RNA–Protein interactions for RNA: ENST00000562075.6

CNN2-204, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-204ENST00000562075 NEXMIFQ5QGS0 1516 aa20.12■□□□□ 0.81
CNN2-204ENST00000562075 GPRASP1Q5JY77 1395 aa20.11■□□□□ 0.81
CNN2-204ENST00000562075 STAG3Q9UJ98 1225 aa20.11■□□□□ 0.81
CNN2-204ENST00000562075 NRXN1Q9ULB1 1477 aa20.11■□□□□ 0.81
CNN2-204ENST00000562075 KIAA1210Q9ULL0 1709 aa20.1■□□□□ 0.81
CNN2-204ENST00000562075 ADGRF5Q8IZF2 1346 aa20.1■□□□□ 0.81
CNN2-204ENST00000562075 NBPF1Q3BBV0 1214 aa20.09■□□□□ 0.81
CNN2-204ENST00000562075 RIMS1Q86UR5 1692 aaKnown RBP20.07■□□□□ 0.8
CNN2-204ENST00000562075 A2ML1A8K2U0 1454 aa20.06■□□□□ 0.8
CNN2-204ENST00000562075 CEBPAP49715 358 aaPredicted RBP20.06■□□□□ 0.8
CNN2-204ENST00000562075 ADAMTSL3P82987 1691 aa20.06■□□□□ 0.8
CNN2-204ENST00000562075 VGFO15240 615 aaPredicted RBP20.05■□□□□ 0.8
CNN2-204ENST00000562075 PIK3C2GO75747 1445 aa20.04■□□□□ 0.8
CNN2-204ENST00000562075 ZFYVE9O95405 1425 aa20.04■□□□□ 0.8
CNN2-204ENST00000562075 NLRP1Q9C000 1473 aa20.04■□□□□ 0.8
CNN2-204ENST00000562075 PLPPR3Q6T4P5 718 aa20.03■□□□□ 0.8
CNN2-204ENST00000562075 KDM5AP29375 1690 aaKnown RBP20.03■□□□□ 0.8
CNN2-204ENST00000562075 CFAP70Q5T0N1 1121 aa20.02■□□□□ 0.8
CNN2-204ENST00000562075 NUTM2DQ5VT03 806 aaPredicted RBP20.02■□□□□ 0.8
CNN2-204ENST00000562075 IQGAP1P46940 1657 aa20.01■□□□□ 0.79
CNN2-204ENST00000562075 RIMS2Q9UQ26 1411 aa20■□□□□ 0.79
CNN2-204ENST00000562075 SCAF11Q99590 1463 aaKnown RBP19.99■□□□□ 0.79
CNN2-204ENST00000562075 POLR1AO95602 1720 aaPredicted RBP19.99■□□□□ 0.79
CNN2-204ENST00000562075 UBR1Q8IWV7 1749 aa19.99■□□□□ 0.79
CNN2-204ENST00000562075 SETBP1Q9Y6X0 1596 aa19.99■□□□□ 0.79
CNN2-204ENST00000562075 ST20-MTHFSA0A0A6YYL1 179 aa19.98■□□□□ 0.79
CNN2-204ENST00000562075 C14orf93Q9H972 538 aaKnown RBP19.98■□□□□ 0.79
CNN2-204ENST00000562075 CCDC7Q96M83 1385 aa19.97■□□□□ 0.79
CNN2-204ENST00000562075 DDX10Q13206 875 aaKnown RBP19.97■□□□□ 0.79
CNN2-204ENST00000562075 WASHC2AQ641Q2 1341 aa19.97■□□□□ 0.79
CNN2-204ENST00000562075 MYO3AQ8NEV4 1616 aa19.96■□□□□ 0.79
CNN2-204ENST00000562075 EIF3AQ14152 1382 aaKnown RBP19.95■□□□□ 0.79
CNN2-204ENST00000562075 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.95■□□□□ 0.78
CNN2-204ENST00000562075 C11orf95C9JLR9 678 aaPredicted RBP19.94■□□□□ 0.78
CNN2-204ENST00000562075 ADGRB1O14514 1584 aa19.93■□□□□ 0.78
CNN2-204ENST00000562075 HDGFP51858 240 aaKnown RBP19.93■□□□□ 0.78
CNN2-204ENST00000562075 KIF7Q2M1P5 1343 aa19.93■□□□□ 0.78
CNN2-204ENST00000562075 TMEM2Q9UHN6 1383 aa19.92■□□□□ 0.78
CNN2-204ENST00000562075 ALKQ9UM73 1620 aa19.88■□□□□ 0.77
CNN2-204ENST00000562075 CEP170BQ9Y4F5 1589 aaPredicted RBP19.88■□□□□ 0.77
CNN2-204ENST00000562075 TMEM132EQ6IEE7 984 aa19.88■□□□□ 0.77
CNN2-204ENST00000562075 SENP3Q9H4L4 574 aaPredicted RBP19.88■□□□□ 0.77
CNN2-204ENST00000562075 TESK2Q96S53 571 aa19.87■□□□□ 0.77
CNN2-204ENST00000562075 ASXL1Q8IXJ9 1541 aa19.86■□□□□ 0.77
CNN2-204ENST00000562075 PTPRMP28827 1452 aa19.86■□□□□ 0.77
CNN2-204ENST00000562075 POLR3GLQ9BT43 218 aa19.86■□□□□ 0.77
CNN2-204ENST00000562075 SLIT1O75093 1534 aa19.86■□□□□ 0.77
CNN2-204ENST00000562075 ZNF142P52746 1687 aaPredicted RBP19.85■□□□□ 0.77
CNN2-204ENST00000562075 MIER1Q8N108 512 aa19.85■□□□□ 0.77
CNN2-204ENST00000562075 THEMISQ8N1K5 641 aaPredicted RBP19.85■□□□□ 0.77
CNN2-204ENST00000562075 ARHGAP23Q9P227 1491 aa19.85■□□□□ 0.77
CNN2-204ENST00000562075 TMF1P82094 1093 aa19.84■□□□□ 0.77
CNN2-204ENST00000562075 NRXN3Q9Y4C0 1643 aa19.84■□□□□ 0.77
CNN2-204ENST00000562075 TRAK1Q9UPV9 953 aa19.83■□□□□ 0.77
CNN2-204ENST00000562075 EID1Q9Y6B2 187 aa19.83■□□□□ 0.77
CNN2-204ENST00000562075 DISP3Q9P2K9 1392 aa19.83■□□□□ 0.76
CNN2-204ENST00000562075 SETD1AO15047 1707 aaKnown RBP19.82■□□□□ 0.76
CNN2-204ENST00000562075 ARHGEF28Q8N1W1 1705 aaKnown RBP19.82■□□□□ 0.76
CNN2-204ENST00000562075 CENPJQ9HC77 1338 aaPredicted RBP19.81■□□□□ 0.76
CNN2-204ENST00000562075 TXNDC2Q86VQ3 553 aa19.81■□□□□ 0.76
CNN2-204ENST00000562075 BCANQ96GW7 911 aa19.81■□□□□ 0.76
CNN2-204ENST00000562075 PLEKHG1Q9ULL1 1385 aa19.81■□□□□ 0.76
CNN2-204ENST00000562075 YTHDC2Q9H6S0 1430 aaKnown RBP19.8■□□□□ 0.76
CNN2-204ENST00000562075 QRICH2Q9H0J4 1663 aa19.8■□□□□ 0.76
CNN2-204ENST00000562075 SETD1BQ9UPS6 1966 aaKnown RBP19.79■□□□□ 0.76
CNN2-204ENST00000562075 SLC24A1O60721 1099 aa19.79■□□□□ 0.76
CNN2-204ENST00000562075 LTKP29376 864 aa19.79■□□□□ 0.76
CNN2-204ENST00000562075 STK26Q9P289 416 aa19.78■□□□□ 0.76
CNN2-204ENST00000562075 SBNO2Q9Y2G9 1366 aa19.78■□□□□ 0.76
CNN2-204ENST00000562075 CDCA8Q53HL2 280 aa19.77■□□□□ 0.76
CNN2-204ENST00000562075 LRPPRCP42704 1394 aaKnown RBP19.75■□□□□ 0.75
CNN2-204ENST00000562075 ANP32CO43423 234 aa19.75■□□□□ 0.75
CNN2-204ENST00000562075 ADAMTS13Q76LX8 1427 aa19.74■□□□□ 0.75
CNN2-204ENST00000562075 METP08581 1390 aa19.73■□□□□ 0.75
CNN2-204ENST00000562075 DLC1Q96QB1 1528 aa19.73■□□□□ 0.75
CNN2-204ENST00000562075 DIP2AQ14689 1571 aa19.71■□□□□ 0.75
CNN2-204ENST00000562075 KNDC1Q76NI1 1749 aa19.71■□□□□ 0.75
CNN2-204ENST00000562075 ABCC11Q96J66 1382 aa19.7■□□□□ 0.74
CNN2-204ENST00000562075 PRAM1Q96QH2 718 aa19.7■□□□□ 0.74
CNN2-204ENST00000562075 POGKQ9P215 609 aa19.7■□□□□ 0.74
CNN2-204ENST00000562075 MED14O60244 1454 aa19.7■□□□□ 0.74
CNN2-204ENST00000562075 ANKLE2Q86XL3 938 aa19.69■□□□□ 0.74
CNN2-204ENST00000562075 SAFB2Q14151 953 aaKnown RBP eCLIP19.68■□□□□ 0.74
CNN2-204ENST00000562075 SLC26A8Q96RN1 970 aa19.67■□□□□ 0.74
CNN2-204ENST00000562075 TECPR2O15040 1411 aa19.67■□□□□ 0.74
CNN2-204ENST00000562075 CPS1P31327 1500 aa19.66■□□□□ 0.74
CNN2-204ENST00000562075 TBX22Q9Y458 520 aa19.66■□□□□ 0.74
CNN2-204ENST00000562075 EVC2Q86UK5 1308 aa19.66■□□□□ 0.74
CNN2-204ENST00000562075 TULP4Q9NRJ4 1543 aa19.66■□□□□ 0.74
CNN2-204ENST00000562075 MYOM1P52179 1685 aa19.65■□□□□ 0.74
CNN2-204ENST00000562075 KDM4FA0A1W2PPD8 638 aa19.64■□□□□ 0.73
CNN2-204ENST00000562075 FAM135BQ49AJ0 1406 aa19.63■□□□□ 0.73
CNN2-204ENST00000562075 MINK1Q8N4C8 1332 aaPredicted RBP19.63■□□□□ 0.73
CNN2-204ENST00000562075 SIRT1Q96EB6 747 aa19.62■□□□□ 0.73
CNN2-204ENST00000562075 PLEKHH1Q9ULM0 1364 aa19.61■□□□□ 0.73
CNN2-204ENST00000562075 WAPLQ7Z5K2 1190 aa19.61■□□□□ 0.73
CNN2-204ENST00000562075 PUS7Q96PZ0 661 aaKnown RBP19.61■□□□□ 0.73
CNN2-204ENST00000562075 PANK3Q9H999 370 aa19.61■□□□□ 0.73
CNN2-204ENST00000562075 PTPRUQ92729 1446 aa19.6■□□□□ 0.73
CNN2-204ENST00000562075 NPHP4O75161 1426 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms