RNA–Protein interactions for RNA: ENST00000564342.5

NSMCE1-207, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-207ENST00000564342 IQGAP1P46940 1657 aa12.5□□□□□ -0.41
NSMCE1-207ENST00000564342 MYO5BQ9ULV0 1848 aa12.48□□□□□ -0.41
NSMCE1-207ENST00000564342 ADGRB3O60242 1522 aa12.48□□□□□ -0.41
NSMCE1-207ENST00000564342 NUP155O75694 1391 aa12.48□□□□□ -0.41
NSMCE1-207ENST00000564342 ANKLE2Q86XL3 938 aa12.48□□□□□ -0.41
NSMCE1-207ENST00000564342 HFM1A2PYH4 1435 aa12.47□□□□□ -0.41
NSMCE1-207ENST00000564342 NPHP4O75161 1426 aaPredicted RBP12.47□□□□□ -0.41
NSMCE1-207ENST00000564342 IDI1Q13907 227 aa12.47□□□□□ -0.41
NSMCE1-207ENST00000564342 FBXO41Q8TF61 875 aa12.47□□□□□ -0.41
NSMCE1-207ENST00000564342 ZNF335Q9H4Z2 1342 aaPredicted RBP12.46□□□□□ -0.41
NSMCE1-207ENST00000564342 HAX1O00165 279 aa12.46□□□□□ -0.41
NSMCE1-207ENST00000564342 SCAF11Q99590 1463 aaKnown RBP12.46□□□□□ -0.42
NSMCE1-207ENST00000564342 SPHKAPQ2M3C7 1700 aa12.45□□□□□ -0.42
NSMCE1-207ENST00000564342 TMEM131LA2VDJ0 1609 aa12.45□□□□□ -0.42
NSMCE1-207ENST00000564342 IQSEC2Q5JU85 1478 aa12.45□□□□□ -0.42
NSMCE1-207ENST00000564342 SLC52A1Q9NWF4 448 aa12.44□□□□□ -0.42
NSMCE1-207ENST00000564342 TMEM2Q9UHN6 1383 aa12.43□□□□□ -0.42
NSMCE1-207ENST00000564342 LTKP29376 864 aa12.43□□□□□ -0.42
NSMCE1-207ENST00000564342 STRCP1A6NGW2 1772 aa12.43□□□□□ -0.42
NSMCE1-207ENST00000564342 STAG3Q9UJ98 1225 aa12.42□□□□□ -0.42
NSMCE1-207ENST00000564342 TXNDC2Q86VQ3 553 aa12.41□□□□□ -0.42
NSMCE1-207ENST00000564342 CPS1P31327 1500 aa12.41□□□□□ -0.42
NSMCE1-207ENST00000564342 ZFYVE9O95405 1425 aa12.39□□□□□ -0.43
NSMCE1-207ENST00000564342 EID1Q9Y6B2 187 aa12.39□□□□□ -0.43
NSMCE1-207ENST00000564342 TRPM2O94759 1503 aa12.38□□□□□ -0.43
NSMCE1-207ENST00000564342 CLTCL1P53675 1640 aa12.38□□□□□ -0.43
NSMCE1-207ENST00000564342 PIP4P2Q8N4L2 257 aa12.37□□□□□ -0.43
NSMCE1-207ENST00000564342 RIMS2Q9UQ26 1411 aa12.37□□□□□ -0.43
NSMCE1-207ENST00000564342 TRIM52Q96A61 297 aa12.36□□□□□ -0.43
NSMCE1-207ENST00000564342 KIF1BO60333 1816 aa12.36□□□□□ -0.43
NSMCE1-207ENST00000564342 XIRP1Q702N8 1843 aaKnown RBP12.34□□□□□ -0.43
NSMCE1-207ENST00000564342 LRRC7Q96NW7 1537 aa12.34□□□□□ -0.43
NSMCE1-207ENST00000564342 CHGAP10645 457 aaKnown RBP12.34□□□□□ -0.43
NSMCE1-207ENST00000564342 SAMD1Q6SPF0 538 aaPredicted RBP12.34□□□□□ -0.43
NSMCE1-207ENST00000564342 PLEKHG1Q9ULL1 1385 aa12.33□□□□□ -0.44
NSMCE1-207ENST00000564342 AKT1S1Q96B36 256 aa12.33□□□□□ -0.44
NSMCE1-207ENST00000564342 NWD1Q149M9 1564 aa12.32□□□□□ -0.44
NSMCE1-207ENST00000564342 SETD5Q9C0A6 1442 aa12.32□□□□□ -0.44
NSMCE1-207ENST00000564342 SLC4A1APQ9BWU0 796 aaKnown RBP12.32□□□□□ -0.44
NSMCE1-207ENST00000564342 CHD2O14647 1828 aaKnown RBP12.32□□□□□ -0.44
NSMCE1-207ENST00000564342 SLC4A2P04920 1241 aa12.31□□□□□ -0.44
NSMCE1-207ENST00000564342 SLC26A8Q96RN1 970 aa12.31□□□□□ -0.44
NSMCE1-207ENST00000564342 NEXMIFQ5QGS0 1516 aa12.31□□□□□ -0.44
NSMCE1-207ENST00000564342 ALKQ9UM73 1620 aa12.3□□□□□ -0.44
NSMCE1-207ENST00000564342 NRXN3Q9Y4C0 1643 aa12.3□□□□□ -0.44
NSMCE1-207ENST00000564342 HDGFP51858 240 aaKnown RBP12.3□□□□□ -0.44
NSMCE1-207ENST00000564342 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.3□□□□□ -0.44
NSMCE1-207ENST00000564342 DIP2AQ14689 1571 aa12.3□□□□□ -0.44
NSMCE1-207ENST00000564342 ADAMTS13Q76LX8 1427 aa12.29□□□□□ -0.44
NSMCE1-207ENST00000564342 UBAP1LF5GYI3 381 aa12.29□□□□□ -0.44
NSMCE1-207ENST00000564342 PPP1R15AO75807 674 aaPredicted RBP12.29□□□□□ -0.44
NSMCE1-207ENST00000564342 RAB3GAP2Q9H2M9 1393 aa12.29□□□□□ -0.44
NSMCE1-207ENST00000564342 SETBP1Q9Y6X0 1596 aa12.28□□□□□ -0.44
NSMCE1-207ENST00000564342 NUTM2DQ5VT03 806 aaPredicted RBP12.28□□□□□ -0.44
NSMCE1-207ENST00000564342 MPHOSPH9Q99550 1183 aa12.28□□□□□ -0.44
NSMCE1-207ENST00000564342 NKTRP30414 1462 aaKnown RBP12.27□□□□□ -0.44
NSMCE1-207ENST00000564342 KCNA6P17658 529 aa12.27□□□□□ -0.45
NSMCE1-207ENST00000564342 BCANQ96GW7 911 aa12.27□□□□□ -0.45
NSMCE1-207ENST00000564342 ACIN1Q9UKV3 1341 aaKnown RBP12.27□□□□□ -0.45
NSMCE1-207ENST00000564342 PPLO60437 1756 aa12.27□□□□□ -0.45
NSMCE1-207ENST00000564342 TBX22Q9Y458 520 aa12.26□□□□□ -0.45
NSMCE1-207ENST00000564342 ZNF326Q5BKZ1 582 aaKnown RBP12.25□□□□□ -0.45
NSMCE1-207ENST00000564342 IFT172Q9UG01 1749 aa12.25□□□□□ -0.45
NSMCE1-207ENST00000564342 SETD1AO15047 1707 aaKnown RBP12.24□□□□□ -0.45
NSMCE1-207ENST00000564342 TOM1O60784 492 aa12.24□□□□□ -0.45
NSMCE1-207ENST00000564342 PIK3R4Q99570 1358 aa12.24□□□□□ -0.45
NSMCE1-207ENST00000564342 XRN1Q8IZH2 1706 aaKnown RBP12.23□□□□□ -0.45
NSMCE1-207ENST00000564342 CCDC144AA2RUR9 1427 aa12.23□□□□□ -0.45
NSMCE1-207ENST00000564342 TMEM94Q12767 1356 aa12.23□□□□□ -0.45
NSMCE1-207ENST00000564342 PLSCR2Q9NRY7 297 aa12.23□□□□□ -0.45
NSMCE1-207ENST00000564342 SPATA31E1Q6ZUB1 1445 aa12.21□□□□□ -0.45
NSMCE1-207ENST00000564342 PTPRUQ92729 1446 aa12.21□□□□□ -0.45
NSMCE1-207ENST00000564342 PROSER2Q86WR7 435 aaPredicted RBP12.21□□□□□ -0.45
NSMCE1-207ENST00000564342 RPGRIP1LQ68CZ1 1315 aa12.2□□□□□ -0.46
NSMCE1-207ENST00000564342 PIP4K2BP78356 416 aa12.2□□□□□ -0.46
NSMCE1-207ENST00000564342 POLA2Q14181 598 aa12.2□□□□□ -0.46
NSMCE1-207ENST00000564342 RBM33Q96EV2 1170 aaKnown RBP12.2□□□□□ -0.46
NSMCE1-207ENST00000564342 HRCP23327 699 aa12.19□□□□□ -0.46
NSMCE1-207ENST00000564342 METP08581 1390 aa12.18□□□□□ -0.46
NSMCE1-207ENST00000564342 VGFO15240 615 aaPredicted RBP12.18□□□□□ -0.46
NSMCE1-207ENST00000564342 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.17□□□□□ -0.46
NSMCE1-207ENST00000564342 REM2Q8IYK8 340 aaPredicted RBP12.17□□□□□ -0.46
NSMCE1-207ENST00000564342 AMOTL2Q9Y2J4 779 aa12.17□□□□□ -0.46
NSMCE1-207ENST00000564342 NCOA3Q9Y6Q9 1424 aa12.17□□□□□ -0.46
NSMCE1-207ENST00000564342 HSPA1LP34931 641 aa12.16□□□□□ -0.46
NSMCE1-207ENST00000564342 MSH6P52701 1360 aa12.16□□□□□ -0.46
NSMCE1-207ENST00000564342 ROBO1Q9Y6N7 1651 aa12.16□□□□□ -0.46
NSMCE1-207ENST00000564342 RGL3Q3MIN7 710 aa12.15□□□□□ -0.46
NSMCE1-207ENST00000564342 ANKRD30BQ9BXX2 1392 aa12.15□□□□□ -0.46
NSMCE1-207ENST00000564342 FXR2P51116 673 aaKnown RBP eCLIP12.14□□□□□ -0.47
NSMCE1-207ENST00000564342 LHX8Q68G74 356 aa12.14□□□□□ -0.47
NSMCE1-207ENST00000564342 NALCNQ8IZF0 1738 aa12.14□□□□□ -0.47
NSMCE1-207ENST00000564342 ADGRF5Q8IZF2 1346 aa12.13□□□□□ -0.47
NSMCE1-207ENST00000564342 FAM135BQ49AJ0 1406 aa12.13□□□□□ -0.47
NSMCE1-207ENST00000564342 PIK3C2GO75747 1445 aa12.12□□□□□ -0.47
NSMCE1-207ENST00000564342 PRAG1Q86YV5 1406 aa12.12□□□□□ -0.47
NSMCE1-207ENST00000564342 ASXL1Q8IXJ9 1541 aa12.12□□□□□ -0.47
NSMCE1-207ENST00000564342 MYOM2P54296 1465 aa12.12□□□□□ -0.47
NSMCE1-207ENST00000564342 NRXN1Q9ULB1 1477 aa12.11□□□□□ -0.47
NSMCE1-207ENST00000564342 EVX2Q03828 476 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms