RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 RGS17Q9UGC6 210 aaPredicted RBP28.12■■■□□ 2.09
SYNGR3-203ENST00000563869 TET3O43151 1660 aa28.09■■■□□ 2.09
SYNGR3-203ENST00000563869 TMEM94Q12767 1356 aa28.09■■■□□ 2.09
SYNGR3-203ENST00000563869 IQGAP3Q86VI3 1631 aa28.08■■■□□ 2.09
SYNGR3-203ENST00000563869 IDI1Q13907 227 aa28.08■■■□□ 2.09
SYNGR3-203ENST00000563869 KCNA6P17658 529 aa28.07■■■□□ 2.08
SYNGR3-203ENST00000563869 ROBO1Q9Y6N7 1651 aa28.05■■■□□ 2.08
SYNGR3-203ENST00000563869 NOS1P29475 1434 aa28.03■■■□□ 2.08
SYNGR3-203ENST00000563869 ADGRB3O60242 1522 aa28.02■■■□□ 2.08
SYNGR3-203ENST00000563869 NWD1Q149M9 1564 aa28.02■■■□□ 2.08
SYNGR3-203ENST00000563869 NUP155O75694 1391 aa28.01■■■□□ 2.07
SYNGR3-203ENST00000563869 PROSER2Q86WR7 435 aaPredicted RBP28.01■■■□□ 2.07
SYNGR3-203ENST00000563869 SLC26A8Q96RN1 970 aa28.01■■■□□ 2.07
SYNGR3-203ENST00000563869 NKTRP30414 1462 aaKnown RBP28■■■□□ 2.07
SYNGR3-203ENST00000563869 RPRD2Q5VT52 1461 aaKnown RBP28■■■□□ 2.07
SYNGR3-203ENST00000563869 RAB3GAP2Q9H2M9 1393 aa27.99■■■□□ 2.07
SYNGR3-203ENST00000563869 TRIM52Q96A61 297 aa27.96■■■□□ 2.07
SYNGR3-203ENST00000563869 SLC52A1Q9NWF4 448 aa27.96■■■□□ 2.07
SYNGR3-203ENST00000563869 RBM33Q96EV2 1170 aaKnown RBP27.95■■■□□ 2.06
SYNGR3-203ENST00000563869 POTEAQ6S8J7 498 aa27.94■■■□□ 2.06
SYNGR3-203ENST00000563869 MSH6P52701 1360 aa27.91■■■□□ 2.06
SYNGR3-203ENST00000563869 CHD2O14647 1828 aaKnown RBP27.91■■■□□ 2.06
SYNGR3-203ENST00000563869 MYO5BQ9ULV0 1848 aa27.9■■■□□ 2.06
SYNGR3-203ENST00000563869 PHLPP1O60346 1717 aa27.89■■■□□ 2.06
SYNGR3-203ENST00000563869 BCANQ96GW7 911 aa27.89■■■□□ 2.06
SYNGR3-203ENST00000563869 ZFYVE9O95405 1425 aa27.88■■■□□ 2.05
SYNGR3-203ENST00000563869 PLEKHG1Q9ULL1 1385 aa27.86■■■□□ 2.05
SYNGR3-203ENST00000563869 SLAIN2Q9P270 581 aa27.86■■■□□ 2.05
SYNGR3-203ENST00000563869 E9PCH4 1651 aa27.85■■■□□ 2.05
SYNGR3-203ENST00000563869 SLC4A1APQ9BWU0 796 aaKnown RBP27.85■■■□□ 2.05
SYNGR3-203ENST00000563869 TMEM131LA2VDJ0 1609 aa27.84■■■□□ 2.05
SYNGR3-203ENST00000563869 JCADQ9P266 1359 aa27.83■■■□□ 2.05
SYNGR3-203ENST00000563869 HDGFP51858 240 aaKnown RBP27.82■■■□□ 2.04
SYNGR3-203ENST00000563869 RIMS2Q9UQ26 1411 aa27.82■■■□□ 2.04
SYNGR3-203ENST00000563869 PCGF6Q9BYE7 350 aa27.8■■■□□ 2.04
SYNGR3-203ENST00000563869 SPHKAPQ2M3C7 1700 aa27.79■■■□□ 2.04
SYNGR3-203ENST00000563869 NCOA3Q9Y6Q9 1424 aa27.79■■■□□ 2.04
SYNGR3-203ENST00000563869 PPP1R15AO75807 674 aaPredicted RBP27.79■■■□□ 2.04
SYNGR3-203ENST00000563869 COL16A1Q07092 1604 aaPredicted RBP27.78■■■□□ 2.04
SYNGR3-203ENST00000563869 MPHOSPH9Q99550 1183 aa27.78■■■□□ 2.04
SYNGR3-203ENST00000563869 TBX22Q9Y458 520 aa27.78■■■□□ 2.04
SYNGR3-203ENST00000563869 SETD1AO15047 1707 aaKnown RBP27.76■■■□□ 2.03
SYNGR3-203ENST00000563869 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.73■■■□□ 2.03
SYNGR3-203ENST00000563869 DIP2AQ14689 1571 aa27.73■■■□□ 2.03
SYNGR3-203ENST00000563869 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.71■■■□□ 2.03
SYNGR3-203ENST00000563869 ADAMTS13Q76LX8 1427 aa27.7■■■□□ 2.03
SYNGR3-203ENST00000563869 TRPM2O94759 1503 aa27.7■■■□□ 2.02
SYNGR3-203ENST00000563869 PIK3R4Q99570 1358 aa27.69■■■□□ 2.02
SYNGR3-203ENST00000563869 SPATA31A6Q5VVP1 1343 aa27.68■■■□□ 2.02
SYNGR3-203ENST00000563869 AHDC1Q5TGY3 1603 aaPredicted RBP27.68■■■□□ 2.02
SYNGR3-203ENST00000563869 CHGAP10645 457 aaKnown RBP27.68■■■□□ 2.02
SYNGR3-203ENST00000563869 C14orf37Q86TY3 774 aa27.68■■■□□ 2.02
SYNGR3-203ENST00000563869 LRP6O75581 1613 aa27.67■■■□□ 2.02
SYNGR3-203ENST00000563869 CADPS2Q86UW7 1296 aa27.67■■■□□ 2.02
SYNGR3-203ENST00000563869 SHPRHQ149N8 1683 aa27.66■■■□□ 2.02
SYNGR3-203ENST00000563869 C19orf44Q9H6X5 657 aa27.66■■■□□ 2.02
SYNGR3-203ENST00000563869 KIF1BO60333 1816 aa27.64■■■□□ 2.02
SYNGR3-203ENST00000563869 ATF3P18847 181 aa27.63■■■□□ 2.01
SYNGR3-203ENST00000563869 NUTM2DQ5VT03 806 aaPredicted RBP27.63■■■□□ 2.01
SYNGR3-203ENST00000563869 ZNF772Q68DY9 489 aaPredicted RBP27.61■■■□□ 2.01
SYNGR3-203ENST00000563869 CCDC144AA2RUR9 1427 aa27.6■■■□□ 2.01
SYNGR3-203ENST00000563869 MEX3CQ5U5Q3 659 aaKnown RBP27.6■■■□□ 2.01
SYNGR3-203ENST00000563869 AMOTL2Q9Y2J4 779 aa27.57■■■□□ 2
SYNGR3-203ENST00000563869 PTPRUQ92729 1446 aa27.56■■■□□ 2
SYNGR3-203ENST00000563869 DCCP43146 1447 aa27.54■■■□□ 2
SYNGR3-203ENST00000563869 BRINP3Q76B58 766 aa27.54■■■□□ 2
SYNGR3-203ENST00000563869 XRN1Q8IZH2 1706 aaKnown RBP27.53■■■□□ 2
SYNGR3-203ENST00000563869 CLTCL1P53675 1640 aa27.52■■■□□ 2
SYNGR3-203ENST00000563869 CLSPNQ9HAW4 1339 aa27.52■■■□□ 2
SYNGR3-203ENST00000563869 UPF1Q92900 1129 aaKnown RBP eCLIP27.52■■■□□ 2
SYNGR3-203ENST00000563869 NRXN3Q9Y4C0 1643 aa27.52■■■□□ 2
SYNGR3-203ENST00000563869 DHX57Q6P158 1386 aaKnown RBP27.51■■□□□ 1.99
SYNGR3-203ENST00000563869 ANKRD30BQ9BXX2 1392 aa27.51■■□□□ 1.99
SYNGR3-203ENST00000563869 SETBP1Q9Y6X0 1596 aa27.5■■□□□ 1.99
SYNGR3-203ENST00000563869 NHSL1Q5SYE7 1610 aa27.49■■□□□ 1.99
SYNGR3-203ENST00000563869 ASXL1Q8IXJ9 1541 aa27.48■■□□□ 1.99
SYNGR3-203ENST00000563869 RXRBP28702 533 aa27.47■■□□□ 1.99
SYNGR3-203ENST00000563869 CDK12Q9NYV4 1490 aaPredicted RBP27.46■■□□□ 1.99
SYNGR3-203ENST00000563869 FOXD1Q16676 465 aa27.46■■□□□ 1.99
SYNGR3-203ENST00000563869 MST1RQ04912 1400 aa27.45■■□□□ 1.98
SYNGR3-203ENST00000563869 NUTM2BA6NNL0 878 aaPredicted RBP27.44■■□□□ 1.98
SYNGR3-203ENST00000563869 NUTM2EB1AL46 878 aaPredicted RBP27.44■■□□□ 1.98
SYNGR3-203ENST00000563869 NUTM2AQ8IVF1 878 aaPredicted RBP27.44■■□□□ 1.98
SYNGR3-203ENST00000563869 RPGRIP1LQ68CZ1 1315 aa27.42■■□□□ 1.98
SYNGR3-203ENST00000563869 STAC3Q96MF2 364 aa27.42■■□□□ 1.98
SYNGR3-203ENST00000563869 AFF2P51816 1311 aa27.4■■□□□ 1.98
SYNGR3-203ENST00000563869 METP08581 1390 aa27.39■■□□□ 1.98
SYNGR3-203ENST00000563869 LRRC59Q96AG4 307 aaKnown RBP27.39■■□□□ 1.98
SYNGR3-203ENST00000563869 ZNF326Q5BKZ1 582 aaKnown RBP27.37■■□□□ 1.97
SYNGR3-203ENST00000563869 ADGRL3Q9HAR2 1447 aa27.37■■□□□ 1.97
SYNGR3-203ENST00000563869 NALCNQ8IZF0 1738 aa27.36■■□□□ 1.97
SYNGR3-203ENST00000563869 SPATA31E1Q6ZUB1 1445 aa27.34■■□□□ 1.97
SYNGR3-203ENST00000563869 NEXMIFQ5QGS0 1516 aa27.33■■□□□ 1.97
SYNGR3-203ENST00000563869 PPLO60437 1756 aa27.32■■□□□ 1.96
SYNGR3-203ENST00000563869 PNPLA6Q8IY17 1366 aa27.32■■□□□ 1.96
SYNGR3-203ENST00000563869 VGFO15240 615 aaPredicted RBP27.31■■□□□ 1.96
SYNGR3-203ENST00000563869 CCER1Q8TC90 406 aaPredicted RBP27.31■■□□□ 1.96
SYNGR3-203ENST00000563869 IFT172Q9UG01 1749 aa27.3■■□□□ 1.96
SYNGR3-203ENST00000563869 DDX17Q92841 729 aaKnown RBP27.29■■□□□ 1.96
SYNGR3-203ENST00000563869 C8orf37Q96NL8 207 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms