RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 KNSTRNQ9Y448 316 aa15.61■□□□□ 0.09
SCAMP2-204ENST00000563829 PDE3AQ14432 1141 aa15.6■□□□□ 0.09
SCAMP2-204ENST00000563829 TRMT2AQ8IZ69 625 aaKnown RBP15.6■□□□□ 0.09
SCAMP2-204ENST00000563829 PCDHB15Q9Y5E8 787 aa15.6■□□□□ 0.09
SCAMP2-204ENST00000563829 OFD1O75665 1012 aa15.59■□□□□ 0.09
SCAMP2-204ENST00000563829 ZSCAN30Q86W11 494 aa15.59■□□□□ 0.09
SCAMP2-204ENST00000563829 CAMSAP2Q08AD1 1489 aa15.59■□□□□ 0.09
SCAMP2-204ENST00000563829 ARHGEF12Q9NZN5 1544 aa15.59■□□□□ 0.09
SCAMP2-204ENST00000563829 PMFBP1Q8TBY8 1022 aa15.59■□□□□ 0.09
SCAMP2-204ENST00000563829 TESK2Q96S53 571 aa15.59■□□□□ 0.09
SCAMP2-204ENST00000563829 TMF1P82094 1093 aa15.58■□□□□ 0.08
SCAMP2-204ENST00000563829 AAMPQ13685 434 aa15.58■□□□□ 0.08
SCAMP2-204ENST00000563829 ANP32BQ92688 251 aaKnown RBP15.58■□□□□ 0.08
SCAMP2-204ENST00000563829 TNPO1Q92973 898 aaKnown RBP15.58■□□□□ 0.08
SCAMP2-204ENST00000563829 E9PSI1 815 aa15.58■□□□□ 0.08
SCAMP2-204ENST00000563829 KIF21AQ7Z4S6 1674 aa15.57■□□□□ 0.08
SCAMP2-204ENST00000563829 NASPP49321 788 aaPredicted RBP15.57■□□□□ 0.08
SCAMP2-204ENST00000563829 ANKRD50Q9ULJ7 1429 aa15.57■□□□□ 0.08
SCAMP2-204ENST00000563829 TOPBP1Q92547 1522 aa15.57■□□□□ 0.08
SCAMP2-204ENST00000563829 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.57■□□□□ 0.08
SCAMP2-204ENST00000563829 GAPVD1Q14C86 1478 aa15.57■□□□□ 0.08
SCAMP2-204ENST00000563829 CCDC173Q0VFZ6 552 aa15.57■□□□□ 0.08
SCAMP2-204ENST00000563829 PRDM10Q9NQV6 1147 aa15.57■□□□□ 0.08
SCAMP2-204ENST00000563829 FOXD4L1Q9NU39 408 aa15.57■□□□□ 0.08
SCAMP2-204ENST00000563829 TNNQ9UQP3 1299 aa15.57■□□□□ 0.08
SCAMP2-204ENST00000563829 ZHX1Q9UKY1 873 aaPredicted RBP15.56■□□□□ 0.08
SCAMP2-204ENST00000563829 BCL2L13Q9BXK5 485 aa15.56■□□□□ 0.08
SCAMP2-204ENST00000563829 ZNF692Q9BU19 519 aaPredicted RBP15.55■□□□□ 0.08
SCAMP2-204ENST00000563829 DNMBPQ6XZF7 1577 aa15.55■□□□□ 0.08
SCAMP2-204ENST00000563829 COL17A1Q9UMD9 1497 aaPredicted RBP15.55■□□□□ 0.08
SCAMP2-204ENST00000563829 ANKRD30AQ9BXX3 1397 aa15.55■□□□□ 0.08
SCAMP2-204ENST00000563829 GBP4Q96PP9 640 aa15.55■□□□□ 0.08
SCAMP2-204ENST00000563829 RLBP1P12271 317 aa15.53■□□□□ 0.08
SCAMP2-204ENST00000563829 NEUROD2Q15784 382 aa15.53■□□□□ 0.08
SCAMP2-204ENST00000563829 ERBINQ96RT1 1412 aa15.53■□□□□ 0.08
SCAMP2-204ENST00000563829 MAP7D2Q96T17 732 aa15.52■□□□□ 0.08
SCAMP2-204ENST00000563829 RWDD1Q9H446 243 aaPredicted RBP15.52■□□□□ 0.08
SCAMP2-204ENST00000563829 UQCRHLA0A096LP55 91 aa15.52■□□□□ 0.08
SCAMP2-204ENST00000563829 UQCRHP07919 91 aa15.52■□□□□ 0.08
SCAMP2-204ENST00000563829 HSP90AB1P08238 724 aaKnown RBP15.52■□□□□ 0.08
SCAMP2-204ENST00000563829 XPCQ01831 940 aaPredicted RBP15.52■□□□□ 0.07
SCAMP2-204ENST00000563829 PRAG1Q86YV5 1406 aa15.51■□□□□ 0.07
SCAMP2-204ENST00000563829 SKOR2Q2VWA4 1001 aaPredicted RBP15.51■□□□□ 0.07
SCAMP2-204ENST00000563829 PPP1R9BQ96SB3 815 aa15.51■□□□□ 0.07
SCAMP2-204ENST00000563829 AMER1Q5JTC6 1135 aaPredicted RBP15.49■□□□□ 0.07
SCAMP2-204ENST00000563829 WDR62O43379 1518 aa15.49■□□□□ 0.07
SCAMP2-204ENST00000563829 RTEL1-TNFRSF6BF6WH68 1400 aa15.49■□□□□ 0.07
SCAMP2-204ENST00000563829 FGD1P98174 961 aa15.48■□□□□ 0.07
SCAMP2-204ENST00000563829 DDX49Q9Y6V7 483 aaKnown RBP15.48■□□□□ 0.07
SCAMP2-204ENST00000563829 SMAP1Q8IYB5 467 aaPredicted RBP15.47■□□□□ 0.07
SCAMP2-204ENST00000563829 MAGI2Q86UL8 1455 aa15.47■□□□□ 0.07
SCAMP2-204ENST00000563829 NCLP19338 710 aaKnown RBP15.47■□□□□ 0.07
SCAMP2-204ENST00000563829 DDIT3P35638 169 aa15.47■□□□□ 0.07
SCAMP2-204ENST00000563829 TERF1P54274 439 aa15.47■□□□□ 0.07
SCAMP2-204ENST00000563829 LAMC3Q9Y6N6 1575 aa15.47■□□□□ 0.07
SCAMP2-204ENST00000563829 RAB3GAP1Q15042 981 aa15.46■□□□□ 0.07
SCAMP2-204ENST00000563829 RRP7AQ9Y3A4 280 aaKnown RBP15.46■□□□□ 0.07
SCAMP2-204ENST00000563829 NINLQ9Y2I6 1382 aa15.46■□□□□ 0.07
SCAMP2-204ENST00000563829 ZBTB7CA1YPR0 619 aa15.46■□□□□ 0.07
SCAMP2-204ENST00000563829 RARSP54136 660 aaKnown RBP15.46■□□□□ 0.07
SCAMP2-204ENST00000563829 TRPM1Q7Z4N2 1603 aa15.46■□□□□ 0.07
SCAMP2-204ENST00000563829 PRG4Q92954 1404 aaPredicted RBP15.46■□□□□ 0.06
SCAMP2-204ENST00000563829 WWC1Q8IX03 1113 aa15.46■□□□□ 0.06
SCAMP2-204ENST00000563829 KDM5DQ9BY66 1539 aa15.45■□□□□ 0.06
SCAMP2-204ENST00000563829 CCDC144AA2RUR9 1427 aa15.45■□□□□ 0.06
SCAMP2-204ENST00000563829 ADGBQ8N7X0 1667 aa15.45■□□□□ 0.06
SCAMP2-204ENST00000563829 GOLGA6L22H0YM25 854 aa15.44■□□□□ 0.06
SCAMP2-204ENST00000563829 SMC5Q8IY18 1101 aa15.44■□□□□ 0.06
SCAMP2-204ENST00000563829 SSFA2P28290 1259 aa15.44■□□□□ 0.06
SCAMP2-204ENST00000563829 CEP170Q5SW79 1584 aa15.44■□□□□ 0.06
SCAMP2-204ENST00000563829 CLASP1Q7Z460 1538 aa15.43■□□□□ 0.06
SCAMP2-204ENST00000563829 ZMYM3Q14202 1370 aa15.43■□□□□ 0.06
SCAMP2-204ENST00000563829 ADGRL2O95490 1459 aa15.43■□□□□ 0.06
SCAMP2-204ENST00000563829 CIZ1Q9ULV3 898 aaPredicted RBP15.42■□□□□ 0.06
SCAMP2-204ENST00000563829 TSPY4P0CV99 314 aa15.42■□□□□ 0.06
SCAMP2-204ENST00000563829 TSPY10P0CW01 314 aa15.42■□□□□ 0.06
SCAMP2-204ENST00000563829 PTMSP20962 102 aa15.42■□□□□ 0.06
SCAMP2-204ENST00000563829 NOL7Q9UMY1 257 aaKnown RBP15.42■□□□□ 0.06
SCAMP2-204ENST00000563829 GPRASP1Q5JY77 1395 aa15.42■□□□□ 0.06
SCAMP2-204ENST00000563829 NCOA3Q9Y6Q9 1424 aa15.41■□□□□ 0.06
SCAMP2-204ENST00000563829 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.41■□□□□ 0.06
SCAMP2-204ENST00000563829 FTSJ3Q8IY81 847 aaKnown RBP15.41■□□□□ 0.06
SCAMP2-204ENST00000563829 DYNC1I1O14576 645 aa15.4■□□□□ 0.06
SCAMP2-204ENST00000563829 CD2BP2O95400 341 aaKnown RBP15.4■□□□□ 0.06
SCAMP2-204ENST00000563829 CAVIN1Q6NZI2 390 aaKnown RBP15.4■□□□□ 0.06
SCAMP2-204ENST00000563829 WDR7Q9Y4E6 1490 aa15.4■□□□□ 0.06
SCAMP2-204ENST00000563829 MTERF4Q7Z6M4 381 aaKnown RBP15.4■□□□□ 0.06
SCAMP2-204ENST00000563829 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.4■□□□□ 0.06
SCAMP2-204ENST00000563829 SNX21Q969T3 373 aa15.4■□□□□ 0.06
SCAMP2-204ENST00000563829 IQGAP2Q13576 1575 aa15.4■□□□□ 0.06
SCAMP2-204ENST00000563829 GPATCH8Q9UKJ3 1502 aaKnown RBP15.39■□□□□ 0.05
SCAMP2-204ENST00000563829 ZNF500O60304 480 aaPredicted RBP15.39■□□□□ 0.05
SCAMP2-204ENST00000563829 KLHL40Q2TBA0 621 aa15.39■□□□□ 0.05
SCAMP2-204ENST00000563829 PIK3C2GO75747 1445 aa15.39■□□□□ 0.05
SCAMP2-204ENST00000563829 NUP153P49790 1475 aaKnown RBP15.38■□□□□ 0.05
SCAMP2-204ENST00000563829 PRDM15P57071 1507 aaPredicted RBP15.38■□□□□ 0.05
SCAMP2-204ENST00000563829 MVPQ14764 893 aaKnown RBP15.38■□□□□ 0.05
SCAMP2-204ENST00000563829 MCTP1Q6DN14 999 aa15.38■□□□□ 0.05
SCAMP2-204ENST00000563829 RBM42Q9BTD8 480 aaKnown RBP15.38■□□□□ 0.05
SCAMP2-204ENST00000563829 RBSNQ9H1K0 784 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms