RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 CDCA7LQ96GN5 454 aa10.62□□□□□ -0.71
UBR1-203ENST00000562173 AK7Q96M32 723 aa10.62□□□□□ -0.71
UBR1-203ENST00000562173 RABGEF1Q9UJ41 708 aa10.62□□□□□ -0.71
UBR1-203ENST00000562173 TRIM6-TRIM34B2RNG4 842 aa10.61□□□□□ -0.71
UBR1-203ENST00000562173 MRPL50Q8N5N7 158 aaKnown RBP10.61□□□□□ -0.71
UBR1-203ENST00000562173 KRI1Q8N9T8 703 aaKnown RBP10.61□□□□□ -0.71
UBR1-203ENST00000562173 NBPF3Q9H094 633 aa10.61□□□□□ -0.71
UBR1-203ENST00000562173 IRF6O14896 467 aa10.6□□□□□ -0.71
UBR1-203ENST00000562173 CCDC102AQ96A19 550 aa10.6□□□□□ -0.71
UBR1-203ENST00000562173 NBPF26B4DH59 902 aa10.59□□□□□ -0.71
UBR1-203ENST00000562173 CYB5RLQ6IPT4 315 aa10.59□□□□□ -0.71
UBR1-203ENST00000562173 SLC24A3Q9HC58 644 aa10.59□□□□□ -0.71
UBR1-203ENST00000562173 ARAP1Q96P48 1450 aa10.59□□□□□ -0.71
UBR1-203ENST00000562173 FECHP22830 423 aa10.58□□□□□ -0.72
UBR1-203ENST00000562173 KIAA1468Q9P260 1216 aa10.58□□□□□ -0.72
UBR1-203ENST00000562173 OATP04181 439 aa10.57□□□□□ -0.72
UBR1-203ENST00000562173 THSD4Q6ZMP0 1018 aa10.57□□□□□ -0.72
UBR1-203ENST00000562173 PACS2Q86VP3 889 aa10.57□□□□□ -0.72
UBR1-203ENST00000562173 ADGRG1Q9Y653 693 aa10.57□□□□□ -0.72
UBR1-203ENST00000562173 EIF4G3O43432 1585 aaKnown RBP10.56□□□□□ -0.72
UBR1-203ENST00000562173 PRDM2Q13029 1718 aa10.56□□□□□ -0.72
UBR1-203ENST00000562173 WNT2BQ93097 391 aa10.56□□□□□ -0.72
UBR1-203ENST00000562173 CFTRP13569 1480 aa10.55□□□□□ -0.72
UBR1-203ENST00000562173 AMHR2Q16671 573 aa10.55□□□□□ -0.72
UBR1-203ENST00000562173 TSKSQ9UJT2 592 aa10.55□□□□□ -0.72
UBR1-203ENST00000562173 GOLGA8CPA6NN73 597 aa10.54□□□□□ -0.72
UBR1-203ENST00000562173 PTPN5P54829 565 aa10.54□□□□□ -0.72
UBR1-203ENST00000562173 RBM46Q8TBY0 533 aaKnown RBP10.54□□□□□ -0.72
UBR1-203ENST00000562173 METTL3Q86U44 580 aaKnown RBP10.53□□□□□ -0.72
UBR1-203ENST00000562173 LAPTM4BQ86VI4 370 aa10.53□□□□□ -0.72
UBR1-203ENST00000562173 SEPT9Q9UHD8 586 aaPredicted RBP10.53□□□□□ -0.72
UBR1-203ENST00000562173 TRIM66O15016 1216 aa10.52□□□□□ -0.73
UBR1-203ENST00000562173 PXYLP1Q8TE99 480 aa10.52□□□□□ -0.73
UBR1-203ENST00000562173 FAM198AQ9UFP1 575 aa10.52□□□□□ -0.73
UBR1-203ENST00000562173 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.5□□□□□ -0.73
UBR1-203ENST00000562173 PLA2G2EQ9NZK7 142 aa10.5□□□□□ -0.73
UBR1-203ENST00000562173 AQRO60306 1485 aaKnown RBP eCLIP10.49□□□□□ -0.73
UBR1-203ENST00000562173 C3orf80F5H4A9 247 aa10.49□□□□□ -0.73
UBR1-203ENST00000562173 ANKK1Q8NFD2 765 aa10.49□□□□□ -0.73
UBR1-203ENST00000562173 TATDN2Q93075 761 aa10.49□□□□□ -0.73
UBR1-203ENST00000562173 ZFRQ96KR1 1074 aaKnown RBP10.49□□□□□ -0.73
UBR1-203ENST00000562173 EYA1Q99502 592 aa10.49□□□□□ -0.73
UBR1-203ENST00000562173 TOPBP1Q92547 1522 aa10.48□□□□□ -0.73
UBR1-203ENST00000562173 FAM98CQ17RN3 349 aaKnown RBP10.48□□□□□ -0.73
UBR1-203ENST00000562173 PNMA3Q9UL41 463 aa10.48□□□□□ -0.73
UBR1-203ENST00000562173 TOP2AP11388 1531 aaKnown RBP10.48□□□□□ -0.73
UBR1-203ENST00000562173 DNAJB2P25686 324 aa10.47□□□□□ -0.73
UBR1-203ENST00000562173 BCAMP50895 628 aa10.47□□□□□ -0.73
UBR1-203ENST00000562173 PDE4DQ08499 809 aa10.47□□□□□ -0.73
UBR1-203ENST00000562173 NUDT18Q6ZVK8 323 aa10.47□□□□□ -0.73
UBR1-203ENST00000562173 SOWAHBA6NEL2 793 aa10.46□□□□□ -0.73
UBR1-203ENST00000562173 CLCN1P35523 988 aa10.46□□□□□ -0.73
UBR1-203ENST00000562173 RSF1Q96T23 1441 aaPredicted RBP10.46□□□□□ -0.74
UBR1-203ENST00000562173 TARBP1Q13395 1621 aaKnown RBP10.46□□□□□ -0.74
UBR1-203ENST00000562173 BRPF1P55201 1214 aaPredicted RBP10.44□□□□□ -0.74
UBR1-203ENST00000562173 FAM161AQ3B820 660 aa10.44□□□□□ -0.74
UBR1-203ENST00000562173 IFT140Q96RY7 1462 aa10.43□□□□□ -0.74
UBR1-203ENST00000562173 RCCD1A6NED2 376 aa10.43□□□□□ -0.74
UBR1-203ENST00000562173 SMAPO00193 183 aa10.43□□□□□ -0.74
UBR1-203ENST00000562173 TTLL12Q14166 644 aaPredicted RBP10.43□□□□□ -0.74
UBR1-203ENST00000562173 PARP9Q8IXQ6 854 aa10.43□□□□□ -0.74
UBR1-203ENST00000562173 PHOX2BQ99453 314 aa10.43□□□□□ -0.74
UBR1-203ENST00000562173 TMEM134Q9H6X4 195 aa10.43□□□□□ -0.74
UBR1-203ENST00000562173 GPCPD1Q9NPB8 672 aa10.43□□□□□ -0.74
UBR1-203ENST00000562173 RAD54L2Q9Y4B4 1467 aa10.42□□□□□ -0.74
UBR1-203ENST00000562173 NEUROD2Q15784 382 aa10.42□□□□□ -0.74
UBR1-203ENST00000562173 TMUB1Q9BVT8 246 aa10.42□□□□□ -0.74
UBR1-203ENST00000562173 DAXXQ9UER7 740 aaPredicted RBP10.42□□□□□ -0.74
UBR1-203ENST00000562173 CCDC88BA6NC98 1476 aa10.42□□□□□ -0.74
UBR1-203ENST00000562173 MDM2Q00987 491 aaPredicted RBP10.4□□□□□ -0.74
UBR1-203ENST00000562173 SLC4A3P48751 1232 aa10.39□□□□□ -0.75
UBR1-203ENST00000562173 GIGYF2Q6Y7W6 1299 aaKnown RBP10.39□□□□□ -0.75
UBR1-203ENST00000562173 WBP1LQ9NX94 342 aa10.39□□□□□ -0.75
UBR1-203ENST00000562173 ERCC6L2Q5T890 1561 aa10.39□□□□□ -0.75
UBR1-203ENST00000562173 SULF1Q8IWU6 871 aa10.38□□□□□ -0.75
UBR1-203ENST00000562173 LRCH3Q96II8 777 aa10.38□□□□□ -0.75
UBR1-203ENST00000562173 KDM4CQ9H3R0 1056 aa10.38□□□□□ -0.75
UBR1-203ENST00000562173 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.38□□□□□ -0.75
UBR1-203ENST00000562173 DNMBPQ6XZF7 1577 aa10.38□□□□□ -0.75
UBR1-203ENST00000562173 CLASP1Q7Z460 1538 aa10.38□□□□□ -0.75
UBR1-203ENST00000562173 HDGFP51858 240 aaKnown RBP10.36□□□□□ -0.75
UBR1-203ENST00000562173 SAMD7Q7Z3H4 446 aa10.36□□□□□ -0.75
UBR1-203ENST00000562173 NECTIN2Q92692 538 aa10.36□□□□□ -0.75
UBR1-203ENST00000562173 FAM217BQ9NTX9 383 aaPredicted RBP10.36□□□□□ -0.75
UBR1-203ENST00000562173 TDRD9Q8NDG6 1382 aaKnown RBP10.36□□□□□ -0.75
UBR1-203ENST00000562173 POLA1P09884 1462 aaPredicted RBP10.36□□□□□ -0.75
UBR1-203ENST00000562173 IFFO2Q5TF58 517 aa10.35□□□□□ -0.75
UBR1-203ENST00000562173 TSR3Q9UJK0 312 aaKnown RBP10.35□□□□□ -0.75
UBR1-203ENST00000562173 HPS5Q9UPZ3 1129 aa10.35□□□□□ -0.75
UBR1-203ENST00000562173 SNAPC4Q5SXM2 1469 aa10.35□□□□□ -0.75
UBR1-203ENST00000562173 SLF2Q8IX21 1173 aa10.34□□□□□ -0.75
UBR1-203ENST00000562173 DDRGK1Q96HY6 314 aa10.34□□□□□ -0.75
UBR1-203ENST00000562173 GPBP1L1Q9HC44 474 aaPredicted RBP10.34□□□□□ -0.75
UBR1-203ENST00000562173 NYAP1Q6ZVC0 841 aa10.33□□□□□ -0.76
UBR1-203ENST00000562173 ITGBL1O95965 494 aaPredicted RBP10.32□□□□□ -0.76
UBR1-203ENST00000562173 SWT1Q5T5J6 900 aaKnown RBP10.32□□□□□ -0.76
UBR1-203ENST00000562173 RSPH4AQ5TD94 716 aa10.32□□□□□ -0.76
UBR1-203ENST00000562173 NLRP7Q8WX94 980 aa10.32□□□□□ -0.76
UBR1-203ENST00000562173 REPIN1Q9BWE0 567 aaKnown RBP10.32□□□□□ -0.76
UBR1-203ENST00000562173 KIF13AQ9H1H9 1805 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms