RNA–Protein interactions for RNA: ENST00000562710.1

LINC00565-201, long intergenic non-protein coding RNA 565, humanhuman

BASIC

Gene LINC00565, Length 2,331 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00565-201ENST00000562710 PTPRTO14522 1441 aa28.7■■■□□ 2.18
LINC00565-201ENST00000562710 UHRF1BP1LA0JNW5 1464 aa28.7■■■□□ 2.18
LINC00565-201ENST00000562710 NPM2Q86SE8 214 aaKnown RBP28.69■■■□□ 2.18
LINC00565-201ENST00000562710 CLTCL1P53675 1640 aa28.68■■■□□ 2.18
LINC00565-201ENST00000562710 WDR43Q15061 677 aaKnown RBP eCLIP28.68■■■□□ 2.18
LINC00565-201ENST00000562710 ZFYVE16Q7Z3T8 1539 aa28.67■■■□□ 2.18
LINC00565-201ENST00000562710 PLEKHH1Q9ULM0 1364 aa28.66■■■□□ 2.18
LINC00565-201ENST00000562710 DEPDC5O75140 1603 aa28.66■■■□□ 2.18
LINC00565-201ENST00000562710 ASXL1Q8IXJ9 1541 aa28.65■■■□□ 2.18
LINC00565-201ENST00000562710 AFAP1Q8N556 730 aa28.64■■■□□ 2.18
LINC00565-201ENST00000562710 DUSP27Q5VZP5 1158 aa28.63■■■□□ 2.17
LINC00565-201ENST00000562710 TET3O43151 1660 aa28.63■■■□□ 2.17
LINC00565-201ENST00000562710 MYOM1P52179 1685 aa28.63■■■□□ 2.17
LINC00565-201ENST00000562710 ARAP3Q8WWN8 1544 aa28.62■■■□□ 2.17
LINC00565-201ENST00000562710 ZNF521Q96K83 1311 aa28.62■■■□□ 2.17
LINC00565-201ENST00000562710 C20orf194Q5TEA3 1177 aa28.62■■■□□ 2.17
LINC00565-201ENST00000562710 PIK3C2GO75747 1445 aa28.62■■■□□ 2.17
LINC00565-201ENST00000562710 RTL5Q5HYW3 569 aaPredicted RBP28.6■■■□□ 2.17
LINC00565-201ENST00000562710 NPC1L1Q9UHC9 1359 aa28.6■■■□□ 2.17
LINC00565-201ENST00000562710 CLASP1Q7Z460 1538 aa28.59■■■□□ 2.17
LINC00565-201ENST00000562710 EIF3AQ14152 1382 aaKnown RBP28.59■■■□□ 2.17
LINC00565-201ENST00000562710 KIAA1210Q9ULL0 1709 aa28.59■■■□□ 2.17
LINC00565-201ENST00000562710 GOLGA2Q08379 1002 aa28.58■■■□□ 2.17
LINC00565-201ENST00000562710 KDM5AP29375 1690 aaKnown RBP28.56■■■□□ 2.16
LINC00565-201ENST00000562710 VWDEQ8N2E2 1590 aa28.55■■■□□ 2.16
LINC00565-201ENST00000562710 KDM2BQ8NHM5 1336 aa28.55■■■□□ 2.16
LINC00565-201ENST00000562710 KANK1Q14678 1352 aa28.55■■■□□ 2.16
LINC00565-201ENST00000562710 SKAP1Q86WV1 359 aa28.54■■■□□ 2.16
LINC00565-201ENST00000562710 NEURL4Q96JN8 1562 aa28.53■■■□□ 2.16
LINC00565-201ENST00000562710 ATP7AQ04656 1500 aa28.52■■■□□ 2.16
LINC00565-201ENST00000562710 INO80Q9ULG1 1556 aaPredicted RBP28.51■■■□□ 2.16
LINC00565-201ENST00000562710 SLFN5Q08AF3 891 aa28.51■■■□□ 2.15
LINC00565-201ENST00000562710 CENPQQ7L2Z9 268 aaPredicted RBP28.49■■■□□ 2.15
LINC00565-201ENST00000562710 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.49■■■□□ 2.15
LINC00565-201ENST00000562710 MAP3K4Q9Y6R4 1608 aa28.48■■■□□ 2.15
LINC00565-201ENST00000562710 SLC24A1O60721 1099 aa28.47■■■□□ 2.15
LINC00565-201ENST00000562710 TRMT2AQ8IZ69 625 aaKnown RBP28.47■■■□□ 2.15
LINC00565-201ENST00000562710 KIF3BO15066 747 aa28.46■■■□□ 2.15
LINC00565-201ENST00000562710 ABCA9Q8IUA7 1624 aa28.46■■■□□ 2.15
LINC00565-201ENST00000562710 MYOM2P54296 1465 aa28.46■■■□□ 2.15
LINC00565-201ENST00000562710 FANCAO15360 1455 aa28.45■■■□□ 2.15
LINC00565-201ENST00000562710 ERVK-7P63135 1459 aa28.45■■■□□ 2.15
LINC00565-201ENST00000562710 CCDC146Q8IYE0 955 aa28.45■■■□□ 2.14
LINC00565-201ENST00000562710 ABCA6Q8N139 1617 aa28.45■■■□□ 2.14
LINC00565-201ENST00000562710 CFAP70Q5T0N1 1121 aa28.44■■■□□ 2.14
LINC00565-201ENST00000562710 DDRGK1Q96HY6 314 aa28.42■■■□□ 2.14
LINC00565-201ENST00000562710 MROH1Q8NDA8 1641 aa28.42■■■□□ 2.14
LINC00565-201ENST00000562710 LAS1LQ9Y4W2 734 aaKnown RBP28.42■■■□□ 2.14
LINC00565-201ENST00000562710 UGGT1Q9NYU2 1555 aa28.42■■■□□ 2.14
LINC00565-201ENST00000562710 KIF1BO60333 1816 aa28.42■■■□□ 2.14
LINC00565-201ENST00000562710 APAF1O14727 1248 aa28.41■■■□□ 2.14
LINC00565-201ENST00000562710 ADGRF5Q8IZF2 1346 aa28.4■■■□□ 2.14
LINC00565-201ENST00000562710 NKTRP30414 1462 aaKnown RBP28.4■■■□□ 2.14
LINC00565-201ENST00000562710 SPINK5Q9NQ38 1064 aaPredicted RBP28.39■■■□□ 2.14
LINC00565-201ENST00000562710 USP35Q9P2H5 1018 aa28.39■■■□□ 2.14
LINC00565-201ENST00000562710 IFT172Q9UG01 1749 aa28.39■■■□□ 2.13
LINC00565-201ENST00000562710 CARD14Q9BXL6 1004 aa28.38■■■□□ 2.13
LINC00565-201ENST00000562710 ADGRL1O94910 1474 aa28.37■■■□□ 2.13
LINC00565-201ENST00000562710 PPM1GO15355 546 aaPredicted RBP28.36■■■□□ 2.13
LINC00565-201ENST00000562710 NEFMP07197 916 aa28.36■■■□□ 2.13
LINC00565-201ENST00000562710 EFCAB6Q5THR3 1501 aa28.35■■■□□ 2.13
LINC00565-201ENST00000562710 E9PSI1 815 aa28.35■■■□□ 2.13
LINC00565-201ENST00000562710 NGEFQ8N5V2 710 aa28.34■■■□□ 2.13
LINC00565-201ENST00000562710 MYO3AQ8NEV4 1616 aa28.34■■■□□ 2.13
LINC00565-201ENST00000562710 MROH2AA6NES4 1674 aa28.33■■■□□ 2.13
LINC00565-201ENST00000562710 FAM161AQ3B820 660 aa28.32■■■□□ 2.12
LINC00565-201ENST00000562710 SBNO2Q9Y2G9 1366 aa28.32■■■□□ 2.12
LINC00565-201ENST00000562710 NRXN1Q9ULB1 1477 aa28.32■■■□□ 2.12
LINC00565-201ENST00000562710 BCAR3O75815 825 aa28.3■■■□□ 2.12
LINC00565-201ENST00000562710 C8orf34Q49A92 452 aa28.3■■■□□ 2.12
LINC00565-201ENST00000562710 PPRC1Q5VV67 1664 aaKnown RBP28.29■■■□□ 2.12
LINC00565-201ENST00000562710 POLR3AO14802 1390 aaPredicted RBP28.28■■■□□ 2.12
LINC00565-201ENST00000562710 DMRT2Q9Y5R5 561 aa28.27■■■□□ 2.12
LINC00565-201ENST00000562710 KIDINS220Q9ULH0 1771 aa28.26■■■□□ 2.11
LINC00565-201ENST00000562710 LMTK2Q8IWU2 1503 aa28.25■■■□□ 2.11
LINC00565-201ENST00000562710 SETBP1Q9Y6X0 1596 aa28.25■■■□□ 2.11
LINC00565-201ENST00000562710 CENPJQ9HC77 1338 aaPredicted RBP28.24■■■□□ 2.11
LINC00565-201ENST00000562710 NOS1P29475 1434 aa28.23■■■□□ 2.11
LINC00565-201ENST00000562710 RGS3P49796 1198 aa28.23■■■□□ 2.11
LINC00565-201ENST00000562710 ADGRB3O60242 1522 aa28.22■■■□□ 2.11
LINC00565-201ENST00000562710 WWC1Q8IX03 1113 aa28.21■■■□□ 2.11
LINC00565-201ENST00000562710 PDE3AQ14432 1141 aa28.2■■■□□ 2.1
LINC00565-201ENST00000562710 SHPRHQ149N8 1683 aa28.19■■■□□ 2.1
LINC00565-201ENST00000562710 NSD3Q9BZ95 1437 aa28.19■■■□□ 2.1
LINC00565-201ENST00000562710 CGNL1Q0VF96 1302 aa28.18■■■□□ 2.1
LINC00565-201ENST00000562710 ZC3H13Q5T200 1668 aaKnown RBP28.18■■■□□ 2.1
LINC00565-201ENST00000562710 NINLQ9Y2I6 1382 aa28.18■■■□□ 2.1
LINC00565-201ENST00000562710 DAXXQ9UER7 740 aaPredicted RBP28.18■■■□□ 2.1
LINC00565-201ENST00000562710 SLC4A3P48751 1232 aa28.17■■■□□ 2.1
LINC00565-201ENST00000562710 MORC1Q86VD1 984 aa28.17■■■□□ 2.1
LINC00565-201ENST00000562710 ASXL2Q76L83 1435 aa28.16■■■□□ 2.1
LINC00565-201ENST00000562710 QRICH2Q9H0J4 1663 aa28.16■■■□□ 2.1
LINC00565-201ENST00000562710 TRAK1Q9UPV9 953 aa28.15■■■□□ 2.1
LINC00565-201ENST00000562710 PPLO60437 1756 aa28.15■■■□□ 2.1
LINC00565-201ENST00000562710 IGHDP01880 384 aa28.15■■■□□ 2.1
LINC00565-201ENST00000562710 CHGAP10645 457 aaKnown RBP28.15■■■□□ 2.1
LINC00565-201ENST00000562710 ZNF518AQ6AHZ1 1483 aa28.15■■■□□ 2.1
LINC00565-201ENST00000562710 C14orf93Q9H972 538 aaKnown RBP28.14■■■□□ 2.09
LINC00565-201ENST00000562710 SLC12A5Q9H2X9 1139 aa28.13■■■□□ 2.09
LINC00565-201ENST00000562710 ADGRB1O14514 1584 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms