RNA–Protein interactions for RNA: ENST00000561863.1

DENND4A-203, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-203ENST00000561863 IRF6O14896 467 aa13□□□□□ -0.33
DENND4A-203ENST00000561863 ZMYND10O75800 440 aa13□□□□□ -0.33
DENND4A-203ENST00000561863 MINK1Q8N4C8 1332 aaPredicted RBP12.99□□□□□ -0.33
DENND4A-203ENST00000561863 PPP4CP60510 307 aa12.99□□□□□ -0.33
DENND4A-203ENST00000561863 CCDC102AQ96A19 550 aa12.99□□□□□ -0.33
DENND4A-203ENST00000561863 BARGINQ6ZT62 677 aa12.98□□□□□ -0.33
DENND4A-203ENST00000561863 SLF2Q8IX21 1173 aa12.98□□□□□ -0.33
DENND4A-203ENST00000561863 KRI1Q8N9T8 703 aaKnown RBP12.95□□□□□ -0.34
DENND4A-203ENST00000561863 SLC4A3P48751 1232 aa12.93□□□□□ -0.34
DENND4A-203ENST00000561863 NYAP1Q6ZVC0 841 aa12.93□□□□□ -0.34
DENND4A-203ENST00000561863 APLP1P51693 650 aa12.91□□□□□ -0.34
DENND4A-203ENST00000561863 PLA2G2EQ9NZK7 142 aa12.91□□□□□ -0.34
DENND4A-203ENST00000561863 SLC10A3P09131 477 aa12.9□□□□□ -0.34
DENND4A-203ENST00000561863 DAXXQ9UER7 740 aaPredicted RBP12.9□□□□□ -0.34
DENND4A-203ENST00000561863 MDM2Q00987 491 aaPredicted RBP12.88□□□□□ -0.35
DENND4A-203ENST00000561863 NECTIN2Q92692 538 aa12.87□□□□□ -0.35
DENND4A-203ENST00000561863 DDX11L8A8MPP1 907 aa12.86□□□□□ -0.35
DENND4A-203ENST00000561863 CFHP08603 1231 aa12.85□□□□□ -0.35
DENND4A-203ENST00000561863 RDH13Q8NBN7 331 aa12.83□□□□□ -0.36
DENND4A-203ENST00000561863 ITGBL1O95965 494 aaPredicted RBP12.82□□□□□ -0.36
DENND4A-203ENST00000561863 SLC24A3Q9HC58 644 aa12.82□□□□□ -0.36
DENND4A-203ENST00000561863 MTRQ99707 1265 aa12.81□□□□□ -0.36
DENND4A-203ENST00000561863 KMT5BQ4FZB7 885 aa12.8□□□□□ -0.36
DENND4A-203ENST00000561863 TJAP1Q5JTD0 557 aa12.8□□□□□ -0.36
DENND4A-203ENST00000561863 REPIN1Q9BWE0 567 aaKnown RBP12.8□□□□□ -0.36
DENND4A-203ENST00000561863 SULF1Q8IWU6 871 aa12.79□□□□□ -0.36
DENND4A-203ENST00000561863 AK7Q96M32 723 aa12.79□□□□□ -0.36
DENND4A-203ENST00000561863 TRIM66O15016 1216 aa12.78□□□□□ -0.36
DENND4A-203ENST00000561863 COPS2P61201 443 aa12.78□□□□□ -0.36
DENND4A-203ENST00000561863 RSPH4AQ5TD94 716 aa12.78□□□□□ -0.36
DENND4A-203ENST00000561863 TMUB1Q9BVT8 246 aa12.78□□□□□ -0.36
DENND4A-203ENST00000561863 PRR14Q9BWN1 585 aa12.78□□□□□ -0.36
DENND4A-203ENST00000561863 GPCPD1Q9NPB8 672 aa12.78□□□□□ -0.36
DENND4A-203ENST00000561863 ACTN4O43707 911 aaKnown RBP12.77□□□□□ -0.37
DENND4A-203ENST00000561863 CLCN1P35523 988 aa12.77□□□□□ -0.37
DENND4A-203ENST00000561863 KCNC4Q03721 635 aa12.77□□□□□ -0.37
DENND4A-203ENST00000561863 PCDHB3Q9Y5E6 796 aa12.77□□□□□ -0.37
DENND4A-203ENST00000561863 TTLL12Q14166 644 aaPredicted RBP12.76□□□□□ -0.37
DENND4A-203ENST00000561863 AMHR2Q16671 573 aa12.76□□□□□ -0.37
DENND4A-203ENST00000561863 ZNF516Q92618 1163 aa12.76□□□□□ -0.37
DENND4A-203ENST00000561863 BLOC1S3Q6QNY0 202 aa12.75□□□□□ -0.37
DENND4A-203ENST00000561863 IL21Q9HBE4 155 aa12.75□□□□□ -0.37
DENND4A-203ENST00000561863 CD46P15529 392 aa12.74□□□□□ -0.37
DENND4A-203ENST00000561863 FAM217BQ9NTX9 383 aaPredicted RBP12.74□□□□□ -0.37
DENND4A-203ENST00000561863 GCGRP47871 477 aa12.73□□□□□ -0.37
DENND4A-203ENST00000561863 IFFO2Q5TF58 517 aa12.73□□□□□ -0.37
DENND4A-203ENST00000561863 PUS10Q3MIT2 529 aaKnown RBP12.72□□□□□ -0.37
DENND4A-203ENST00000561863 FUT2Q10981 343 aa12.71□□□□□ -0.37
DENND4A-203ENST00000561863 PARP9Q8IXQ6 854 aa12.71□□□□□ -0.37
DENND4A-203ENST00000561863 GIGYF2Q6Y7W6 1299 aaKnown RBP12.7□□□□□ -0.38
DENND4A-203ENST00000561863 SSTR3P32745 418 aaPredicted RBP12.68□□□□□ -0.38
DENND4A-203ENST00000561863 PDE4DQ08499 809 aa12.68□□□□□ -0.38
DENND4A-203ENST00000561863 NKX2-3Q8TAU0 364 aa12.68□□□□□ -0.38
DENND4A-203ENST00000561863 A0A0G2JS52 829 aa12.67□□□□□ -0.38
DENND4A-203ENST00000561863 ZPR1O75312 459 aa12.67□□□□□ -0.38
DENND4A-203ENST00000561863 TLL1O43897 1013 aa12.66□□□□□ -0.38
DENND4A-203ENST00000561863 ATP6V1AP38606 617 aa12.64□□□□□ -0.39
DENND4A-203ENST00000561863 MORN1Q5T089 497 aa12.64□□□□□ -0.39
DENND4A-203ENST00000561863 KDM4AO75164 1064 aa12.63□□□□□ -0.39
DENND4A-203ENST00000561863 TPRNQ4KMQ1 711 aa12.63□□□□□ -0.39
DENND4A-203ENST00000561863 NR1I2O75469 434 aa12.62□□□□□ -0.39
DENND4A-203ENST00000561863 SCUBE3Q8IX30 993 aa12.62□□□□□ -0.39
DENND4A-203ENST00000561863 MS4A1P11836 297 aa12.61□□□□□ -0.39
DENND4A-203ENST00000561863 HLA-CQ95604 372 aa12.61□□□□□ -0.39
DENND4A-203ENST00000561863 SLC27A5Q9Y2P5 690 aa12.6□□□□□ -0.39
DENND4A-203ENST00000561863 BEGAINQ9BUH8 593 aa12.59□□□□□ -0.39
DENND4A-203ENST00000561863 HOXA2O43364 376 aa12.57□□□□□ -0.4
DENND4A-203ENST00000561863 NUTM1Q86Y26 1132 aa12.57□□□□□ -0.4
DENND4A-203ENST00000561863 GUCA2AQ02747 115 aa12.56□□□□□ -0.4
DENND4A-203ENST00000561863 GRIPAP1Q4V328 841 aa12.56□□□□□ -0.4
DENND4A-203ENST00000561863 PPP1R18Q6NYC8 613 aa12.56□□□□□ -0.4
DENND4A-203ENST00000561863 ADH1BP00325 375 aa12.55□□□□□ -0.4
DENND4A-203ENST00000561863 USP46P62068 366 aa12.55□□□□□ -0.4
DENND4A-203ENST00000561863 SPIRE2Q8WWL2 714 aa12.55□□□□□ -0.4
DENND4A-203ENST00000561863 GPBP1L1Q9HC44 474 aaPredicted RBP12.55□□□□□ -0.4
DENND4A-203ENST00000561863 THAP11Q96EK4 314 aa12.54□□□□□ -0.4
DENND4A-203ENST00000561863 RNF19BQ6ZMZ0 732 aa12.53□□□□□ -0.4
DENND4A-203ENST00000561863 SPSB2Q99619 263 aa12.53□□□□□ -0.4
DENND4A-203ENST00000561863 S1PR4O95977 384 aa12.52□□□□□ -0.41
DENND4A-203ENST00000561863 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.52□□□□□ -0.41
DENND4A-203ENST00000561863 FMNL1O95466 1100 aaPredicted RBP12.5□□□□□ -0.41
DENND4A-203ENST00000561863 NDUFV2P19404 249 aa12.5□□□□□ -0.41
DENND4A-203ENST00000561863 BRICD5Q6PL45 260 aa12.5□□□□□ -0.41
DENND4A-203ENST00000561863 MOXD2PA6NHM9 499 aa12.49□□□□□ -0.41
DENND4A-203ENST00000561863 TBC1D2Q9BYX2 928 aa12.49□□□□□ -0.41
DENND4A-203ENST00000561863 SLC6A16Q9GZN6 736 aa12.49□□□□□ -0.41
DENND4A-203ENST00000561863 KDM4CQ9H3R0 1056 aa12.49□□□□□ -0.41
DENND4A-203ENST00000561863 PRKCSHP14314 528 aaPredicted RBP12.48□□□□□ -0.41
DENND4A-203ENST00000561863 GGCXP38435 758 aa12.48□□□□□ -0.41
DENND4A-203ENST00000561863 SALL2Q9Y467 1007 aaPredicted RBP12.48□□□□□ -0.41
DENND4A-203ENST00000561863 RNF223E7ERA6 249 aa12.47□□□□□ -0.41
DENND4A-203ENST00000561863 PPEF1O14829 653 aaPredicted RBP12.47□□□□□ -0.41
DENND4A-203ENST00000561863 FDX1P10109 184 aa12.47□□□□□ -0.41
DENND4A-203ENST00000561863 FAM160A2Q8N612 972 aaPredicted RBP12.47□□□□□ -0.41
DENND4A-203ENST00000561863 Q3C1V9 767 aa12.46□□□□□ -0.41
DENND4A-203ENST00000561863 SYMPKQ92797 1274 aaKnown RBP12.46□□□□□ -0.41
DENND4A-203ENST00000561863 PRDM9Q9NQV7 894 aa12.46□□□□□ -0.41
DENND4A-203ENST00000561863 PCDHGC3Q9UN70 934 aa12.46□□□□□ -0.41
DENND4A-203ENST00000561863 RGS20O76081 388 aa12.43□□□□□ -0.42
DENND4A-203ENST00000561863 FAM117AQ9C073 453 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms