RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 MYSM1Q5VVJ2 828 aa11.27□□□□□ -0.61
CHD9-205ENST00000562785 HS3ST6Q96QI5 342 aa11.27□□□□□ -0.61
CHD9-205ENST00000562785 VPS9D1Q9Y2B5 631 aa11.27□□□□□ -0.61
CHD9-205ENST00000562785 POTEB3A0JP26 581 aa11.26□□□□□ -0.61
CHD9-205ENST00000562785 DIXDC1Q155Q3 683 aa11.26□□□□□ -0.61
CHD9-205ENST00000562785 LCE2DQ5TA82 110 aaPredicted RBP11.26□□□□□ -0.61
CHD9-205ENST00000562785 POTEBQ6S5H4 581 aa11.26□□□□□ -0.61
CHD9-205ENST00000562785 DDX11L8A8MPP1 907 aa11.25□□□□□ -0.61
CHD9-205ENST00000562785 TBC1D2Q9BYX2 928 aa11.25□□□□□ -0.61
CHD9-205ENST00000562785 SEPT9Q9UHD8 586 aaPredicted RBP11.25□□□□□ -0.61
CHD9-205ENST00000562785 FAM98CQ17RN3 349 aaKnown RBP11.23□□□□□ -0.61
CHD9-205ENST00000562785 TK2O00142 265 aa11.22□□□□□ -0.61
CHD9-205ENST00000562785 SPIRE2Q8WWL2 714 aa11.22□□□□□ -0.61
CHD9-205ENST00000562785 CLK2P49760 499 aaKnown RBP11.21□□□□□ -0.61
CHD9-205ENST00000562785 SWT1Q5T5J6 900 aaKnown RBP11.21□□□□□ -0.61
CHD9-205ENST00000562785 LAPTM4BQ86VI4 370 aa11.21□□□□□ -0.61
CHD9-205ENST00000562785 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.21□□□□□ -0.61
CHD9-205ENST00000562785 NBPF3Q9H094 633 aa11.21□□□□□ -0.61
CHD9-205ENST00000562785 BHMG1C9JSJ3 638 aaPredicted RBP11.2□□□□□ -0.62
CHD9-205ENST00000562785 RDH13Q8NBN7 331 aa11.2□□□□□ -0.62
CHD9-205ENST00000562785 PROCA1Q8NCQ7 364 aaPredicted RBP11.2□□□□□ -0.62
CHD9-205ENST00000562785 POLR3EQ9NVU0 708 aa11.2□□□□□ -0.62
CHD9-205ENST00000562785 NUTM1Q86Y26 1132 aa11.18□□□□□ -0.62
CHD9-205ENST00000562785 LSM11P83369 360 aaKnown RBP eCLIP11.17□□□□□ -0.62
CHD9-205ENST00000562785 FLIIQ13045 1269 aa11.17□□□□□ -0.62
CHD9-205ENST00000562785 RSPH4AQ5TD94 716 aa11.17□□□□□ -0.62
CHD9-205ENST00000562785 SLC10A3P09131 477 aa11.16□□□□□ -0.62
CHD9-205ENST00000562785 GJA5P36382 358 aa11.16□□□□□ -0.62
CHD9-205ENST00000562785 TUSC1Q2TAM9 212 aa11.16□□□□□ -0.62
CHD9-205ENST00000562785 LIMD1Q9UGP4 676 aa11.16□□□□□ -0.62
CHD9-205ENST00000562785 SPTLC1O15269 473 aa11.15□□□□□ -0.62
CHD9-205ENST00000562785 GCGRP47871 477 aa11.15□□□□□ -0.62
CHD9-205ENST00000562785 HDGFP51858 240 aaKnown RBP11.15□□□□□ -0.62
CHD9-205ENST00000562785 ADGRD1Q6QNK2 874 aa11.15□□□□□ -0.62
CHD9-205ENST00000562785 RIC3Q7Z5B4 369 aa11.15□□□□□ -0.62
CHD9-205ENST00000562785 KDM4AO75164 1064 aa11.14□□□□□ -0.63
CHD9-205ENST00000562785 SLC4A3P48751 1232 aa11.14□□□□□ -0.63
CHD9-205ENST00000562785 USP46P62068 366 aa11.14□□□□□ -0.63
CHD9-205ENST00000562785 RSBN1LQ6PCB5 846 aaPredicted RBP11.14□□□□□ -0.63
CHD9-205ENST00000562785 SAMD7Q7Z3H4 446 aa11.14□□□□□ -0.63
CHD9-205ENST00000562785 SLF2Q8IX21 1173 aa11.14□□□□□ -0.63
CHD9-205ENST00000562785 MOXD2PA6NHM9 499 aa11.13□□□□□ -0.63
CHD9-205ENST00000562785 ZFRQ96KR1 1074 aaKnown RBP11.13□□□□□ -0.63
CHD9-205ENST00000562785 ATP1B4Q9UN42 357 aaPredicted RBP11.13□□□□□ -0.63
CHD9-205ENST00000562785 HRO43593 1189 aa11.12□□□□□ -0.63
CHD9-205ENST00000562785 MRPL50Q8N5N7 158 aaKnown RBP11.12□□□□□ -0.63
CHD9-205ENST00000562785 PPP2R2DQ66LE6 453 aa11.11□□□□□ -0.63
CHD9-205ENST00000562785 HOXA2O43364 376 aa11.1□□□□□ -0.63
CHD9-205ENST00000562785 NDUFV2P19404 249 aa11.1□□□□□ -0.63
CHD9-205ENST00000562785 RFC5P40937 340 aa11.09□□□□□ -0.63
CHD9-205ENST00000562785 MCM6Q14566 821 aa11.09□□□□□ -0.63
CHD9-205ENST00000562785 ZMYND15Q9H091 742 aa11.09□□□□□ -0.63
CHD9-205ENST00000562785 FBXO31Q5XUX0 539 aaPredicted RBP11.08□□□□□ -0.64
CHD9-205ENST00000562785 CFHP08603 1231 aa11.07□□□□□ -0.64
CHD9-205ENST00000562785 LRCH3Q96II8 777 aa11.06□□□□□ -0.64
CHD9-205ENST00000562785 LILRB3O75022 631 aa11.05□□□□□ -0.64
CHD9-205ENST00000562785 RNF40O75150 1001 aa11.05□□□□□ -0.64
CHD9-205ENST00000562785 QPCTQ16769 361 aa11.05□□□□□ -0.64
CHD9-205ENST00000562785 PRPF38BQ5VTL8 546 aaKnown RBP11.05□□□□□ -0.64
CHD9-205ENST00000562785 NECTIN2Q92692 538 aa11.05□□□□□ -0.64
CHD9-205ENST00000562785 PCDHB15Q9Y5E8 787 aa11.05□□□□□ -0.64
CHD9-205ENST00000562785 FDX1P10109 184 aa11.04□□□□□ -0.64
CHD9-205ENST00000562785 CSPP1Q1MSJ5 1256 aa11.04□□□□□ -0.64
CHD9-205ENST00000562785 ANKRD13DQ6ZTN6 518 aa11.04□□□□□ -0.64
CHD9-205ENST00000562785 BANK1Q8NDB2 785 aa11.04□□□□□ -0.64
CHD9-205ENST00000562785 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.04□□□□□ -0.64
CHD9-205ENST00000562785 FUT2Q10981 343 aa11.03□□□□□ -0.64
CHD9-205ENST00000562785 TMEM259Q4ZIN3 620 aa11.03□□□□□ -0.64
CHD9-205ENST00000562785 SPDYE5A6NIY4 337 aa11.02□□□□□ -0.65
CHD9-205ENST00000562785 KMT5BQ4FZB7 885 aa11.02□□□□□ -0.65
CHD9-205ENST00000562785 GRIPAP1Q4V328 841 aa11.02□□□□□ -0.65
CHD9-205ENST00000562785 ANKK1Q8NFD2 765 aa11.02□□□□□ -0.65
CHD9-205ENST00000562785 HLA-CQ95604 372 aa11.02□□□□□ -0.65
CHD9-205ENST00000562785 ZBTB3Q9H5J0 574 aa11.02□□□□□ -0.65
CHD9-205ENST00000562785 PCDHGC3Q9UN70 934 aa11.02□□□□□ -0.65
CHD9-205ENST00000562785 GUCA2AQ02747 115 aa11.01□□□□□ -0.65
CHD9-205ENST00000562785 SOWAHBA6NEL2 793 aa11□□□□□ -0.65
CHD9-205ENST00000562785 HRCP23327 699 aa11□□□□□ -0.65
CHD9-205ENST00000562785 CABLES1Q8TDN4 633 aa11□□□□□ -0.65
CHD9-205ENST00000562785 STAC3Q96MF2 364 aa11□□□□□ -0.65
CHD9-205ENST00000562785 KRTAP3-3Q9BYR6 98 aa11□□□□□ -0.65
CHD9-205ENST00000562785 KRTAP3-2Q9BYR7 98 aa11□□□□□ -0.65
CHD9-205ENST00000562785 GOLGA8CPA6NN73 597 aa10.99□□□□□ -0.65
CHD9-205ENST00000562785 UBTFP17480 764 aaKnown RBP10.99□□□□□ -0.65
CHD9-205ENST00000562785 ATP6V1AP38606 617 aa10.99□□□□□ -0.65
CHD9-205ENST00000562785 RTL5Q5HYW3 569 aaPredicted RBP10.99□□□□□ -0.65
CHD9-205ENST00000562785 A6NJR5 290 aa10.98□□□□□ -0.65
CHD9-205ENST00000562785 NUTM2BA6NNL0 878 aaPredicted RBP10.98□□□□□ -0.65
CHD9-205ENST00000562785 NUTM2EB1AL46 878 aaPredicted RBP10.98□□□□□ -0.65
CHD9-205ENST00000562785 SUPT5HO00267 1087 aaKnown RBP10.98□□□□□ -0.65
CHD9-205ENST00000562785 ACTN4O43707 911 aaKnown RBP10.98□□□□□ -0.65
CHD9-205ENST00000562785 NUTM2DQ5VT03 806 aaPredicted RBP10.98□□□□□ -0.65
CHD9-205ENST00000562785 NUTM2AQ8IVF1 878 aaPredicted RBP10.98□□□□□ -0.65
CHD9-205ENST00000562785 PRR14Q9BWN1 585 aa10.98□□□□□ -0.65
CHD9-205ENST00000562785 SOCS7O14512 581 aa10.97□□□□□ -0.65
CHD9-205ENST00000562785 BCAMP50895 628 aa10.96□□□□□ -0.65
CHD9-205ENST00000562785 MTMR2Q13614 643 aa10.96□□□□□ -0.65
CHD9-205ENST00000562785 WNT2BQ93097 391 aa10.96□□□□□ -0.65
CHD9-205ENST00000562785 SNRKQ9NRH2 765 aa10.96□□□□□ -0.65
CHD9-205ENST00000562785 MORN1Q5T089 497 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms