RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 SYNMO15061 1565 aa14.19□□□□□ -0.14
TUBGCP4-202ENST00000561691 PIK3C2BO00750 1634 aa14.19□□□□□ -0.14
TUBGCP4-202ENST00000561691 ZC3H13Q5T200 1668 aaKnown RBP14.18□□□□□ -0.14
TUBGCP4-202ENST00000561691 IQGAP1P46940 1657 aa14.18□□□□□ -0.14
TUBGCP4-202ENST00000561691 AGLP35573 1532 aa14.18□□□□□ -0.14
TUBGCP4-202ENST00000561691 WASHC2CQ9Y4E1 1318 aa14.17□□□□□ -0.14
TUBGCP4-202ENST00000561691 KIF1BO60333 1816 aa14.16□□□□□ -0.14
TUBGCP4-202ENST00000561691 KIAA1210Q9ULL0 1709 aa14.16□□□□□ -0.14
TUBGCP4-202ENST00000561691 ERICH6Q7L0X2 663 aa14.16□□□□□ -0.14
TUBGCP4-202ENST00000561691 PRKRIP1Q9H875 184 aaPredicted RBP14.16□□□□□ -0.14
TUBGCP4-202ENST00000561691 ADGRF5Q8IZF2 1346 aa14.14□□□□□ -0.15
TUBGCP4-202ENST00000561691 DISP3Q9P2K9 1392 aa14.14□□□□□ -0.15
TUBGCP4-202ENST00000561691 CCDC184Q52MB2 194 aa14.13□□□□□ -0.15
TUBGCP4-202ENST00000561691 ARHGEF40Q8TER5 1519 aa14.13□□□□□ -0.15
TUBGCP4-202ENST00000561691 SCAF11Q99590 1463 aaKnown RBP14.12□□□□□ -0.15
TUBGCP4-202ENST00000561691 PPLO60437 1756 aa14.12□□□□□ -0.15
TUBGCP4-202ENST00000561691 CFAP65Q6ZU64 1925 aaKnown RBP14.1□□□□□ -0.15
TUBGCP4-202ENST00000561691 PIK3C2GO75747 1445 aa14.1□□□□□ -0.15
TUBGCP4-202ENST00000561691 PREX1Q8TCU6 1659 aa14.1□□□□□ -0.15
TUBGCP4-202ENST00000561691 NEXMIFQ5QGS0 1516 aa14.09□□□□□ -0.15
TUBGCP4-202ENST00000561691 CFAP70Q5T0N1 1121 aa14.08□□□□□ -0.16
TUBGCP4-202ENST00000561691 ADGRB1O14514 1584 aa14.07□□□□□ -0.16
TUBGCP4-202ENST00000561691 ERVK-7P63135 1459 aa14.07□□□□□ -0.16
TUBGCP4-202ENST00000561691 RPGRIP1LQ68CZ1 1315 aa14.07□□□□□ -0.16
TUBGCP4-202ENST00000561691 SETBP1Q9Y6X0 1596 aa14.06□□□□□ -0.16
TUBGCP4-202ENST00000561691 PER1O15534 1290 aaPredicted RBP14.06□□□□□ -0.16
TUBGCP4-202ENST00000561691 IDI1Q13907 227 aa14.06□□□□□ -0.16
TUBGCP4-202ENST00000561691 PPP6R1Q9UPN7 881 aa14.05□□□□□ -0.16
TUBGCP4-202ENST00000561691 TMEM131LA2VDJ0 1609 aa14.05□□□□□ -0.16
TUBGCP4-202ENST00000561691 POLR3GLQ9BT43 218 aa14.05□□□□□ -0.16
TUBGCP4-202ENST00000561691 MYO3AQ8NEV4 1616 aa14.04□□□□□ -0.16
TUBGCP4-202ENST00000561691 FBXO31Q5XUX0 539 aaPredicted RBP14.03□□□□□ -0.16
TUBGCP4-202ENST00000561691 C14orf93Q9H972 538 aaKnown RBP14.03□□□□□ -0.16
TUBGCP4-202ENST00000561691 ZFYVE9O95405 1425 aa14.03□□□□□ -0.16
TUBGCP4-202ENST00000561691 SLC52A1Q9NWF4 448 aa14.03□□□□□ -0.16
TUBGCP4-202ENST00000561691 SPATA31D1Q6ZQQ2 1576 aa14.03□□□□□ -0.16
TUBGCP4-202ENST00000561691 CLTCQ00610 1675 aaKnown RBP14.03□□□□□ -0.16
TUBGCP4-202ENST00000561691 CHGAP10645 457 aaKnown RBP14.02□□□□□ -0.17
TUBGCP4-202ENST00000561691 TMF1P82094 1093 aa14.02□□□□□ -0.17
TUBGCP4-202ENST00000561691 MYO5BQ9ULV0 1848 aa14□□□□□ -0.17
TUBGCP4-202ENST00000561691 MYOM1P52179 1685 aa14□□□□□ -0.17
TUBGCP4-202ENST00000561691 ASXL1Q8IXJ9 1541 aa13.99□□□□□ -0.17
TUBGCP4-202ENST00000561691 PARD3Q8TEW0 1356 aa13.99□□□□□ -0.17
TUBGCP4-202ENST00000561691 SBNO2Q9Y2G9 1366 aa13.99□□□□□ -0.17
TUBGCP4-202ENST00000561691 EIF3AQ14152 1382 aaKnown RBP13.98□□□□□ -0.17
TUBGCP4-202ENST00000561691 MRS2Q9HD23 443 aa13.98□□□□□ -0.17
TUBGCP4-202ENST00000561691 KTN1Q86UP2 1357 aaKnown RBP13.97□□□□□ -0.17
TUBGCP4-202ENST00000561691 PANK3Q9H999 370 aa13.96□□□□□ -0.17
TUBGCP4-202ENST00000561691 A2ML1A8K2U0 1454 aa13.95□□□□□ -0.18
TUBGCP4-202ENST00000561691 VGFO15240 615 aaPredicted RBP13.94□□□□□ -0.18
TUBGCP4-202ENST00000561691 RALBP1Q15311 655 aa13.94□□□□□ -0.18
TUBGCP4-202ENST00000561691 NUTM2DQ5VT03 806 aaPredicted RBP13.94□□□□□ -0.18
TUBGCP4-202ENST00000561691 TMEM132EQ6IEE7 984 aa13.94□□□□□ -0.18
TUBGCP4-202ENST00000561691 ZMYM3Q14202 1370 aa13.93□□□□□ -0.18
TUBGCP4-202ENST00000561691 MLECQ14165 292 aa13.93□□□□□ -0.18
TUBGCP4-202ENST00000561691 MYBBP1AQ9BQG0 1328 aaKnown RBP13.93□□□□□ -0.18
TUBGCP4-202ENST00000561691 BRD4O60885 1362 aaPredicted RBP13.92□□□□□ -0.18
TUBGCP4-202ENST00000561691 ARHGEF28Q8N1W1 1705 aaKnown RBP13.92□□□□□ -0.18
TUBGCP4-202ENST00000561691 PNISRQ8TF01 805 aaKnown RBP13.92□□□□□ -0.18
TUBGCP4-202ENST00000561691 KDM5AP29375 1690 aaKnown RBP13.92□□□□□ -0.18
TUBGCP4-202ENST00000561691 LRPPRCP42704 1394 aaKnown RBP13.92□□□□□ -0.18
TUBGCP4-202ENST00000561691 CENPJQ9HC77 1338 aaPredicted RBP13.91□□□□□ -0.18
TUBGCP4-202ENST00000561691 QRICH2Q9H0J4 1663 aa13.91□□□□□ -0.18
TUBGCP4-202ENST00000561691 HNRNPUQ00839 825 aaKnown RBP eCLIP13.91□□□□□ -0.18
TUBGCP4-202ENST00000561691 TRAK1Q9UPV9 953 aa13.91□□□□□ -0.18
TUBGCP4-202ENST00000561691 RBM19Q9Y4C8 960 aaKnown RBP13.91□□□□□ -0.18
TUBGCP4-202ENST00000561691 CNGB1Q14028 1251 aaPredicted RBP13.9□□□□□ -0.18
TUBGCP4-202ENST00000561691 AMER1Q5JTC6 1135 aaPredicted RBP13.9□□□□□ -0.18
TUBGCP4-202ENST00000561691 FAM9BQ8IZU0 186 aa13.9□□□□□ -0.18
TUBGCP4-202ENST00000561691 CDCA8Q53HL2 280 aa13.9□□□□□ -0.18
TUBGCP4-202ENST00000561691 PTPRMP28827 1452 aa13.9□□□□□ -0.19
TUBGCP4-202ENST00000561691 TULP4Q9NRJ4 1543 aa13.89□□□□□ -0.19
TUBGCP4-202ENST00000561691 ALKQ9UM73 1620 aa13.89□□□□□ -0.19
TUBGCP4-202ENST00000561691 SETD1AO15047 1707 aaKnown RBP13.88□□□□□ -0.19
TUBGCP4-202ENST00000561691 NPC1L1Q9UHC9 1359 aa13.87□□□□□ -0.19
TUBGCP4-202ENST00000561691 SLC24A1O60721 1099 aa13.87□□□□□ -0.19
TUBGCP4-202ENST00000561691 RIMS2Q9UQ26 1411 aa13.87□□□□□ -0.19
TUBGCP4-202ENST00000561691 NRXN3Q9Y4C0 1643 aa13.87□□□□□ -0.19
TUBGCP4-202ENST00000561691 MSH5O43196 834 aa13.86□□□□□ -0.19
TUBGCP4-202ENST00000561691 CC2D1BQ5T0F9 858 aaKnown RBP13.86□□□□□ -0.19
TUBGCP4-202ENST00000561691 NLRP13Q86W25 1043 aa13.86□□□□□ -0.19
TUBGCP4-202ENST00000561691 CARD14Q9BXL6 1004 aa13.86□□□□□ -0.19
TUBGCP4-202ENST00000561691 ZBED9Q6R2W3 1325 aa13.86□□□□□ -0.19
TUBGCP4-202ENST00000561691 YTHDC2Q9H6S0 1430 aaKnown RBP13.85□□□□□ -0.19
TUBGCP4-202ENST00000561691 TNRQ92752 1358 aa13.84□□□□□ -0.19
TUBGCP4-202ENST00000561691 TMC1Q8TDI8 760 aa13.83□□□□□ -0.2
TUBGCP4-202ENST00000561691 PUS7Q96PZ0 661 aaKnown RBP13.83□□□□□ -0.2
TUBGCP4-202ENST00000561691 UBR1Q8IWV7 1749 aa13.82□□□□□ -0.2
TUBGCP4-202ENST00000561691 KNSTRNQ9Y448 316 aa13.81□□□□□ -0.2
TUBGCP4-202ENST00000561691 DLC1Q96QB1 1528 aa13.81□□□□□ -0.2
TUBGCP4-202ENST00000561691 INSRP06213 1382 aa13.8□□□□□ -0.2
TUBGCP4-202ENST00000561691 PPP2R1AP30153 589 aa13.8□□□□□ -0.2
TUBGCP4-202ENST00000561691 C3P01024 1663 aa13.79□□□□□ -0.2
TUBGCP4-202ENST00000561691 SLC12A5Q9H2X9 1139 aa13.78□□□□□ -0.2
TUBGCP4-202ENST00000561691 STAG3Q9UJ98 1225 aa13.78□□□□□ -0.2
TUBGCP4-202ENST00000561691 TMEM2Q9UHN6 1383 aa13.78□□□□□ -0.2
TUBGCP4-202ENST00000561691 FANCIQ9NVI1 1328 aa13.78□□□□□ -0.2
TUBGCP4-202ENST00000561691 USP32Q8NFA0 1604 aa13.78□□□□□ -0.2
TUBGCP4-202ENST00000561691 ESF1Q9H501 851 aaKnown RBP13.78□□□□□ -0.2
TUBGCP4-202ENST00000561691 STK26Q9P289 416 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms