RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 PRR20DP86480 221 aa9.57□□□□□ -0.88
DENND4A-205ENST00000562540 PRR20BP86481 221 aa9.57□□□□□ -0.88
DENND4A-205ENST00000562540 PRR20AP86496 221 aa9.57□□□□□ -0.88
DENND4A-205ENST00000562540 LCE2AQ5TA79 106 aaPredicted RBP9.57□□□□□ -0.88
DENND4A-205ENST00000562540 TTC13Q8NBP0 860 aa9.57□□□□□ -0.88
DENND4A-205ENST00000562540 TLL1O43897 1013 aa9.56□□□□□ -0.88
DENND4A-205ENST00000562540 OSBPP22059 807 aa9.56□□□□□ -0.88
DENND4A-205ENST00000562540 BLOC1S3Q6QNY0 202 aa9.56□□□□□ -0.88
DENND4A-205ENST00000562540 ZNF598Q86UK7 904 aaKnown RBP9.56□□□□□ -0.88
DENND4A-205ENST00000562540 PADI6Q6TGC4 694 aa9.55□□□□□ -0.88
DENND4A-205ENST00000562540 TREML4Q6UXN2 200 aa9.55□□□□□ -0.88
DENND4A-205ENST00000562540 PCDHB3Q9Y5E6 796 aa9.55□□□□□ -0.88
DENND4A-205ENST00000562540 FAM187AA6NFU0 413 aa9.54□□□□□ -0.88
DENND4A-205ENST00000562540 PPEF1O14829 653 aaPredicted RBP9.54□□□□□ -0.88
DENND4A-205ENST00000562540 LIAT1Q6ZQX7 453 aa9.54□□□□□ -0.88
DENND4A-205ENST00000562540 TNFRSF10AO00220 468 aa9.53□□□□□ -0.88
DENND4A-205ENST00000562540 ST8SIA5O15466 376 aa9.52□□□□□ -0.89
DENND4A-205ENST00000562540 GDF9O60383 454 aa9.52□□□□□ -0.89
DENND4A-205ENST00000562540 ZNF697Q5TEC3 545 aa9.52□□□□□ -0.89
DENND4A-205ENST00000562540 ANKLE1Q8NAG6 615 aa9.52□□□□□ -0.89
DENND4A-205ENST00000562540 NPDC1Q9NQX5 325 aaPredicted RBP9.52□□□□□ -0.89
DENND4A-205ENST00000562540 S1PR4O95977 384 aa9.5□□□□□ -0.89
DENND4A-205ENST00000562540 EYA1Q99502 592 aa9.5□□□□□ -0.89
DENND4A-205ENST00000562540 AAASQ9NRG9 546 aa9.5□□□□□ -0.89
DENND4A-205ENST00000562540 PRR14Q9BWN1 585 aa9.49□□□□□ -0.89
DENND4A-205ENST00000562540 SLC4A3P48751 1232 aa9.46□□□□□ -0.9
DENND4A-205ENST00000562540 PLA2G2CQ5R387 149 aa9.46□□□□□ -0.9
DENND4A-205ENST00000562540 ACTN4O43707 911 aaKnown RBP9.42□□□□□ -0.9
DENND4A-205ENST00000562540 ARHGEF1Q92888 912 aaKnown RBP9.42□□□□□ -0.9
DENND4A-205ENST00000562540 TSHZ2Q9NRE2 1034 aa9.42□□□□□ -0.9
DENND4A-205ENST00000562540 DACH1Q9UI36 760 aa9.42□□□□□ -0.9
DENND4A-205ENST00000562540 MLLT3P42568 568 aaPredicted RBP9.41□□□□□ -0.9
DENND4A-205ENST00000562540 PKD2L1Q9P0L9 805 aa9.41□□□□□ -0.9
DENND4A-205ENST00000562540 ADH1BP00325 375 aa9.4□□□□□ -0.9
DENND4A-205ENST00000562540 KCNV2Q8TDN2 545 aa9.4□□□□□ -0.9
DENND4A-205ENST00000562540 WFS1O76024 890 aa9.39□□□□□ -0.91
DENND4A-205ENST00000562540 CFHP08603 1231 aa9.38□□□□□ -0.91
DENND4A-205ENST00000562540 DNAJB2P25686 324 aa9.38□□□□□ -0.91
DENND4A-205ENST00000562540 FOXC1Q12948 553 aa9.38□□□□□ -0.91
DENND4A-205ENST00000562540 CRIPAKQ8N1N5 446 aa9.38□□□□□ -0.91
DENND4A-205ENST00000562540 KMT5BQ4FZB7 885 aa9.37□□□□□ -0.91
DENND4A-205ENST00000562540 SLC6A16Q9GZN6 736 aa9.37□□□□□ -0.91
DENND4A-205ENST00000562540 TMEM134Q9H6X4 195 aa9.37□□□□□ -0.91
DENND4A-205ENST00000562540 GMPR2Q9P2T1 348 aaKnown RBP9.37□□□□□ -0.91
DENND4A-205ENST00000562540 NFX1Q12986 1120 aaKnown RBP9.35□□□□□ -0.91
DENND4A-205ENST00000562540 PTGDRQ13258 359 aa9.35□□□□□ -0.91
DENND4A-205ENST00000562540 STK17AQ9UEE5 414 aa9.35□□□□□ -0.91
DENND4A-205ENST00000562540 AVPP01185 164 aa9.33□□□□□ -0.92
DENND4A-205ENST00000562540 SLC10A3P09131 477 aa9.33□□□□□ -0.92
DENND4A-205ENST00000562540 RBM46Q8TBY0 533 aaKnown RBP9.33□□□□□ -0.92
DENND4A-205ENST00000562540 NUTM2FA1L443 756 aa9.32□□□□□ -0.92
DENND4A-205ENST00000562540 C11orf95C9JLR9 678 aaPredicted RBP9.32□□□□□ -0.92
DENND4A-205ENST00000562540 WIPF1O43516 503 aa9.32□□□□□ -0.92
DENND4A-205ENST00000562540 NR1I2O75469 434 aa9.32□□□□□ -0.92
DENND4A-205ENST00000562540 LMOD2Q6P5Q4 547 aa9.32□□□□□ -0.92
DENND4A-205ENST00000562540 TOR4AQ9NXH8 423 aa9.32□□□□□ -0.92
DENND4A-205ENST00000562540 RCCD1A6NED2 376 aa9.31□□□□□ -0.92
DENND4A-205ENST00000562540 LCE2CQ5TA81 110 aa9.31□□□□□ -0.92
DENND4A-205ENST00000562540 P3H3Q8IVL6 736 aa9.31□□□□□ -0.92
DENND4A-205ENST00000562540 ADGRG1Q9Y653 693 aa9.31□□□□□ -0.92
DENND4A-205ENST00000562540 AXIN1O15169 862 aa9.3□□□□□ -0.92
DENND4A-205ENST00000562540 FAM161AQ3B820 660 aa9.3□□□□□ -0.92
DENND4A-205ENST00000562540 SCUBE3Q8IX30 993 aa9.3□□□□□ -0.92
DENND4A-205ENST00000562540 PUS10Q3MIT2 529 aaKnown RBP9.28□□□□□ -0.92
DENND4A-205ENST00000562540 SPSB2Q99619 263 aa9.27□□□□□ -0.93
DENND4A-205ENST00000562540 FCHSD2O94868 740 aa9.26□□□□□ -0.93
DENND4A-205ENST00000562540 RPIAP49247 311 aa9.26□□□□□ -0.93
DENND4A-205ENST00000562540 INSM1Q01101 510 aaPredicted RBP9.26□□□□□ -0.93
DENND4A-205ENST00000562540 CTC1Q2NKJ3 1217 aa9.26□□□□□ -0.93
DENND4A-205ENST00000562540 CYP4X1Q8N118 509 aa9.26□□□□□ -0.93
DENND4A-205ENST00000562540 SMCPP49901 116 aaPredicted RBP9.25□□□□□ -0.93
DENND4A-205ENST00000562540 SEMA3EO15041 775 aa9.24□□□□□ -0.93
DENND4A-205ENST00000562540 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.23□□□□□ -0.93
DENND4A-205ENST00000562540 FCF1Q9Y324 198 aaKnown RBP9.23□□□□□ -0.93
DENND4A-205ENST00000562540 SNRPBP14678 240 aaKnown RBP9.21□□□□□ -0.94
DENND4A-205ENST00000562540 CD2BP2O95400 341 aaKnown RBP9.2□□□□□ -0.94
DENND4A-205ENST00000562540 TERTO14746 1132 aaKnown RBP9.19□□□□□ -0.94
DENND4A-205ENST00000562540 OATP04181 439 aa9.19□□□□□ -0.94
DENND4A-205ENST00000562540 PXYLP1Q8TE99 480 aa9.19□□□□□ -0.94
DENND4A-205ENST00000562540 ATP13A2Q9NQ11 1180 aa9.19□□□□□ -0.94
DENND4A-205ENST00000562540 THAP11Q96EK4 314 aa9.18□□□□□ -0.94
DENND4A-205ENST00000562540 TTC24A2A3L6 582 aaPredicted RBP9.17□□□□□ -0.94
DENND4A-205ENST00000562540 SMPD1P17405 629 aa9.17□□□□□ -0.94
DENND4A-205ENST00000562540 HIC1Q14526 733 aa9.17□□□□□ -0.94
DENND4A-205ENST00000562540 FAM160A2Q8N612 972 aaPredicted RBP9.17□□□□□ -0.94
DENND4A-205ENST00000562540 PRDM9Q9NQV7 894 aa9.17□□□□□ -0.94
DENND4A-205ENST00000562540 LOC100996750A0A140TA64 210 aa9.16□□□□□ -0.94
DENND4A-205ENST00000562540 RSPH4AQ5TD94 716 aa9.16□□□□□ -0.94
DENND4A-205ENST00000562540 KRTAP4-6Q9BYQ5 205 aa9.16□□□□□ -0.94
DENND4A-205ENST00000562540 MORN1Q5T089 497 aa9.15□□□□□ -0.94
DENND4A-205ENST00000562540 RBM26Q5T8P6 1007 aaKnown RBP9.15□□□□□ -0.94
DENND4A-205ENST00000562540 METTL3Q86U44 580 aaKnown RBP9.15□□□□□ -0.94
DENND4A-205ENST00000562540 TRIM47Q96LD4 638 aa9.15□□□□□ -0.94
DENND4A-205ENST00000562540 TESPA1A2RU30 521 aaPredicted RBP9.14□□□□□ -0.95
DENND4A-205ENST00000562540 SMYD5Q6GMV2 418 aa9.14□□□□□ -0.95
DENND4A-205ENST00000562540 FUT2Q10981 343 aa9.12□□□□□ -0.95
DENND4A-205ENST00000562540 J3QL48 77 aa9.11□□□□□ -0.95
DENND4A-205ENST00000562540 WNT7AO00755 349 aa9.11□□□□□ -0.95
DENND4A-205ENST00000562540 GNPATO15228 680 aa9.11□□□□□ -0.95
DENND4A-205ENST00000562540 RDH13Q8NBN7 331 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms