RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 FAM205CA6NFA0 338 aa10.3□□□□□ -0.76
CFDP1-202ENST00000562602 HOXB1P14653 301 aaPredicted RBP10.3□□□□□ -0.76
CFDP1-202ENST00000562602 HS3ST6Q96QI5 342 aa10.3□□□□□ -0.76
CFDP1-202ENST00000562602 WASHC2AQ641Q2 1341 aa10.3□□□□□ -0.76
CFDP1-202ENST00000562602 DENND4BO75064 1496 aaPredicted RBP10.3□□□□□ -0.76
CFDP1-202ENST00000562602 RSPH4AQ5TD94 716 aa10.29□□□□□ -0.76
CFDP1-202ENST00000562602 HIRIP3Q9BW71 556 aaPredicted RBP10.29□□□□□ -0.76
CFDP1-202ENST00000562602 SHANK2Q9UPX8 1470 aa10.29□□□□□ -0.76
CFDP1-202ENST00000562602 ADCY10Q96PN6 1610 aa10.29□□□□□ -0.76
CFDP1-202ENST00000562602 CCDC7Q96M83 1385 aa10.28□□□□□ -0.76
CFDP1-202ENST00000562602 NUP160Q12769 1436 aa10.28□□□□□ -0.76
CFDP1-202ENST00000562602 PLEKHD1A6NEE1 506 aa10.28□□□□□ -0.76
CFDP1-202ENST00000562602 TSHZ2Q9NRE2 1034 aa10.28□□□□□ -0.76
CFDP1-202ENST00000562602 EIF4G3O43432 1585 aaKnown RBP10.27□□□□□ -0.76
CFDP1-202ENST00000562602 KIAA1107Q9UPP5 1409 aa10.27□□□□□ -0.77
CFDP1-202ENST00000562602 DOK7Q18PE1 504 aa10.27□□□□□ -0.77
CFDP1-202ENST00000562602 KRTAP3-3Q9BYR6 98 aa10.27□□□□□ -0.77
CFDP1-202ENST00000562602 KRTAP3-2Q9BYR7 98 aa10.27□□□□□ -0.77
CFDP1-202ENST00000562602 CAMSAP2Q08AD1 1489 aa10.27□□□□□ -0.77
CFDP1-202ENST00000562602 GPATCH8Q9UKJ3 1502 aaKnown RBP10.27□□□□□ -0.77
CFDP1-202ENST00000562602 ROCK2O75116 1388 aaKnown RBP10.26□□□□□ -0.77
CFDP1-202ENST00000562602 TEX14Q8IWB6 1497 aa10.26□□□□□ -0.77
CFDP1-202ENST00000562602 SPNS2Q8IVW8 549 aa10.26□□□□□ -0.77
CFDP1-202ENST00000562602 JPH4Q96JJ6 628 aa10.26□□□□□ -0.77
CFDP1-202ENST00000562602 SPATA31E1Q6ZUB1 1445 aa10.25□□□□□ -0.77
CFDP1-202ENST00000562602 ADGBQ8N7X0 1667 aa10.25□□□□□ -0.77
CFDP1-202ENST00000562602 KIF3CO14782 793 aa10.24□□□□□ -0.77
CFDP1-202ENST00000562602 PPP1R37O75864 691 aa10.24□□□□□ -0.77
CFDP1-202ENST00000562602 TSPY4P0CV99 314 aa10.24□□□□□ -0.77
CFDP1-202ENST00000562602 TSPY10P0CW01 314 aa10.24□□□□□ -0.77
CFDP1-202ENST00000562602 HNRNPUQ00839 825 aaKnown RBP eCLIP10.24□□□□□ -0.77
CFDP1-202ENST00000562602 GPR153Q6NV75 609 aa10.24□□□□□ -0.77
CFDP1-202ENST00000562602 ZNF710Q8N1W2 664 aa10.24□□□□□ -0.77
CFDP1-202ENST00000562602 PRKRIP1Q9H875 184 aaPredicted RBP10.24□□□□□ -0.77
CFDP1-202ENST00000562602 KDM6BO15054 1643 aa10.24□□□□□ -0.77
CFDP1-202ENST00000562602 PRG4Q92954 1404 aaPredicted RBP10.24□□□□□ -0.77
CFDP1-202ENST00000562602 KTN1Q86UP2 1357 aaKnown RBP10.23□□□□□ -0.77
CFDP1-202ENST00000562602 PZPP20742 1482 aa10.23□□□□□ -0.77
CFDP1-202ENST00000562602 ZBED9Q6R2W3 1325 aa10.22□□□□□ -0.77
CFDP1-202ENST00000562602 UHRF1BP1Q6BDS2 1440 aa10.22□□□□□ -0.77
CFDP1-202ENST00000562602 ANKRD50Q9ULJ7 1429 aa10.22□□□□□ -0.77
CFDP1-202ENST00000562602 ARHGEF12Q9NZN5 1544 aa10.22□□□□□ -0.77
CFDP1-202ENST00000562602 ZNF644Q9H582 1327 aaPredicted RBP10.21□□□□□ -0.78
CFDP1-202ENST00000562602 KDM5DQ9BY66 1539 aa10.21□□□□□ -0.78
CFDP1-202ENST00000562602 CEP170Q5SW79 1584 aa10.21□□□□□ -0.78
CFDP1-202ENST00000562602 RIMBP3CA6NJZ7 1639 aa10.21□□□□□ -0.78
CFDP1-202ENST00000562602 RIMBP3BA6NNM3 1639 aa10.21□□□□□ -0.78
CFDP1-202ENST00000562602 KIF14Q15058 1648 aa10.21□□□□□ -0.78
CFDP1-202ENST00000562602 RIMBP3Q9UFD9 1639 aa10.21□□□□□ -0.78
CFDP1-202ENST00000562602 ABCA8O94911 1581 aa10.2□□□□□ -0.78
CFDP1-202ENST00000562602 MMRN1Q13201 1228 aa10.2□□□□□ -0.78
CFDP1-202ENST00000562602 NBPF8Q3BBV2 869 aa10.2□□□□□ -0.78
CFDP1-202ENST00000562602 PLB1Q6P1J6 1458 aa10.2□□□□□ -0.78
CFDP1-202ENST00000562602 MBD5Q9P267 1494 aa10.2□□□□□ -0.78
CFDP1-202ENST00000562602 CROCC2H7BZ55 1655 aa10.19□□□□□ -0.78
CFDP1-202ENST00000562602 ABCC10Q5T3U5 1492 aa10.19□□□□□ -0.78
CFDP1-202ENST00000562602 KIF7Q2M1P5 1343 aa10.19□□□□□ -0.78
CFDP1-202ENST00000562602 C2orf72A6NCS6 295 aa10.19□□□□□ -0.78
CFDP1-202ENST00000562602 ARID3CA6NKF2 412 aa10.19□□□□□ -0.78
CFDP1-202ENST00000562602 BCANQ96GW7 911 aa10.19□□□□□ -0.78
CFDP1-202ENST00000562602 ZSWIM6Q9HCJ5 1215 aa10.19□□□□□ -0.78
CFDP1-202ENST00000562602 MRS2Q9HD23 443 aa10.19□□□□□ -0.78
CFDP1-202ENST00000562602 PPP4R2Q9NY27 417 aa10.19□□□□□ -0.78
CFDP1-202ENST00000562602 ARHGEF5Q12774 1597 aa10.18□□□□□ -0.78
CFDP1-202ENST00000562602 C9orf84Q5VXU9 1444 aa10.18□□□□□ -0.78
CFDP1-202ENST00000562602 POLR1AO95602 1720 aaPredicted RBP10.18□□□□□ -0.78
CFDP1-202ENST00000562602 NUP155O75694 1391 aa10.17□□□□□ -0.78
CFDP1-202ENST00000562602 HS6ST3Q8IZP7 471 aa10.17□□□□□ -0.78
CFDP1-202ENST00000562602 ZNF777Q9ULD5 760 aaPredicted RBP10.17□□□□□ -0.78
CFDP1-202ENST00000562602 ATP10BO94823 1461 aa10.17□□□□□ -0.78
CFDP1-202ENST00000562602 RALGAPBQ86X10 1494 aa10.17□□□□□ -0.78
CFDP1-202ENST00000562602 PTPRGP23470 1445 aa10.16□□□□□ -0.78
CFDP1-202ENST00000562602 USP47Q96K76 1375 aa10.16□□□□□ -0.78
CFDP1-202ENST00000562602 ERBB3P21860 1342 aa10.16□□□□□ -0.78
CFDP1-202ENST00000562602 RIMBP2O15034 1052 aa10.16□□□□□ -0.78
CFDP1-202ENST00000562602 ARSIQ5FYB1 569 aa10.16□□□□□ -0.78
CFDP1-202ENST00000562602 KHSRPQ92945 711 aaKnown RBP eCLIP10.16□□□□□ -0.78
CFDP1-202ENST00000562602 PLEKHH2Q8IVE3 1493 aa10.16□□□□□ -0.78
CFDP1-202ENST00000562602 ANP32EQ9BTT0 268 aa10.15□□□□□ -0.78
CFDP1-202ENST00000562602 C11orf95C9JLR9 678 aaPredicted RBP10.14□□□□□ -0.79
CFDP1-202ENST00000562602 RALBP1Q15311 655 aa10.14□□□□□ -0.79
CFDP1-202ENST00000562602 VARS2Q5ST30 1063 aaKnown RBP10.14□□□□□ -0.79
CFDP1-202ENST00000562602 CYB5RLQ6IPT4 315 aa10.14□□□□□ -0.79
CFDP1-202ENST00000562602 CCDC141Q6ZP82 1450 aa10.14□□□□□ -0.79
CFDP1-202ENST00000562602 KIF15Q9NS87 1388 aa10.14□□□□□ -0.79
CFDP1-202ENST00000562602 WASHC2CQ9Y4E1 1318 aa10.12□□□□□ -0.79
CFDP1-202ENST00000562602 NKX1-1Q15270 411 aaPredicted RBP10.12□□□□□ -0.79
CFDP1-202ENST00000562602 FAM9BQ8IZU0 186 aa10.12□□□□□ -0.79
CFDP1-202ENST00000562602 STAC3Q96MF2 364 aa10.12□□□□□ -0.79
CFDP1-202ENST00000562602 CARD11Q9BXL7 1154 aa10.12□□□□□ -0.79
CFDP1-202ENST00000562602 RBM19Q9Y4C8 960 aaKnown RBP10.12□□□□□ -0.79
CFDP1-202ENST00000562602 SMG6Q86US8 1419 aaKnown RBP10.12□□□□□ -0.79
CFDP1-202ENST00000562602 CHD1O14646 1710 aa10.12□□□□□ -0.79
CFDP1-202ENST00000562602 FANCIQ9NVI1 1328 aa10.11□□□□□ -0.79
CFDP1-202ENST00000562602 DHX29Q7Z478 1369 aaKnown RBP10.11□□□□□ -0.79
CFDP1-202ENST00000562602 CDC42BPAQ5VT25 1732 aa10.1□□□□□ -0.79
CFDP1-202ENST00000562602 MAST1Q9Y2H9 1570 aa10.1□□□□□ -0.79
CFDP1-202ENST00000562602 CHGAP10645 457 aaKnown RBP10.1□□□□□ -0.79
CFDP1-202ENST00000562602 BRD4O60885 1362 aaPredicted RBP10.1□□□□□ -0.79
CFDP1-202ENST00000562602 INSRP06213 1382 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms