-205ENST00000564529 NUTM2DQ5VT03 806 aaPredicted RBP22.39■■□□□ 1.17
SCAMP2-205ENST00000564529 ADAMTS13Q76LX8 1427 aa22.38■■□□□ 1.17
SCAMP2-205ENST00000564529 MEX3CQ5U5Q3 659 aaKnown RBP22.37■■□□□ 1.17
SCAMP2-205ENST00000564529 CADPS2Q86UW7 1296 aa22.37■■□□□ 1.17
SCAMP2-205ENST00000564529 C19orf44Q9H6X5 657 aa22.37■■□□□ 1.17
SCAMP2-205ENST00000564529 ATF3P18847 181 aa22.35■■□□□ 1.17
SCAMP2-205ENST00000564529 ZNF772Q68DY9 489 aaPredicted RBP22.35■■□□□ 1.17
SCAMP2-205ENST00000564529 CCDC144AA2RUR9 1427 aa22.34■■□□□ 1.17
SCAMP2-205ENST00000564529 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.34■■□□□ 1.17
SCAMP2-205ENST00000564529 AHDC1Q5TGY3 1603 aaPredicted RBP22.33■■□□□ 1.17
SCAMP2-205ENST00000564529 PIK3R4Q99570 1358 aa22.33■■□□□ 1.17
SCAMP2-205ENST00000564529 CLTCL1P53675 1640 aa22.32■■□□□ 1.16
SCAMP2-205ENST00000564529 UPF1Q92900 1129 aaKnown RBP eCLIP22.32■■□□□ 1.16
SCAMP2-205ENST00000564529 DIP2AQ14689 1571 aa22.31■■□□□ 1.16
SCAMP2-205ENST00000564529 AMOTL2Q9Y2J4 779 aa22.31■■□□□ 1.16
SCAMP2-205ENST00000564529 BRINP3Q76B58 766 aa22.3■■□□□ 1.16
SCAMP2-205ENST00000564529 SPATA31E1Q6ZUB1 1445 aa22.29■■□□□ 1.16
SCAMP2-205ENST00000564529 PTPRUQ92729 1446 aa22.29■■□□□ 1.16
SCAMP2-205ENST00000564529 SHPRHQ149N8 1683 aa22.29■■□□□ 1.16
SCAMP2-205ENST00000564529 RPGRIP1LQ68CZ1 1315 aa22.27■■□□□ 1.16
SCAMP2-205ENST00000564529 CLSPNQ9HAW4 1339 aa22.27■■□□□ 1.16
SCAMP2-205ENST00000564529 NUTM2BA6NNL0 878 aaPredicted RBP22.26■■□□□ 1.15
SCAMP2-205ENST00000564529 NUTM2EB1AL46 878 aaPredicted RBP22.26■■□□□ 1.15
SCAMP2-205ENST00000564529 RXRBP28702 533 aa22.26■■□□□ 1.15
SCAMP2-205ENST00000564529 NUTM2AQ8IVF1 878 aaPredicted RBP22.26■■□□□ 1.15
SCAMP2-205ENST00000564529 DCCP43146 1447 aa22.22■■□□□ 1.15
SCAMP2-205ENST00000564529 KIF1BO60333 1816 aa22.21■■□□□ 1.15
SCAMP2-205ENST00000564529 AFF2P51816 1311 aa22.2■■□□□ 1.14
SCAMP2-205ENST00000564529 ASXL1Q8IXJ9 1541 aa22.2■■□□□ 1.14
SCAMP2-205ENST00000564529 STAC3Q96MF2 364 aa22.19■■□□□ 1.14
SCAMP2-205ENST00000564529 CDK12Q9NYV4 1490 aaPredicted RBP22.18■■□□□ 1.14
SCAMP2-205ENST00000564529 MST1RQ04912 1400 aa22.18■■□□□ 1.14
SCAMP2-205ENST00000564529 SIN3AQ96ST3 1273 aa22.18■■□□□ 1.14
SCAMP2-205ENST00000564529 NRXN3Q9Y4C0 1643 aa22.17■■□□□ 1.14
SCAMP2-205ENST00000564529 ZNF326Q5BKZ1 582 aaKnown RBP22.17■■□□□ 1.14
SCAMP2-205ENST00000564529 XRN1Q8IZH2 1706 aaKnown RBP22.17■■□□□ 1.14
SCAMP2-205ENST00000564529 METP08581 1390 aa22.16■■□□□ 1.14
SCAMP2-205ENST00000564529 VGFO15240 615 aaPredicted RBP22.16■■□□□ 1.14
SCAMP2-205ENST00000564529 NEXMIFQ5QGS0 1516 aa22.16■■□□□ 1.14
SCAMP2-205ENST00000564529 RGL3Q3MIN7 710 aa22.15■■□□□ 1.14
SCAMP2-205ENST00000564529 DDX17Q92841 729 aaKnown RBP22.15■■□□□ 1.14
SCAMP2-205ENST00000564529 LRRC59Q96AG4 307 aaKnown RBP22.15■■□□□ 1.14
SCAMP2-205ENST00000564529 SETBP1Q9Y6X0 1596 aa22.15■■□□□ 1.14
SCAMP2-205ENST00000564529 NHSL1Q5SYE7 1610 aa22.13■■□□□ 1.13
SCAMP2-205ENST00000564529 C8orf37Q96NL8 207 aa22.12■■□□□ 1.13
SCAMP2-205ENST00000564529 QTRT2Q9H974 415 aaKnown RBP22.11■■□□□ 1.13
SCAMP2-205ENST00000564529 PNPLA6Q8IY17 1366 aa22.11■■□□□ 1.13
SCAMP2-205ENST00000564529 CCER1Q8TC90 406 aaPredicted RBP22.1■■□□□ 1.13
SCAMP2-205ENST00000564529 ADGRL3Q9HAR2 1447 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms