RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 IQSEC2Q5JU85 1478 aa14.25□□□□□ -0.13
NSMCE1-203ENST00000562039 TMEM131LA2VDJ0 1609 aa14.24□□□□□ -0.13
NSMCE1-203ENST00000562039 FOXD1Q16676 465 aa14.24□□□□□ -0.13
NSMCE1-203ENST00000562039 LRRC7Q96NW7 1537 aa14.24□□□□□ -0.13
NSMCE1-203ENST00000562039 ZNF326Q5BKZ1 582 aaKnown RBP14.23□□□□□ -0.13
NSMCE1-203ENST00000562039 HFM1A2PYH4 1435 aa14.23□□□□□ -0.13
NSMCE1-203ENST00000562039 SLC4A1APQ9BWU0 796 aaKnown RBP14.22□□□□□ -0.13
NSMCE1-203ENST00000562039 ZFYVE9O95405 1425 aa14.22□□□□□ -0.13
NSMCE1-203ENST00000562039 KDM5AP29375 1690 aaKnown RBP14.21□□□□□ -0.13
NSMCE1-203ENST00000562039 TOM1O60784 492 aa14.21□□□□□ -0.13
NSMCE1-203ENST00000562039 SPHKAPQ2M3C7 1700 aa14.21□□□□□ -0.14
NSMCE1-203ENST00000562039 PROSER2Q86WR7 435 aaPredicted RBP14.2□□□□□ -0.14
NSMCE1-203ENST00000562039 HSPA1LP34931 641 aa14.19□□□□□ -0.14
NSMCE1-203ENST00000562039 KCNA6P17658 529 aa14.18□□□□□ -0.14
NSMCE1-203ENST00000562039 HDGFP51858 240 aaKnown RBP14.18□□□□□ -0.14
NSMCE1-203ENST00000562039 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.18□□□□□ -0.14
NSMCE1-203ENST00000562039 CLTCL1P53675 1640 aa14.18□□□□□ -0.14
NSMCE1-203ENST00000562039 TMEM94Q12767 1356 aa14.18□□□□□ -0.14
NSMCE1-203ENST00000562039 PLEKHG1Q9ULL1 1385 aa14.18□□□□□ -0.14
NSMCE1-203ENST00000562039 ALKQ9UM73 1620 aa14.16□□□□□ -0.14
NSMCE1-203ENST00000562039 XIRP1Q702N8 1843 aaKnown RBP14.15□□□□□ -0.14
NSMCE1-203ENST00000562039 DISP3Q9P2K9 1392 aa14.15□□□□□ -0.14
NSMCE1-203ENST00000562039 ADAMTS13Q76LX8 1427 aa14.14□□□□□ -0.15
NSMCE1-203ENST00000562039 MPHOSPH9Q99550 1183 aa14.13□□□□□ -0.15
NSMCE1-203ENST00000562039 TRPM2O94759 1503 aa14.13□□□□□ -0.15
NSMCE1-203ENST00000562039 C14orf37Q86TY3 774 aa14.12□□□□□ -0.15
NSMCE1-203ENST00000562039 TBX22Q9Y458 520 aa14.12□□□□□ -0.15
NSMCE1-203ENST00000562039 RGL3Q3MIN7 710 aa14.11□□□□□ -0.15
NSMCE1-203ENST00000562039 SETD5Q9C0A6 1442 aa14.11□□□□□ -0.15
NSMCE1-203ENST00000562039 KIF1BO60333 1816 aa14.11□□□□□ -0.15
NSMCE1-203ENST00000562039 AMOTL2Q9Y2J4 779 aa14.1□□□□□ -0.15
NSMCE1-203ENST00000562039 CHD2O14647 1828 aaKnown RBP14.1□□□□□ -0.15
NSMCE1-203ENST00000562039 NWD1Q149M9 1564 aa14.09□□□□□ -0.15
NSMCE1-203ENST00000562039 PTPRUQ92729 1446 aa14.09□□□□□ -0.15
NSMCE1-203ENST00000562039 RAB3GAP2Q9H2M9 1393 aa14.09□□□□□ -0.15
NSMCE1-203ENST00000562039 NEXMIFQ5QGS0 1516 aa14.08□□□□□ -0.16
NSMCE1-203ENST00000562039 NKTRP30414 1462 aaKnown RBP14.07□□□□□ -0.16
NSMCE1-203ENST00000562039 NRXN3Q9Y4C0 1643 aa14.07□□□□□ -0.16
NSMCE1-203ENST00000562039 METP08581 1390 aa14.07□□□□□ -0.16
NSMCE1-203ENST00000562039 ILDR2Q71H61 639 aa14.06□□□□□ -0.16
NSMCE1-203ENST00000562039 MSH6P52701 1360 aa14.06□□□□□ -0.16
NSMCE1-203ENST00000562039 CCDC144AA2RUR9 1427 aa14.05□□□□□ -0.16
NSMCE1-203ENST00000562039 DIP2AQ14689 1571 aa14.04□□□□□ -0.16
NSMCE1-203ENST00000562039 SETBP1Q9Y6X0 1596 aa14.03□□□□□ -0.16
NSMCE1-203ENST00000562039 ADGRF5Q8IZF2 1346 aa14.02□□□□□ -0.17
NSMCE1-203ENST00000562039 VGFO15240 615 aaPredicted RBP14.02□□□□□ -0.17
NSMCE1-203ENST00000562039 SLAIN2Q9P270 581 aa14.02□□□□□ -0.17
NSMCE1-203ENST00000562039 PIK3R4Q99570 1358 aa14.01□□□□□ -0.17
NSMCE1-203ENST00000562039 ROBO1Q9Y6N7 1651 aa14.01□□□□□ -0.17
NSMCE1-203ENST00000562039 ATF3P18847 181 aa14□□□□□ -0.17
NSMCE1-203ENST00000562039 PPLO60437 1756 aa13.99□□□□□ -0.17
NSMCE1-203ENST00000562039 RPGRIP1LQ68CZ1 1315 aa13.99□□□□□ -0.17
NSMCE1-203ENST00000562039 STK26Q9P289 416 aa13.99□□□□□ -0.17
NSMCE1-203ENST00000562039 FAM135BQ49AJ0 1406 aa13.98□□□□□ -0.17
NSMCE1-203ENST00000562039 XRN1Q8IZH2 1706 aaKnown RBP13.98□□□□□ -0.17
NSMCE1-203ENST00000562039 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.98□□□□□ -0.17
NSMCE1-203ENST00000562039 MED1Q15648 1581 aaPredicted RBP13.98□□□□□ -0.17
NSMCE1-203ENST00000562039 C19orf44Q9H6X5 657 aa13.98□□□□□ -0.17
NSMCE1-203ENST00000562039 SPATA31E1Q6ZUB1 1445 aa13.98□□□□□ -0.17
NSMCE1-203ENST00000562039 TMEM132EQ6IEE7 984 aa13.97□□□□□ -0.17
NSMCE1-203ENST00000562039 PHF23Q9BUL5 403 aaPredicted RBP13.97□□□□□ -0.17
NSMCE1-203ENST00000562039 ROBO2Q9HCK4 1378 aa13.96□□□□□ -0.18
NSMCE1-203ENST00000562039 CADPS2Q86UW7 1296 aa13.95□□□□□ -0.18
NSMCE1-203ENST00000562039 SETD1AO15047 1707 aaKnown RBP13.95□□□□□ -0.18
NSMCE1-203ENST00000562039 DDX17Q92841 729 aaKnown RBP13.94□□□□□ -0.18
NSMCE1-203ENST00000562039 PHLPP1O60346 1717 aa13.93□□□□□ -0.18
NSMCE1-203ENST00000562039 NCOA3Q9Y6Q9 1424 aa13.93□□□□□ -0.18
NSMCE1-203ENST00000562039 KDM2AQ9Y2K7 1162 aa13.93□□□□□ -0.18
NSMCE1-203ENST00000562039 BRINP3Q76B58 766 aa13.92□□□□□ -0.18
NSMCE1-203ENST00000562039 WAPLQ7Z5K2 1190 aa13.92□□□□□ -0.18
NSMCE1-203ENST00000562039 NALCNQ8IZF0 1738 aa13.91□□□□□ -0.18
NSMCE1-203ENST00000562039 IFT172Q9UG01 1749 aa13.91□□□□□ -0.18
NSMCE1-203ENST00000562039 NUTM2FA1L443 756 aa13.91□□□□□ -0.18
NSMCE1-203ENST00000562039 CFAP70Q5T0N1 1121 aa13.91□□□□□ -0.18
NSMCE1-203ENST00000562039 ANKRD30BQ9BXX2 1392 aa13.91□□□□□ -0.18
NSMCE1-203ENST00000562039 ADGRL3Q9HAR2 1447 aa13.9□□□□□ -0.18
NSMCE1-203ENST00000562039 MST1RQ04912 1400 aa13.9□□□□□ -0.19
NSMCE1-203ENST00000562039 ACIN1Q9UKV3 1341 aaKnown RBP13.9□□□□□ -0.19
NSMCE1-203ENST00000562039 PLEKHH1Q9ULM0 1364 aa13.89□□□□□ -0.19
NSMCE1-203ENST00000562039 ASXL1Q8IXJ9 1541 aa13.89□□□□□ -0.19
NSMCE1-203ENST00000562039 SAFB2Q14151 953 aaKnown RBP eCLIP13.88□□□□□ -0.19
NSMCE1-203ENST00000562039 DCAF11Q8TEB1 546 aa13.88□□□□□ -0.19
NSMCE1-203ENST00000562039 ORAI2Q96SN7 254 aa13.88□□□□□ -0.19
NSMCE1-203ENST00000562039 PIK3C2GO75747 1445 aa13.88□□□□□ -0.19
NSMCE1-203ENST00000562039 NUTM2BA6NNL0 878 aaPredicted RBP13.87□□□□□ -0.19
NSMCE1-203ENST00000562039 NUTM2EB1AL46 878 aaPredicted RBP13.87□□□□□ -0.19
NSMCE1-203ENST00000562039 NUTM2AQ8IVF1 878 aaPredicted RBP13.87□□□□□ -0.19
NSMCE1-203ENST00000562039 PTCH1Q13635 1447 aa13.87□□□□□ -0.19
NSMCE1-203ENST00000562039 COL16A1Q07092 1604 aaPredicted RBP13.86□□□□□ -0.19
NSMCE1-203ENST00000562039 HRCP23327 699 aa13.86□□□□□ -0.19
NSMCE1-203ENST00000562039 RGS17Q9UGC6 210 aaPredicted RBP13.86□□□□□ -0.19
NSMCE1-203ENST00000562039 LRPPRCP42704 1394 aaKnown RBP13.85□□□□□ -0.19
NSMCE1-203ENST00000562039 JCADQ9P266 1359 aa13.85□□□□□ -0.19
NSMCE1-203ENST00000562039 DCCP43146 1447 aa13.85□□□□□ -0.19
NSMCE1-203ENST00000562039 C14orf93Q9H972 538 aaKnown RBP13.85□□□□□ -0.19
NSMCE1-203ENST00000562039 YTHDC2Q9H6S0 1430 aaKnown RBP13.84□□□□□ -0.19
NSMCE1-203ENST00000562039 C1orf167Q5SNV9 1468 aa13.84□□□□□ -0.19
NSMCE1-203ENST00000562039 XPCQ01831 940 aaPredicted RBP13.83□□□□□ -0.2
NSMCE1-203ENST00000562039 MEX3CQ5U5Q3 659 aaKnown RBP13.83□□□□□ -0.2
NSMCE1-203ENST00000562039 AHDC1Q5TGY3 1603 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms