RNA–Protein interactions for RNA: ENST00000563888.6

TCF4-221, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-221ENST00000563888 UPF1Q92900 1129 aaKnown RBP eCLIP12.1□□□□□ -0.47
TCF4-221ENST00000563888 MYO5CQ9NQX4 1742 aa12.09□□□□□ -0.47
TCF4-221ENST00000563888 FBXO31Q5XUX0 539 aaPredicted RBP12.09□□□□□ -0.47
TCF4-221ENST00000563888 A2ML1A8K2U0 1454 aa12.08□□□□□ -0.47
TCF4-221ENST00000563888 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.08□□□□□ -0.48
TCF4-221ENST00000563888 SUPT6HQ7KZ85 1726 aaKnown RBP12.08□□□□□ -0.48
TCF4-221ENST00000563888 SPAG9O60271 1321 aaKnown RBP12.08□□□□□ -0.48
TCF4-221ENST00000563888 KIF14Q15058 1648 aa12.07□□□□□ -0.48
TCF4-221ENST00000563888 HNRNPMP52272 730 aaKnown RBP eCLIP12.06□□□□□ -0.487e-6■■■□□ 17
TCF4-221ENST00000563888 THEMISQ8N1K5 641 aaPredicted RBP12.06□□□□□ -0.48
TCF4-221ENST00000563888 MS4A3Q96HJ5 214 aa12.06□□□□□ -0.48
TCF4-221ENST00000563888 MROH2AA6NES4 1674 aa12.06□□□□□ -0.48
TCF4-221ENST00000563888 ZNF142P52746 1687 aaPredicted RBP12.06□□□□□ -0.48
TCF4-221ENST00000563888 VWDEQ8N2E2 1590 aa12.05□□□□□ -0.48
TCF4-221ENST00000563888 NBR1Q14596 966 aa12.05□□□□□ -0.48
TCF4-221ENST00000563888 TRIM52Q96A61 297 aa12.05□□□□□ -0.48
TCF4-221ENST00000563888 CABP2Q9NPB3 220 aa12.05□□□□□ -0.48
TCF4-221ENST00000563888 CLTCQ00610 1675 aaKnown RBP12.05□□□□□ -0.48
TCF4-221ENST00000563888 DNMT1P26358 1616 aaKnown RBP12.04□□□□□ -0.48
TCF4-221ENST00000563888 NPHP4O75161 1426 aaPredicted RBP12.04□□□□□ -0.48
TCF4-221ENST00000563888 CLIP1P30622 1438 aa12.04□□□□□ -0.48
TCF4-221ENST00000563888 TROQ12816 1431 aaPredicted RBP12.04□□□□□ -0.48
TCF4-221ENST00000563888 LRRC7Q96NW7 1537 aa12.04□□□□□ -0.48
TCF4-221ENST00000563888 NEURL4Q96JN8 1562 aa12.04□□□□□ -0.48
TCF4-221ENST00000563888 TNRQ92752 1358 aa12.04□□□□□ -0.48
TCF4-221ENST00000563888 SETD1AO15047 1707 aaKnown RBP12.03□□□□□ -0.48
TCF4-221ENST00000563888 KIDINS220Q9ULH0 1771 aa12.02□□□□□ -0.48
TCF4-221ENST00000563888 GOLGA2Q08379 1002 aa12.02□□□□□ -0.49
TCF4-221ENST00000563888 EFCAB3Q8N7B9 438 aa12.02□□□□□ -0.49
TCF4-221ENST00000563888 ABCC1P33527 1531 aa12.01□□□□□ -0.49
TCF4-221ENST00000563888 SOX12O15370 315 aa12.01□□□□□ -0.49
TCF4-221ENST00000563888 NLRP6P59044 892 aa12.01□□□□□ -0.49
TCF4-221ENST00000563888 LHX8Q68G74 356 aa12□□□□□ -0.49
TCF4-221ENST00000563888 MFRPQ9BY79 579 aa12□□□□□ -0.49
TCF4-221ENST00000563888 WDR70Q9NW82 654 aa11.99□□□□□ -0.49
TCF4-221ENST00000563888 A2MP01023 1474 aa11.99□□□□□ -0.49
TCF4-221ENST00000563888 SAMD9LQ8IVG5 1584 aa11.97□□□□□ -0.49
TCF4-221ENST00000563888 RNF17Q9BXT8 1623 aaKnown RBP11.97□□□□□ -0.49
TCF4-221ENST00000563888 FAM135BQ49AJ0 1406 aa11.96□□□□□ -0.49
TCF4-221ENST00000563888 FMN1Q68DA7 1419 aa11.96□□□□□ -0.49
TCF4-221ENST00000563888 MEX3CQ5U5Q3 659 aaKnown RBP11.96□□□□□ -0.49
TCF4-221ENST00000563888 POLR1AO95602 1720 aaPredicted RBP11.96□□□□□ -0.49
TCF4-221ENST00000563888 CDC42BPBQ9Y5S2 1711 aa11.96□□□□□ -0.49
TCF4-221ENST00000563888 ITSN2Q9NZM3 1697 aa11.96□□□□□ -0.5
TCF4-221ENST00000563888 MED14O60244 1454 aa11.95□□□□□ -0.5
TCF4-221ENST00000563888 WASHC2CQ9Y4E1 1318 aa11.95□□□□□ -0.5
TCF4-221ENST00000563888 ASTLQ6HA08 431 aaPredicted RBP11.95□□□□□ -0.5
TCF4-221ENST00000563888 TMEM106CQ9BVX2 250 aa11.95□□□□□ -0.5
TCF4-221ENST00000563888 FAM135AQ9P2D6 1515 aa11.95□□□□□ -0.5
TCF4-221ENST00000563888 KIF3BO15066 747 aa11.94□□□□□ -0.5
TCF4-221ENST00000563888 RBM33Q96EV2 1170 aaKnown RBP11.94□□□□□ -0.5
TCF4-221ENST00000563888 PHF8Q9UPP1 1060 aa11.94□□□□□ -0.5
TCF4-221ENST00000563888 MIA2Q96PC5 1412 aa11.94□□□□□ -0.5
TCF4-221ENST00000563888 UBTFP17480 764 aaKnown RBP11.93□□□□□ -0.5
TCF4-221ENST00000563888 RXRBP28702 533 aa11.93□□□□□ -0.5
TCF4-221ENST00000563888 ZNF772Q68DY9 489 aaPredicted RBP11.93□□□□□ -0.5
TCF4-221ENST00000563888 ATP7AQ04656 1500 aa11.92□□□□□ -0.5
TCF4-221ENST00000563888 SYCP2Q9BX26 1530 aa11.92□□□□□ -0.5
TCF4-221ENST00000563888 ATMINO43313 823 aaPredicted RBP11.92□□□□□ -0.5
TCF4-221ENST00000563888 STRCP1A6NGW2 1772 aa11.92□□□□□ -0.5
TCF4-221ENST00000563888 UGGT1Q9NYU2 1555 aa11.92□□□□□ -0.5
TCF4-221ENST00000563888 PREX2Q70Z35 1606 aa11.91□□□□□ -0.5
TCF4-221ENST00000563888 MKRN3Q13064 507 aaKnown RBP11.91□□□□□ -0.5
TCF4-221ENST00000563888 CFDP1Q9UEE9 299 aaPredicted RBP11.91□□□□□ -0.5
TCF4-221ENST00000563888 PLXNC1O60486 1568 aa11.9□□□□□ -0.5
TCF4-221ENST00000563888 TIE1P35590 1138 aa11.9□□□□□ -0.5
TCF4-221ENST00000563888 TXNDC2Q86VQ3 553 aa11.89□□□□□ -0.51
TCF4-221ENST00000563888 FBXO22Q8NEZ5 403 aa11.89□□□□□ -0.51
TCF4-221ENST00000563888 IQGAP1P46940 1657 aa11.89□□□□□ -0.51
TCF4-221ENST00000563888 JCADQ9P266 1359 aa11.89□□□□□ -0.51
TCF4-221ENST00000563888 PZPP20742 1482 aa11.89□□□□□ -0.51
TCF4-221ENST00000563888 NLRP1Q9C000 1473 aa11.89□□□□□ -0.51
TCF4-221ENST00000563888 SYNMO15061 1565 aa11.88□□□□□ -0.51
TCF4-221ENST00000563888 PRKCSHP14314 528 aaPredicted RBP11.88□□□□□ -0.51
TCF4-221ENST00000563888 LTKP29376 864 aa11.88□□□□□ -0.51
TCF4-221ENST00000563888 TPRNQ4KMQ1 711 aa11.88□□□□□ -0.51
TCF4-221ENST00000563888 PROSER2Q86WR7 435 aaPredicted RBP11.88□□□□□ -0.51
TCF4-221ENST00000563888 DEPDC5O75140 1603 aa11.88□□□□□ -0.51
TCF4-221ENST00000563888 TMEM94Q12767 1356 aa11.88□□□□□ -0.51
TCF4-221ENST00000563888 PPP1R37O75864 691 aa11.87□□□□□ -0.51
TCF4-221ENST00000563888 CADPS2Q86UW7 1296 aa11.87□□□□□ -0.51
TCF4-221ENST00000563888 PELP1Q8IZL8 1130 aaKnown RBP11.87□□□□□ -0.51
TCF4-221ENST00000563888 SLC39A7Q92504 469 aa11.87□□□□□ -0.51
TCF4-221ENST00000563888 SLAIN2Q9P270 581 aa11.86□□□□□ -0.51
TCF4-221ENST00000563888 DHX29Q7Z478 1369 aaKnown RBP11.86□□□□□ -0.51
TCF4-221ENST00000563888 ZNF644Q9H582 1327 aaPredicted RBP11.86□□□□□ -0.51
TCF4-221ENST00000563888 NUTM2BA6NNL0 878 aaPredicted RBP11.85□□□□□ -0.51
TCF4-221ENST00000563888 NUTM2EB1AL46 878 aaPredicted RBP11.85□□□□□ -0.51
TCF4-221ENST00000563888 C7P10643 843 aa11.85□□□□□ -0.51
TCF4-221ENST00000563888 NUTM2DQ5VT03 806 aaPredicted RBP11.85□□□□□ -0.51
TCF4-221ENST00000563888 NUTM2AQ8IVF1 878 aaPredicted RBP11.85□□□□□ -0.51
TCF4-221ENST00000563888 BMP2KQ9NSY1 1161 aaPredicted RBP11.85□□□□□ -0.51
TCF4-221ENST00000563888 GPATCH8Q9UKJ3 1502 aaKnown RBP11.85□□□□□ -0.51
TCF4-221ENST00000563888 KIAA1107Q9UPP5 1409 aa11.85□□□□□ -0.51
TCF4-221ENST00000563888 ARHGAP35Q9NRY4 1499 aa11.84□□□□□ -0.51
TCF4-221ENST00000563888 ATN1P54259 1190 aaPredicted RBP11.84□□□□□ -0.51
TCF4-221ENST00000563888 TRPC6Q9Y210 931 aa11.84□□□□□ -0.51
TCF4-221ENST00000563888 INO80Q9ULG1 1556 aaPredicted RBP11.84□□□□□ -0.51
TCF4-221ENST00000563888 EID1Q9Y6B2 187 aa11.83□□□□□ -0.52
TCF4-221ENST00000563888 ROBO1Q9Y6N7 1651 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms