RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 KDM2AQ9Y2K7 1162 aa8.82□□□□□ -1
CDR2-203ENST00000563573 TULP1O00294 542 aaPredicted RBP8.81□□□□□ -1
CDR2-203ENST00000563573 RBM26Q5T8P6 1007 aaKnown RBP8.81□□□□□ -1
CDR2-203ENST00000563573 RSPH4AQ5TD94 716 aa8.81□□□□□ -1
CDR2-203ENST00000563573 GNPATO15228 680 aa8.8□□□□□ -1
CDR2-203ENST00000563573 KMT5BQ4FZB7 885 aa8.8□□□□□ -1
CDR2-203ENST00000563573 IRX2Q9BZI1 471 aaPredicted RBP8.8□□□□□ -1
CDR2-203ENST00000563573 PXYLP1Q8TE99 480 aa8.79□□□□□ -1
CDR2-203ENST00000563573 GGCXP38435 758 aa8.78□□□□□ -1
CDR2-203ENST00000563573 PCDHB3Q9Y5E6 796 aa8.78□□□□□ -1
CDR2-203ENST00000563573 ABCC9O60706 1549 aa8.76□□□□□ -1.01
CDR2-203ENST00000563573 FAM161AQ3B820 660 aa8.76□□□□□ -1.01
CDR2-203ENST00000563573 METTL3Q86U44 580 aaKnown RBP8.76□□□□□ -1.01
CDR2-203ENST00000563573 ZNF516Q92618 1163 aa8.76□□□□□ -1.01
CDR2-203ENST00000563573 ACTN4O43707 911 aaKnown RBP8.75□□□□□ -1.01
CDR2-203ENST00000563573 ZPR1O75312 459 aa8.75□□□□□ -1.01
CDR2-203ENST00000563573 COPS2P61201 443 aa8.75□□□□□ -1.01
CDR2-203ENST00000563573 GPIHBP1Q8IV16 184 aa8.75□□□□□ -1.01
CDR2-203ENST00000563573 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.75□□□□□ -1.01
CDR2-203ENST00000563573 PPP1R18Q6NYC8 613 aa8.74□□□□□ -1.01
CDR2-203ENST00000563573 TMUB1Q9BVT8 246 aa8.74□□□□□ -1.01
CDR2-203ENST00000563573 CFHP08603 1231 aa8.73□□□□□ -1.01
CDR2-203ENST00000563573 GPR37O15354 613 aa8.72□□□□□ -1.01
CDR2-203ENST00000563573 LAPTM4AQ15012 233 aa8.72□□□□□ -1.01
CDR2-203ENST00000563573 V9GY48 417 aaPredicted RBP8.72□□□□□ -1.01
CDR2-203ENST00000563573 ZCCHC6Q5VYS8 1495 aaKnown RBP8.71□□□□□ -1.01
CDR2-203ENST00000563573 DAXXQ9UER7 740 aaPredicted RBP8.71□□□□□ -1.02
CDR2-203ENST00000563573 NR1I2O75469 434 aa8.7□□□□□ -1.02
CDR2-203ENST00000563573 SLC10A3P09131 477 aa8.7□□□□□ -1.02
CDR2-203ENST00000563573 BLOC1S3Q6QNY0 202 aa8.7□□□□□ -1.02
CDR2-203ENST00000563573 FECHP22830 423 aa8.69□□□□□ -1.02
CDR2-203ENST00000563573 SULF1Q8IWU6 871 aa8.69□□□□□ -1.02
CDR2-203ENST00000563573 NKX2-3Q8TAU0 364 aa8.68□□□□□ -1.02
CDR2-203ENST00000563573 PRKD2Q9BZL6 878 aa8.68□□□□□ -1.02
CDR2-203ENST00000563573 RDH13Q8NBN7 331 aa8.65□□□□□ -1.02
CDR2-203ENST00000563573 DCAF1Q9Y4B6 1507 aa8.64□□□□□ -1.03
CDR2-203ENST00000563573 MAP2K5Q13163 448 aa8.64□□□□□ -1.03
CDR2-203ENST00000563573 DDX11L8A8MPP1 907 aa8.63□□□□□ -1.03
CDR2-203ENST00000563573 ADH1BP00325 375 aa8.63□□□□□ -1.03
CDR2-203ENST00000563573 MINK1Q8N4C8 1332 aaPredicted RBP8.62□□□□□ -1.03
CDR2-203ENST00000563573 GFRA3O60609 400 aa8.62□□□□□ -1.03
CDR2-203ENST00000563573 GRIPAP1Q4V328 841 aa8.62□□□□□ -1.03
CDR2-203ENST00000563573 SCUBE3Q8IX30 993 aa8.62□□□□□ -1.03
CDR2-203ENST00000563573 ANKLE1Q8NAG6 615 aa8.62□□□□□ -1.03
CDR2-203ENST00000563573 RNF223E7ERA6 249 aa8.61□□□□□ -1.03
CDR2-203ENST00000563573 IRF6O14896 467 aa8.61□□□□□ -1.03
CDR2-203ENST00000563573 ATP6V1AP38606 617 aa8.61□□□□□ -1.03
CDR2-203ENST00000563573 GCGRP47871 477 aa8.61□□□□□ -1.03
CDR2-203ENST00000563573 Q6ZNB5 142 aa8.61□□□□□ -1.03
CDR2-203ENST00000563573 NACADO15069 1562 aa8.6□□□□□ -1.03
CDR2-203ENST00000563573 MYO15BQ96JP2 1530 aa8.59□□□□□ -1.03
CDR2-203ENST00000563573 TLL1O43897 1013 aa8.59□□□□□ -1.03
CDR2-203ENST00000563573 PHOX2BQ99453 314 aa8.59□□□□□ -1.03
CDR2-203ENST00000563573 SLC6A16Q9GZN6 736 aa8.59□□□□□ -1.03
CDR2-203ENST00000563573 NRG2O14511 850 aaPredicted RBP8.58□□□□□ -1.04
CDR2-203ENST00000563573 SLC19A1P41440 591 aa8.58□□□□□ -1.04
CDR2-203ENST00000563573 MORN1Q5T089 497 aa8.58□□□□□ -1.04
CDR2-203ENST00000563573 SPSB2Q99619 263 aa8.58□□□□□ -1.04
CDR2-203ENST00000563573 S1PR4O95977 384 aa8.57□□□□□ -1.04
CDR2-203ENST00000563573 FUT2Q10981 343 aa8.57□□□□□ -1.04
CDR2-203ENST00000563573 PUS10Q3MIT2 529 aaKnown RBP8.57□□□□□ -1.04
CDR2-203ENST00000563573 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.57□□□□□ -1.04
CDR2-203ENST00000563573 SALL2Q9Y467 1007 aaPredicted RBP8.57□□□□□ -1.04
CDR2-203ENST00000563573 RB1CC1Q8TDY2 1594 aa8.56□□□□□ -1.04
CDR2-203ENST00000563573 NLRP7Q8WX94 980 aa8.56□□□□□ -1.04
CDR2-203ENST00000563573 FMNL1O95466 1100 aaPredicted RBP8.55□□□□□ -1.04
CDR2-203ENST00000563573 PDZRN3Q9UPQ7 1066 aa8.55□□□□□ -1.04
CDR2-203ENST00000563573 CD46P15529 392 aa8.53□□□□□ -1.04
CDR2-203ENST00000563573 CLCN1P35523 988 aa8.53□□□□□ -1.04
CDR2-203ENST00000563573 USP46P62068 366 aa8.53□□□□□ -1.04
CDR2-203ENST00000563573 Q3C1V9 767 aa8.53□□□□□ -1.04
CDR2-203ENST00000563573 SPRYD7Q5W111 196 aa8.53□□□□□ -1.04
CDR2-203ENST00000563573 ZNF598Q86UK7 904 aaKnown RBP8.53□□□□□ -1.04
CDR2-203ENST00000563573 SLC27A5Q9Y2P5 690 aa8.53□□□□□ -1.04
CDR2-203ENST00000563573 MDM2Q00987 491 aaPredicted RBP8.52□□□□□ -1.05
CDR2-203ENST00000563573 LMOD2Q6P5Q4 547 aa8.52□□□□□ -1.05
CDR2-203ENST00000563573 TRAF7Q6Q0C0 670 aa8.52□□□□□ -1.05
CDR2-203ENST00000563573 KRI1Q8N9T8 703 aaKnown RBP8.52□□□□□ -1.05
CDR2-203ENST00000563573 CCDC102AQ96A19 550 aa8.52□□□□□ -1.05
CDR2-203ENST00000563573 THAP11Q96EK4 314 aa8.52□□□□□ -1.05
CDR2-203ENST00000563573 PPEF1O14829 653 aaPredicted RBP8.51□□□□□ -1.05
CDR2-203ENST00000563573 SLC24A1O60721 1099 aa8.51□□□□□ -1.05
CDR2-203ENST00000563573 KDM4AO75164 1064 aa8.51□□□□□ -1.05
CDR2-203ENST00000563573 BRICD5Q6PL45 260 aa8.51□□□□□ -1.05
CDR2-203ENST00000563573 GPCPD1Q9NPB8 672 aa8.51□□□□□ -1.05
CDR2-203ENST00000563573 RPIAP49247 311 aa8.49□□□□□ -1.05
CDR2-203ENST00000563573 PRR20EP86478 221 aa8.49□□□□□ -1.05
CDR2-203ENST00000563573 PRR20CP86479 221 aa8.49□□□□□ -1.05
CDR2-203ENST00000563573 PRR20DP86480 221 aa8.49□□□□□ -1.05
CDR2-203ENST00000563573 PRR20BP86481 221 aa8.49□□□□□ -1.05
CDR2-203ENST00000563573 PRR20AP86496 221 aa8.49□□□□□ -1.05
CDR2-203ENST00000563573 LIAT1Q6ZQX7 453 aa8.49□□□□□ -1.05
CDR2-203ENST00000563573 MSS51Q4VC12 460 aa8.48□□□□□ -1.05
CDR2-203ENST00000563573 ZNF697Q5TEC3 545 aa8.48□□□□□ -1.05
CDR2-203ENST00000563573 CD2BP2O95400 341 aaKnown RBP8.47□□□□□ -1.05
CDR2-203ENST00000563573 BARGINQ6ZT62 677 aa8.47□□□□□ -1.05
CDR2-203ENST00000563573 FAM160A2Q8N612 972 aaPredicted RBP8.47□□□□□ -1.05
CDR2-203ENST00000563573 EMID1Q96A84 441 aaPredicted RBP8.47□□□□□ -1.05
CDR2-203ENST00000563573 NUTM1Q86Y26 1132 aa8.45□□□□□ -1.06
CDR2-203ENST00000563573 FAM217BQ9NTX9 383 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms