RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 ANKRD50Q9ULJ7 1429 aa8.62□□□□□ -1.03
LINC01963-201ENST00000562038 TSPY4P0CV99 314 aa8.62□□□□□ -1.03
LINC01963-201ENST00000562038 TSPY10P0CW01 314 aa8.62□□□□□ -1.03
LINC01963-201ENST00000562038 RANGAP1P46060 587 aaPredicted RBP8.62□□□□□ -1.03
LINC01963-201ENST00000562038 NOS1P29475 1434 aa8.62□□□□□ -1.03
LINC01963-201ENST00000562038 ATP1B4Q9UN42 357 aaPredicted RBP8.61□□□□□ -1.03
LINC01963-201ENST00000562038 IFT172Q9UG01 1749 aa8.61□□□□□ -1.03
LINC01963-201ENST00000562038 ERVK-7P63135 1459 aa8.61□□□□□ -1.03
LINC01963-201ENST00000562038 MYT1Q01538 1121 aa8.6□□□□□ -1.03
LINC01963-201ENST00000562038 RGS12O14924 1447 aa8.6□□□□□ -1.03
LINC01963-201ENST00000562038 ZMYM3Q14202 1370 aa8.6□□□□□ -1.03
LINC01963-201ENST00000562038 RGPD3A6NKT7 1758 aaPredicted RBP8.6□□□□□ -1.03
LINC01963-201ENST00000562038 RGPD4Q7Z3J3 1758 aa8.6□□□□□ -1.03
LINC01963-201ENST00000562038 ADGRB3O60242 1522 aa8.6□□□□□ -1.03
LINC01963-201ENST00000562038 ATAD2Q6PL18 1390 aa8.6□□□□□ -1.03
LINC01963-201ENST00000562038 KANK1Q14678 1352 aa8.6□□□□□ -1.03
LINC01963-201ENST00000562038 RGPD1P0DJD0 1748 aa8.59□□□□□ -1.03
LINC01963-201ENST00000562038 CHD2O14647 1828 aaKnown RBP8.59□□□□□ -1.03
LINC01963-201ENST00000562038 KCNA4P22459 653 aa8.59□□□□□ -1.03
LINC01963-201ENST00000562038 PRAG1Q86YV5 1406 aa8.59□□□□□ -1.03
LINC01963-201ENST00000562038 RREB1Q92766 1687 aa8.58□□□□□ -1.04
LINC01963-201ENST00000562038 HNRNPMP52272 730 aaKnown RBP eCLIP8.58□□□□□ -1.04
LINC01963-201ENST00000562038 AFAP1Q8N556 730 aa8.58□□□□□ -1.04
LINC01963-201ENST00000562038 ZNF644Q9H582 1327 aaPredicted RBP8.57□□□□□ -1.04
LINC01963-201ENST00000562038 ARID3CA6NKF2 412 aa8.57□□□□□ -1.04
LINC01963-201ENST00000562038 KIF1BO60333 1816 aa8.57□□□□□ -1.04
LINC01963-201ENST00000562038 ERICH6Q7L0X2 663 aa8.56□□□□□ -1.04
LINC01963-201ENST00000562038 NCKAP5LQ9HCH0 1330 aa8.56□□□□□ -1.04
LINC01963-201ENST00000562038 TMEM131LA2VDJ0 1609 aa8.56□□□□□ -1.04
LINC01963-201ENST00000562038 PELP1Q8IZL8 1130 aaKnown RBP8.56□□□□□ -1.04
LINC01963-201ENST00000562038 SETD5Q9C0A6 1442 aa8.55□□□□□ -1.04
LINC01963-201ENST00000562038 KIAA1210Q9ULL0 1709 aa8.55□□□□□ -1.04
LINC01963-201ENST00000562038 RALGAPBQ86X10 1494 aa8.54□□□□□ -1.04
LINC01963-201ENST00000562038 DISP2A7MBM2 1401 aa8.54□□□□□ -1.04
LINC01963-201ENST00000562038 NEXMIFQ5QGS0 1516 aa8.54□□□□□ -1.04
LINC01963-201ENST00000562038 ZFYVE9O95405 1425 aa8.53□□□□□ -1.04
LINC01963-201ENST00000562038 CHD4Q14839 1912 aa8.53□□□□□ -1.04
LINC01963-201ENST00000562038 PPLO60437 1756 aa8.53□□□□□ -1.04
LINC01963-201ENST00000562038 SCAF11Q99590 1463 aaKnown RBP8.53□□□□□ -1.04
LINC01963-201ENST00000562038 COL24A1Q17RW2 1714 aa8.52□□□□□ -1.05
LINC01963-201ENST00000562038 KNDC1Q76NI1 1749 aa8.52□□□□□ -1.05
LINC01963-201ENST00000562038 ZRANB1Q9UGI0 708 aa8.51□□□□□ -1.05
LINC01963-201ENST00000562038 DCCP43146 1447 aa8.51□□□□□ -1.05
LINC01963-201ENST00000562038 CLTCL1P53675 1640 aa8.51□□□□□ -1.05
LINC01963-201ENST00000562038 TNS1Q9HBL0 1735 aaKnown RBP8.5□□□□□ -1.05
LINC01963-201ENST00000562038 MYOM2P54296 1465 aa8.5□□□□□ -1.05
LINC01963-201ENST00000562038 ZNF777Q9ULD5 760 aaPredicted RBP8.5□□□□□ -1.05
LINC01963-201ENST00000562038 NRXN1Q9ULB1 1477 aa8.5□□□□□ -1.05
LINC01963-201ENST00000562038 TNRQ92752 1358 aa8.49□□□□□ -1.05
LINC01963-201ENST00000562038 KLHL34Q8N239 644 aa8.49□□□□□ -1.05
LINC01963-201ENST00000562038 STAC3Q96MF2 364 aa8.49□□□□□ -1.05
LINC01963-201ENST00000562038 ATRNO75882 1429 aa8.49□□□□□ -1.05
LINC01963-201ENST00000562038 CEBPAP49715 358 aaPredicted RBP8.48□□□□□ -1.05
LINC01963-201ENST00000562038 PTCH1Q13635 1447 aa8.47□□□□□ -1.05
LINC01963-201ENST00000562038 CLSPNQ9HAW4 1339 aa8.47□□□□□ -1.05
LINC01963-201ENST00000562038 NWD2Q9ULI1 1742 aa8.47□□□□□ -1.05
LINC01963-201ENST00000562038 SLC52A1Q9NWF4 448 aa8.47□□□□□ -1.05
LINC01963-201ENST00000562038 BLMP54132 1417 aaPredicted RBP8.47□□□□□ -1.05
LINC01963-201ENST00000562038 BRWD3Q6RI45 1802 aa8.46□□□□□ -1.05
LINC01963-201ENST00000562038 MYO5BQ9ULV0 1848 aa8.46□□□□□ -1.06
LINC01963-201ENST00000562038 XRN1Q8IZH2 1706 aaKnown RBP8.45□□□□□ -1.06
LINC01963-201ENST00000562038 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.45□□□□□ -1.06
LINC01963-201ENST00000562038 PIK3R4Q99570 1358 aa8.45□□□□□ -1.06
LINC01963-201ENST00000562038 NRXN3Q9Y4C0 1643 aa8.45□□□□□ -1.06
LINC01963-201ENST00000562038 RPGRIP1LQ68CZ1 1315 aa8.44□□□□□ -1.06
LINC01963-201ENST00000562038 FAM50AQ14320 339 aaKnown RBP8.44□□□□□ -1.06
LINC01963-201ENST00000562038 CASZ1Q86V15 1759 aa8.44□□□□□ -1.06
LINC01963-201ENST00000562038 KIF3BO15066 747 aa8.44□□□□□ -1.06
LINC01963-201ENST00000562038 RXRBP28702 533 aa8.44□□□□□ -1.06
LINC01963-201ENST00000562038 SPATA31E1Q6ZUB1 1445 aa8.44□□□□□ -1.06
LINC01963-201ENST00000562038 NINLQ9Y2I6 1382 aa8.43□□□□□ -1.06
LINC01963-201ENST00000562038 PLEKHG5O94827 1062 aa8.43□□□□□ -1.06
LINC01963-201ENST00000562038 RAB3GAP2Q9H2M9 1393 aa8.43□□□□□ -1.06
LINC01963-201ENST00000562038 TULP1O00294 542 aaPredicted RBP8.42□□□□□ -1.06
LINC01963-201ENST00000562038 WASHC2CQ9Y4E1 1318 aa8.42□□□□□ -1.06
LINC01963-201ENST00000562038 ANKLE2Q86XL3 938 aa8.42□□□□□ -1.06
LINC01963-201ENST00000562038 RBM33Q96EV2 1170 aaKnown RBP8.42□□□□□ -1.06
LINC01963-201ENST00000562038 NUP188Q5SRE5 1749 aa8.42□□□□□ -1.06
LINC01963-201ENST00000562038 ADGRB2O60241 1585 aa8.42□□□□□ -1.06
LINC01963-201ENST00000562038 DLC1Q96QB1 1528 aa8.42□□□□□ -1.06
LINC01963-201ENST00000562038 NUP155O75694 1391 aa8.41□□□□□ -1.06
LINC01963-201ENST00000562038 PLEKHG1Q9ULL1 1385 aa8.41□□□□□ -1.06
LINC01963-201ENST00000562038 USP32Q8NFA0 1604 aa8.41□□□□□ -1.06
LINC01963-201ENST00000562038 PIP4K2BP78356 416 aa8.41□□□□□ -1.06
LINC01963-201ENST00000562038 TRIM26Q12899 539 aaPredicted RBP8.4□□□□□ -1.06
LINC01963-201ENST00000562038 AMER1Q5JTC6 1135 aaPredicted RBP8.4□□□□□ -1.06
LINC01963-201ENST00000562038 RRP7BPQ9NSQ0 103 aa8.4□□□□□ -1.06
LINC01963-201ENST00000562038 RBM6P78332 1123 aaKnown RBP8.4□□□□□ -1.06
LINC01963-201ENST00000562038 ESF1Q9H501 851 aaKnown RBP8.4□□□□□ -1.06
LINC01963-201ENST00000562038 ANKRD30BQ9BXX2 1392 aa8.4□□□□□ -1.06
LINC01963-201ENST00000562038 TMEM2Q9UHN6 1383 aa8.39□□□□□ -1.07
LINC01963-201ENST00000562038 THEMISQ8N1K5 641 aaPredicted RBP8.38□□□□□ -1.07
LINC01963-201ENST00000562038 TECPR2O15040 1411 aa8.38□□□□□ -1.07
LINC01963-201ENST00000562038 ARXQ96QS3 562 aa8.38□□□□□ -1.07
LINC01963-201ENST00000562038 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.37□□□□□ -1.07
LINC01963-201ENST00000562038 ASXL1Q8IXJ9 1541 aa8.37□□□□□ -1.07
LINC01963-201ENST00000562038 CCDC144AA2RUR9 1427 aa8.36□□□□□ -1.07
LINC01963-201ENST00000562038 QSER1Q2KHR3 1735 aa8.36□□□□□ -1.07
LINC01963-201ENST00000562038 PARD3Q8TEW0 1356 aa8.36□□□□□ -1.07
LINC01963-201ENST00000562038 HDGFP51858 240 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms