RNA–Protein interactions for RNA: ENST00000562948.1

SCAPER-205, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-205ENST00000562948 CNTLNQ9NXG0 1405 aa10.26□□□□□ -0.77
SCAPER-205ENST00000562948 TONSLQ96HA7 1378 aa10.26□□□□□ -0.77
SCAPER-205ENST00000562948 ASXL1Q8IXJ9 1541 aa10.26□□□□□ -0.77
SCAPER-205ENST00000562948 MYO3AQ8NEV4 1616 aa10.26□□□□□ -0.77
SCAPER-205ENST00000562948 KDM2AQ9Y2K7 1162 aa10.25□□□□□ -0.77
SCAPER-205ENST00000562948 ARID4BQ4LE39 1312 aaPredicted RBP10.25□□□□□ -0.77
SCAPER-205ENST00000562948 KANK1Q14678 1352 aa10.25□□□□□ -0.77
SCAPER-205ENST00000562948 A2ML1A8K2U0 1454 aa10.25□□□□□ -0.77
SCAPER-205ENST00000562948 KDM4FA0A1W2PPD8 638 aa10.25□□□□□ -0.77
SCAPER-205ENST00000562948 PTPRMP28827 1452 aa10.24□□□□□ -0.77
SCAPER-205ENST00000562948 IQGAP1P46940 1657 aa10.23□□□□□ -0.77
SCAPER-205ENST00000562948 ADGRB1O14514 1584 aa10.23□□□□□ -0.77
SCAPER-205ENST00000562948 ZFYVE9O95405 1425 aa10.22□□□□□ -0.77
SCAPER-205ENST00000562948 PLPPR3Q6T4P5 718 aa10.22□□□□□ -0.77
SCAPER-205ENST00000562948 PIK3C2GO75747 1445 aa10.21□□□□□ -0.77
SCAPER-205ENST00000562948 TSHZ2Q9NRE2 1034 aa10.21□□□□□ -0.77
SCAPER-205ENST00000562948 RALGAPBQ86X10 1494 aa10.21□□□□□ -0.78
SCAPER-205ENST00000562948 ZNF326Q5BKZ1 582 aaKnown RBP10.2□□□□□ -0.78
SCAPER-205ENST00000562948 KDM5AP29375 1690 aaKnown RBP10.19□□□□□ -0.78
SCAPER-205ENST00000562948 TIMELESSQ9UNS1 1208 aa10.19□□□□□ -0.78
SCAPER-205ENST00000562948 MYOM2P54296 1465 aa10.19□□□□□ -0.78
SCAPER-205ENST00000562948 LTKP29376 864 aa10.18□□□□□ -0.78
SCAPER-205ENST00000562948 POLR1AO95602 1720 aaPredicted RBP10.18□□□□□ -0.78
SCAPER-205ENST00000562948 ZNF142P52746 1687 aaPredicted RBP10.18□□□□□ -0.78
SCAPER-205ENST00000562948 KIAA1210Q9ULL0 1709 aa10.18□□□□□ -0.78
SCAPER-205ENST00000562948 ZNF316A6NFI3 1004 aaPredicted RBP10.18□□□□□ -0.78
SCAPER-205ENST00000562948 CFAP70Q5T0N1 1121 aa10.18□□□□□ -0.78
SCAPER-205ENST00000562948 ARHGEF28Q8N1W1 1705 aaKnown RBP10.17□□□□□ -0.78
SCAPER-205ENST00000562948 PPP6R1Q9UPN7 881 aa10.17□□□□□ -0.78
SCAPER-205ENST00000562948 CEP170BQ9Y4F5 1589 aaPredicted RBP10.16□□□□□ -0.78
SCAPER-205ENST00000562948 GPRASP1Q5JY77 1395 aa10.16□□□□□ -0.78
SCAPER-205ENST00000562948 HSPA5P11021 654 aaKnown RBP10.16□□□□□ -0.78
SCAPER-205ENST00000562948 SUPT16HQ9Y5B9 1047 aaKnown RBP10.16□□□□□ -0.78
SCAPER-205ENST00000562948 LAMC1P11047 1609 aa10.16□□□□□ -0.78
SCAPER-205ENST00000562948 TMEM132EQ6IEE7 984 aa10.16□□□□□ -0.78
SCAPER-205ENST00000562948 TNRQ92752 1358 aa10.15□□□□□ -0.78
SCAPER-205ENST00000562948 WASHC2AQ641Q2 1341 aa10.15□□□□□ -0.78
SCAPER-205ENST00000562948 ALKQ9UM73 1620 aa10.15□□□□□ -0.78
SCAPER-205ENST00000562948 MIER1Q8N108 512 aa10.15□□□□□ -0.79
SCAPER-205ENST00000562948 SETD1BQ9UPS6 1966 aaKnown RBP10.14□□□□□ -0.79
SCAPER-205ENST00000562948 CHGAP10645 457 aaKnown RBP10.14□□□□□ -0.79
SCAPER-205ENST00000562948 TESK2Q96S53 571 aa10.14□□□□□ -0.79
SCAPER-205ENST00000562948 STRCQ7RTU9 1775 aa10.14□□□□□ -0.79
SCAPER-205ENST00000562948 STRCP1A6NGW2 1772 aa10.14□□□□□ -0.79
SCAPER-205ENST00000562948 MYOM1P52179 1685 aa10.13□□□□□ -0.79
SCAPER-205ENST00000562948 ARHGAP23Q9P227 1491 aa10.13□□□□□ -0.79
SCAPER-205ENST00000562948 SLC52A1Q9NWF4 448 aa10.13□□□□□ -0.79
SCAPER-205ENST00000562948 SLIT1O75093 1534 aa10.13□□□□□ -0.79
SCAPER-205ENST00000562948 METP08581 1390 aa10.13□□□□□ -0.79
SCAPER-205ENST00000562948 EP400Q96L91 3159 aa10.13□□□□□ -0.79
SCAPER-205ENST00000562948 USP47Q96K76 1375 aa10.12□□□□□ -0.79
SCAPER-205ENST00000562948 ADAMTS13Q76LX8 1427 aa10.12□□□□□ -0.79
SCAPER-205ENST00000562948 MED14O60244 1454 aa10.12□□□□□ -0.79
SCAPER-205ENST00000562948 ST20-MTHFSA0A0A6YYL1 179 aa10.12□□□□□ -0.79
SCAPER-205ENST00000562948 DISP3Q9P2K9 1392 aa10.11□□□□□ -0.79
SCAPER-205ENST00000562948 SETBP1Q9Y6X0 1596 aa10.11□□□□□ -0.79
SCAPER-205ENST00000562948 GOLGB1Q14789 3259 aaKnown RBP10.11□□□□□ -0.79
SCAPER-205ENST00000562948 TMEM2Q9UHN6 1383 aa10.11□□□□□ -0.79
SCAPER-205ENST00000562948 PTPRUQ92729 1446 aa10.11□□□□□ -0.79
SCAPER-205ENST00000562948 RIMS2Q9UQ26 1411 aa10.11□□□□□ -0.79
SCAPER-205ENST00000562948 ROCK2O75116 1388 aaKnown RBP10.11□□□□□ -0.79
SCAPER-205ENST00000562948 QRICH2Q9H0J4 1663 aa10.1□□□□□ -0.79
SCAPER-205ENST00000562948 LMTK3Q96Q04 1460 aa10.1□□□□□ -0.79
SCAPER-205ENST00000562948 NLRP1Q9C000 1473 aa10.1□□□□□ -0.79
SCAPER-205ENST00000562948 C14orf93Q9H972 538 aaKnown RBP10.1□□□□□ -0.79
SCAPER-205ENST00000562948 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.09□□□□□ -0.79
SCAPER-205ENST00000562948 SRCAPQ6ZRS2 3230 aa10.09□□□□□ -0.79
SCAPER-205ENST00000562948 PLEKHH1Q9ULM0 1364 aa10.08□□□□□ -0.8
SCAPER-205ENST00000562948 KIF7Q2M1P5 1343 aa10.08□□□□□ -0.8
SCAPER-205ENST00000562948 CARD11Q9BXL7 1154 aa10.08□□□□□ -0.8
SCAPER-205ENST00000562948 RGPD8O14715 1765 aaPredicted RBP10.07□□□□□ -0.8
SCAPER-205ENST00000562948 TULP4Q9NRJ4 1543 aa10.06□□□□□ -0.8
SCAPER-205ENST00000562948 CHD2O14647 1828 aaKnown RBP10.06□□□□□ -0.8
SCAPER-205ENST00000562948 HSPA2P54652 639 aa10.05□□□□□ -0.8
SCAPER-205ENST00000562948 XIRP1Q702N8 1843 aaKnown RBP10.05□□□□□ -0.8
SCAPER-205ENST00000562948 SLC26A8Q96RN1 970 aa10.04□□□□□ -0.8
SCAPER-205ENST00000562948 SCAF11Q99590 1463 aaKnown RBP10.04□□□□□ -0.8
SCAPER-205ENST00000562948 XRN1Q8IZH2 1706 aaKnown RBP10.04□□□□□ -0.8
SCAPER-205ENST00000562948 TRAK1Q9UPV9 953 aa10.04□□□□□ -0.8
SCAPER-205ENST00000562948 KNDC1Q76NI1 1749 aa10.04□□□□□ -0.8
SCAPER-205ENST00000562948 RPGRIP1LQ68CZ1 1315 aa10.03□□□□□ -0.8
SCAPER-205ENST00000562948 CCDC7Q96M83 1385 aa10.03□□□□□ -0.8
SCAPER-205ENST00000562948 DDX10Q13206 875 aaKnown RBP10.03□□□□□ -0.8
SCAPER-205ENST00000562948 WAPLQ7Z5K2 1190 aa10.03□□□□□ -0.8
SCAPER-205ENST00000562948 RBM33Q96EV2 1170 aaKnown RBP10.03□□□□□ -0.8
SCAPER-205ENST00000562948 ESF1Q9H501 851 aaKnown RBP10.03□□□□□ -0.8
SCAPER-205ENST00000562948 ROBO2Q9HCK4 1378 aa10.03□□□□□ -0.8
SCAPER-205ENST00000562948 EIF4G2P78344 907 aaKnown RBP eCLIP10.03□□□□□ -0.8
SCAPER-205ENST00000562948 YTHDC2Q9H6S0 1430 aaKnown RBP10.03□□□□□ -0.8
SCAPER-205ENST00000562948 USP32Q8NFA0 1604 aa10.02□□□□□ -0.81
SCAPER-205ENST00000562948 NCKAP5LQ9HCH0 1330 aa10.01□□□□□ -0.81
SCAPER-205ENST00000562948 UTRNP46939 3433 aa10.01□□□□□ -0.81
SCAPER-205ENST00000562948 NALCNQ8IZF0 1738 aa10.01□□□□□ -0.81
SCAPER-205ENST00000562948 PLEKHG1Q9ULL1 1385 aa10.01□□□□□ -0.81
SCAPER-205ENST00000562948 STK26Q9P289 416 aa10.01□□□□□ -0.81
SCAPER-205ENST00000562948 VGFO15240 615 aaPredicted RBP10□□□□□ -0.81
SCAPER-205ENST00000562948 SAFB2Q14151 953 aaKnown RBP eCLIP10□□□□□ -0.81
SCAPER-205ENST00000562948 TXNDC2Q86VQ3 553 aa10□□□□□ -0.81
SCAPER-205ENST00000562948 CPS1P31327 1500 aa10□□□□□ -0.81
SCAPER-205ENST00000562948 ANO8Q9HCE9 1232 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms