RNA–Protein interactions for RNA: ENST00000563995.1

SLX1A-204, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 3

Gene SLX1A, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-204ENST00000563995 IQGAP3Q86VI3 1631 aa29.18■■■□□ 2.26
SLX1A-204ENST00000563995 MYO5BQ9ULV0 1848 aa29.17■■■□□ 2.26
SLX1A-204ENST00000563995 NUP155O75694 1391 aa29.16■■■□□ 2.26
SLX1A-204ENST00000563995 IDI1Q13907 227 aa29.16■■■□□ 2.26
SLX1A-204ENST00000563995 SETD5Q9C0A6 1442 aa29.16■■■□□ 2.26
SLX1A-204ENST00000563995 NWD1Q149M9 1564 aa29.16■■■□□ 2.26
SLX1A-204ENST00000563995 STAG3Q9UJ98 1225 aa29.14■■■□□ 2.26
SLX1A-204ENST00000563995 FAM135BQ49AJ0 1406 aa29.13■■■□□ 2.25
SLX1A-204ENST00000563995 ROBO1Q9Y6N7 1651 aa29.13■■■□□ 2.25
SLX1A-204ENST00000563995 TMEM94Q12767 1356 aa29.12■■■□□ 2.25
SLX1A-204ENST00000563995 NKTRP30414 1462 aaKnown RBP29.09■■■□□ 2.25
SLX1A-204ENST00000563995 KCNA6P17658 529 aa29.08■■■□□ 2.25
SLX1A-204ENST00000563995 RPRD2Q5VT52 1461 aaKnown RBP29.08■■■□□ 2.25
SLX1A-204ENST00000563995 CHD2O14647 1828 aaKnown RBP29.06■■■□□ 2.24
SLX1A-204ENST00000563995 RAB3GAP2Q9H2M9 1393 aa29.06■■■□□ 2.24
SLX1A-204ENST00000563995 TRIM26Q12899 539 aaPredicted RBP29.06■■■□□ 2.24
SLX1A-204ENST00000563995 TRIM52Q96A61 297 aa29.05■■■□□ 2.24
SLX1A-204ENST00000563995 SLC26A8Q96RN1 970 aa29.05■■■□□ 2.24
SLX1A-204ENST00000563995 ZFYVE9O95405 1425 aa29.03■■■□□ 2.24
SLX1A-204ENST00000563995 E9PCH4 1651 aa29.02■■■□□ 2.24
SLX1A-204ENST00000563995 TMEM131LA2VDJ0 1609 aa29.02■■■□□ 2.24
SLX1A-204ENST00000563995 ACIN1Q9UKV3 1341 aaKnown RBP29.02■■■□□ 2.24
SLX1A-204ENST00000563995 UPF1Q92900 1129 aaKnown RBP eCLIP29.02■■■□□ 2.24
SLX1A-204ENST00000563995 SLC52A1Q9NWF4 448 aa29.02■■■□□ 2.24
SLX1A-204ENST00000563995 PROSER2Q86WR7 435 aaPredicted RBP28.99■■■□□ 2.23
SLX1A-204ENST00000563995 RBM33Q96EV2 1170 aaKnown RBP28.98■■■□□ 2.23
SLX1A-204ENST00000563995 PHLPP1O60346 1717 aa28.96■■■□□ 2.23
SLX1A-204ENST00000563995 HRCP23327 699 aa28.95■■■□□ 2.22
SLX1A-204ENST00000563995 PLEKHG1Q9ULL1 1385 aa28.95■■■□□ 2.22
SLX1A-204ENST00000563995 SLC4A1APQ9BWU0 796 aaKnown RBP28.93■■■□□ 2.22
SLX1A-204ENST00000563995 MSH6P52701 1360 aa28.92■■■□□ 2.22
SLX1A-204ENST00000563995 RIMS2Q9UQ26 1411 aa28.92■■■□□ 2.22
SLX1A-204ENST00000563995 MPHOSPH9Q99550 1183 aa28.87■■■□□ 2.21
SLX1A-204ENST00000563995 COL16A1Q07092 1604 aaPredicted RBP28.87■■■□□ 2.21
SLX1A-204ENST00000563995 SPHKAPQ2M3C7 1700 aa28.86■■■□□ 2.21
SLX1A-204ENST00000563995 BCANQ96GW7 911 aa28.86■■■□□ 2.21
SLX1A-204ENST00000563995 DIP2AQ14689 1571 aa28.85■■■□□ 2.21
SLX1A-204ENST00000563995 JCADQ9P266 1359 aa28.84■■■□□ 2.21
SLX1A-204ENST00000563995 SLAIN2Q9P270 581 aa28.83■■■□□ 2.21
SLX1A-204ENST00000563995 ADAMTS13Q76LX8 1427 aa28.83■■■□□ 2.21
SLX1A-204ENST00000563995 NCOA3Q9Y6Q9 1424 aa28.83■■■□□ 2.21
SLX1A-204ENST00000563995 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.83■■■□□ 2.21
SLX1A-204ENST00000563995 PPP1R15AO75807 674 aaPredicted RBP28.81■■■□□ 2.2
SLX1A-204ENST00000563995 TRPM2O94759 1503 aa28.8■■■□□ 2.2
SLX1A-204ENST00000563995 HDGFP51858 240 aaKnown RBP28.8■■■□□ 2.2
SLX1A-204ENST00000563995 TBX22Q9Y458 520 aa28.8■■■□□ 2.2
SLX1A-204ENST00000563995 ZNF772Q68DY9 489 aaPredicted RBP28.79■■■□□ 2.2
SLX1A-204ENST00000563995 FOXD1Q16676 465 aa28.77■■■□□ 2.2
SLX1A-204ENST00000563995 AHDC1Q5TGY3 1603 aaPredicted RBP28.76■■■□□ 2.19
SLX1A-204ENST00000563995 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.75■■■□□ 2.19
SLX1A-204ENST00000563995 PIK3R4Q99570 1358 aa28.75■■■□□ 2.19
SLX1A-204ENST00000563995 SHPRHQ149N8 1683 aa28.74■■■□□ 2.19
SLX1A-204ENST00000563995 MEX3CQ5U5Q3 659 aaKnown RBP28.73■■■□□ 2.19
SLX1A-204ENST00000563995 CLTCL1P53675 1640 aa28.72■■■□□ 2.19
SLX1A-204ENST00000563995 NRXN3Q9Y4C0 1643 aa28.72■■■□□ 2.19
SLX1A-204ENST00000563995 CHGAP10645 457 aaKnown RBP28.72■■■□□ 2.19
SLX1A-204ENST00000563995 LRP6O75581 1613 aa28.71■■■□□ 2.19
SLX1A-204ENST00000563995 NUTM2DQ5VT03 806 aaPredicted RBP28.7■■■□□ 2.18
SLX1A-204ENST00000563995 XRN1Q8IZH2 1706 aaKnown RBP28.69■■■□□ 2.18
SLX1A-204ENST00000563995 SPATA31A6Q5VVP1 1343 aa28.69■■■□□ 2.18
SLX1A-204ENST00000563995 RXRBP28702 533 aa28.68■■■□□ 2.18
SLX1A-204ENST00000563995 PTPRUQ92729 1446 aa28.68■■■□□ 2.18
SLX1A-204ENST00000563995 SETBP1Q9Y6X0 1596 aa28.66■■■□□ 2.18
SLX1A-204ENST00000563995 PCGF6Q9BYE7 350 aa28.65■■■□□ 2.18
SLX1A-204ENST00000563995 CADPS2Q86UW7 1296 aa28.64■■■□□ 2.18
SLX1A-204ENST00000563995 C19orf44Q9H6X5 657 aa28.64■■■□□ 2.18
SLX1A-204ENST00000563995 CCDC144AA2RUR9 1427 aa28.63■■■□□ 2.17
SLX1A-204ENST00000563995 C14orf37Q86TY3 774 aa28.63■■■□□ 2.17
SLX1A-204ENST00000563995 CDK12Q9NYV4 1490 aaPredicted RBP28.63■■■□□ 2.17
SLX1A-204ENST00000563995 KIF1BO60333 1816 aa28.61■■■□□ 2.17
SLX1A-204ENST00000563995 ANKRD30BQ9BXX2 1392 aa28.61■■■□□ 2.17
SLX1A-204ENST00000563995 DCCP43146 1447 aa28.6■■■□□ 2.17
SLX1A-204ENST00000563995 NHSL1Q5SYE7 1610 aa28.59■■■□□ 2.17
SLX1A-204ENST00000563995 ATF3P18847 181 aa28.59■■■□□ 2.17
SLX1A-204ENST00000563995 AMOTL2Q9Y2J4 779 aa28.59■■■□□ 2.17
SLX1A-204ENST00000563995 ASXL1Q8IXJ9 1541 aa28.56■■■□□ 2.16
SLX1A-204ENST00000563995 SRCAPQ6ZRS2 3230 aa28.55■■■□□ 2.16
SLX1A-204ENST00000563995 BRINP3Q76B58 766 aa28.54■■■□□ 2.16
SLX1A-204ENST00000563995 DHX57Q6P158 1386 aaKnown RBP28.53■■■□□ 2.16
SLX1A-204ENST00000563995 MST1RQ04912 1400 aa28.52■■■□□ 2.16
SLX1A-204ENST00000563995 NALCNQ8IZF0 1738 aa28.52■■■□□ 2.16
SLX1A-204ENST00000563995 NEXMIFQ5QGS0 1516 aa28.52■■■□□ 2.16
SLX1A-204ENST00000563995 ZNF326Q5BKZ1 582 aaKnown RBP28.51■■■□□ 2.15
SLX1A-204ENST00000563995 SPATA31E1Q6ZUB1 1445 aa28.5■■■□□ 2.15
SLX1A-204ENST00000563995 METP08581 1390 aa28.49■■■□□ 2.15
SLX1A-204ENST00000563995 ADGRL3Q9HAR2 1447 aa28.44■■■□□ 2.14
SLX1A-204ENST00000563995 AFF2P51816 1311 aa28.43■■■□□ 2.14
SLX1A-204ENST00000563995 RPGRIP1LQ68CZ1 1315 aa28.43■■■□□ 2.14
SLX1A-204ENST00000563995 RGS12O14924 1447 aa28.43■■■□□ 2.14
SLX1A-204ENST00000563995 NUTM2BA6NNL0 878 aaPredicted RBP28.43■■■□□ 2.14
SLX1A-204ENST00000563995 NUTM2EB1AL46 878 aaPredicted RBP28.43■■■□□ 2.14
SLX1A-204ENST00000563995 NUTM2AQ8IVF1 878 aaPredicted RBP28.43■■■□□ 2.14
SLX1A-204ENST00000563995 RGL3Q3MIN7 710 aa28.41■■■□□ 2.14
SLX1A-204ENST00000563995 LAMC1P11047 1609 aa28.4■■■□□ 2.14
SLX1A-204ENST00000563995 PPLO60437 1756 aa28.4■■■□□ 2.14
SLX1A-204ENST00000563995 ZRANB1Q9UGI0 708 aa28.39■■■□□ 2.14
SLX1A-204ENST00000563995 RBM6P78332 1123 aaKnown RBP28.37■■■□□ 2.13
SLX1A-204ENST00000563995 IFT172Q9UG01 1749 aa28.37■■■□□ 2.13
SLX1A-204ENST00000563995 VGFO15240 615 aaPredicted RBP28.35■■■□□ 2.13
SLX1A-204ENST00000563995 PNPLA6Q8IY17 1366 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms