RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 SPATA31E1Q6ZUB1 1445 aa14.16□□□□□ -0.14
RABGGTA-221ENST00000561055 NEXMIFQ5QGS0 1516 aa14.16□□□□□ -0.14
RABGGTA-221ENST00000561055 LTKP29376 864 aa14.16□□□□□ -0.14
RABGGTA-221ENST00000561055 HDGFP51858 240 aaKnown RBP14.16□□□□□ -0.14
RABGGTA-221ENST00000561055 TXNDC2Q86VQ3 553 aa14.16□□□□□ -0.14
RABGGTA-221ENST00000561055 EID1Q9Y6B2 187 aa14.16□□□□□ -0.14
RABGGTA-221ENST00000561055 RIMS2Q9UQ26 1411 aa14.15□□□□□ -0.14
RABGGTA-221ENST00000561055 DHX57Q6P158 1386 aaKnown RBP14.15□□□□□ -0.14
RABGGTA-221ENST00000561055 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.15□□□□□ -0.14
RABGGTA-221ENST00000561055 NPHP4O75161 1426 aaPredicted RBP14.15□□□□□ -0.14
RABGGTA-221ENST00000561055 CHGAP10645 457 aaKnown RBP14.14□□□□□ -0.15
RABGGTA-221ENST00000561055 PCGF6Q9BYE7 350 aa14.14□□□□□ -0.15
RABGGTA-221ENST00000561055 RPGRIP1LQ68CZ1 1315 aa14.14□□□□□ -0.15
RABGGTA-221ENST00000561055 PLEKHG1Q9ULL1 1385 aa14.11□□□□□ -0.15
RABGGTA-221ENST00000561055 NRXN3Q9Y4C0 1643 aa14.11□□□□□ -0.15
RABGGTA-221ENST00000561055 CHD2O14647 1828 aaKnown RBP14.11□□□□□ -0.15
RABGGTA-221ENST00000561055 SETBP1Q9Y6X0 1596 aa14.1□□□□□ -0.15
RABGGTA-221ENST00000561055 DIP2AQ14689 1571 aa14.09□□□□□ -0.15
RABGGTA-221ENST00000561055 ZNF326Q5BKZ1 582 aaKnown RBP14.09□□□□□ -0.15
RABGGTA-221ENST00000561055 STRCP1A6NGW2 1772 aa14.09□□□□□ -0.15
RABGGTA-221ENST00000561055 SETD1AO15047 1707 aaKnown RBP14.08□□□□□ -0.16
RABGGTA-221ENST00000561055 VGFO15240 615 aaPredicted RBP14.08□□□□□ -0.16
RABGGTA-221ENST00000561055 LTBP4Q8N2S1 1624 aa14.08□□□□□ -0.16
RABGGTA-221ENST00000561055 STAC3Q96MF2 364 aa14.06□□□□□ -0.16
RABGGTA-221ENST00000561055 TBX22Q9Y458 520 aa14.06□□□□□ -0.16
RABGGTA-221ENST00000561055 ADAMTS13Q76LX8 1427 aa14.06□□□□□ -0.16
RABGGTA-221ENST00000561055 PPP1R15AO75807 674 aaPredicted RBP14.05□□□□□ -0.16
RABGGTA-221ENST00000561055 MYOM2P54296 1465 aa14.05□□□□□ -0.16
RABGGTA-221ENST00000561055 NRXN1Q9ULB1 1477 aa14.05□□□□□ -0.16
RABGGTA-221ENST00000561055 RGL3Q3MIN7 710 aa14.04□□□□□ -0.16
RABGGTA-221ENST00000561055 NUTM2DQ5VT03 806 aaPredicted RBP14.03□□□□□ -0.16
RABGGTA-221ENST00000561055 PIK3R4Q99570 1358 aa14.03□□□□□ -0.16
RABGGTA-221ENST00000561055 NWD1Q149M9 1564 aa14.03□□□□□ -0.16
RABGGTA-221ENST00000561055 LAMC1P11047 1609 aa14.03□□□□□ -0.16
RABGGTA-221ENST00000561055 XIRP1Q702N8 1843 aaKnown RBP14.02□□□□□ -0.16
RABGGTA-221ENST00000561055 ALKQ9UM73 1620 aa14.02□□□□□ -0.16
RABGGTA-221ENST00000561055 CPS1P31327 1500 aa14.02□□□□□ -0.16
RABGGTA-221ENST00000561055 ZNF335Q9H4Z2 1342 aaPredicted RBP14.01□□□□□ -0.17
RABGGTA-221ENST00000561055 CLSPNQ9HAW4 1339 aa14.01□□□□□ -0.17
RABGGTA-221ENST00000561055 SLC26A8Q96RN1 970 aa14.01□□□□□ -0.17
RABGGTA-221ENST00000561055 KIAA1210Q9ULL0 1709 aa14.01□□□□□ -0.17
RABGGTA-221ENST00000561055 PIK3C2GO75747 1445 aa14□□□□□ -0.17
RABGGTA-221ENST00000561055 ADGRF5Q8IZF2 1346 aa14□□□□□ -0.17
RABGGTA-221ENST00000561055 IQSEC2Q5JU85 1478 aa13.99□□□□□ -0.17
RABGGTA-221ENST00000561055 XRN1Q8IZH2 1706 aaKnown RBP13.99□□□□□ -0.17
RABGGTA-221ENST00000561055 KCNA6P17658 529 aa13.99□□□□□ -0.17
RABGGTA-221ENST00000561055 SIN3AQ96ST3 1273 aa13.99□□□□□ -0.17
RABGGTA-221ENST00000561055 BCANQ96GW7 911 aa13.98□□□□□ -0.17
RABGGTA-221ENST00000561055 DCAF11Q8TEB1 546 aa13.97□□□□□ -0.17
RABGGTA-221ENST00000561055 NKTRP30414 1462 aaKnown RBP13.97□□□□□ -0.17
RABGGTA-221ENST00000561055 KNDC1Q76NI1 1749 aa13.96□□□□□ -0.17
RABGGTA-221ENST00000561055 PRAG1Q86YV5 1406 aa13.96□□□□□ -0.18
RABGGTA-221ENST00000561055 PTPRUQ92729 1446 aa13.96□□□□□ -0.18
RABGGTA-221ENST00000561055 METP08581 1390 aa13.96□□□□□ -0.18
RABGGTA-221ENST00000561055 LRRC7Q96NW7 1537 aa13.95□□□□□ -0.18
RABGGTA-221ENST00000561055 C14orf93Q9H972 538 aaKnown RBP13.95□□□□□ -0.18
RABGGTA-221ENST00000561055 CERKQ8TCT0 537 aa13.94□□□□□ -0.18
RABGGTA-221ENST00000561055 L3MBTL2Q969R5 705 aa13.94□□□□□ -0.18
RABGGTA-221ENST00000561055 NEUROD1Q13562 356 aa13.93□□□□□ -0.18
RABGGTA-221ENST00000561055 ASXL1Q8IXJ9 1541 aa13.93□□□□□ -0.18
RABGGTA-221ENST00000561055 NCOA3Q9Y6Q9 1424 aa13.92□□□□□ -0.18
RABGGTA-221ENST00000561055 SENP3Q9H4L4 574 aaPredicted RBP13.92□□□□□ -0.18
RABGGTA-221ENST00000561055 KDM2AQ9Y2K7 1162 aa13.92□□□□□ -0.18
RABGGTA-221ENST00000561055 TRPM1Q7Z4N2 1603 aa13.91□□□□□ -0.18
RABGGTA-221ENST00000561055 TIMELESSQ9UNS1 1208 aa13.91□□□□□ -0.18
RABGGTA-221ENST00000561055 AMOTL2Q9Y2J4 779 aa13.91□□□□□ -0.18
RABGGTA-221ENST00000561055 ADGRB1O14514 1584 aa13.91□□□□□ -0.18
RABGGTA-221ENST00000561055 TECPR2O15040 1411 aa13.9□□□□□ -0.18
RABGGTA-221ENST00000561055 CFAP70Q5T0N1 1121 aa13.9□□□□□ -0.18
RABGGTA-221ENST00000561055 LRPPRCP42704 1394 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-221ENST00000561055 ABCC11Q96J66 1382 aa13.89□□□□□ -0.19
RABGGTA-221ENST00000561055 PTCH1Q13635 1447 aa13.89□□□□□ -0.19
RABGGTA-221ENST00000561055 TONSLQ96HA7 1378 aa13.88□□□□□ -0.19
RABGGTA-221ENST00000561055 SIRT1Q96EB6 747 aa13.88□□□□□ -0.19
RABGGTA-221ENST00000561055 YTHDC2Q9H6S0 1430 aaKnown RBP13.88□□□□□ -0.19
RABGGTA-221ENST00000561055 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.87□□□□□ -0.19
RABGGTA-221ENST00000561055 DLC1Q96QB1 1528 aa13.87□□□□□ -0.19
RABGGTA-221ENST00000561055 PROSER2Q86WR7 435 aaPredicted RBP13.87□□□□□ -0.19
RABGGTA-221ENST00000561055 CCER1Q8TC90 406 aaPredicted RBP13.87□□□□□ -0.19
RABGGTA-221ENST00000561055 TMEM94Q12767 1356 aa13.86□□□□□ -0.19
RABGGTA-221ENST00000561055 NALCNQ8IZF0 1738 aa13.86□□□□□ -0.19
RABGGTA-221ENST00000561055 ARHGEF28Q8N1W1 1705 aaKnown RBP13.86□□□□□ -0.19
RABGGTA-221ENST00000561055 FAM135BQ49AJ0 1406 aa13.85□□□□□ -0.19
RABGGTA-221ENST00000561055 TMEM132EQ6IEE7 984 aa13.85□□□□□ -0.19
RABGGTA-221ENST00000561055 ROBO2Q9HCK4 1378 aa13.83□□□□□ -0.19
RABGGTA-221ENST00000561055 NBPF8Q3BBV2 869 aa13.82□□□□□ -0.2
RABGGTA-221ENST00000561055 DCCP43146 1447 aa13.81□□□□□ -0.2
RABGGTA-221ENST00000561055 C19orf44Q9H6X5 657 aa13.81□□□□□ -0.2
RABGGTA-221ENST00000561055 GPRASP1Q5JY77 1395 aa13.81□□□□□ -0.2
RABGGTA-221ENST00000561055 DISP3Q9P2K9 1392 aa13.81□□□□□ -0.2
RABGGTA-221ENST00000561055 ADGRL3Q9HAR2 1447 aa13.81□□□□□ -0.2
RABGGTA-221ENST00000561055 TOM1O60784 492 aa13.8□□□□□ -0.2
RABGGTA-221ENST00000561055 NBPF1Q3BBV0 1214 aa13.8□□□□□ -0.2
RABGGTA-221ENST00000561055 ILDR2Q71H61 639 aa13.8□□□□□ -0.2
RABGGTA-221ENST00000561055 MSH6P52701 1360 aa13.8□□□□□ -0.2
RABGGTA-221ENST00000561055 RALGAPBQ86X10 1494 aa13.8□□□□□ -0.2
RABGGTA-221ENST00000561055 RBM33Q96EV2 1170 aaKnown RBP13.79□□□□□ -0.2
RABGGTA-221ENST00000561055 STK26Q9P289 416 aa13.79□□□□□ -0.2
RABGGTA-221ENST00000561055 ADGRB2O60241 1585 aa13.78□□□□□ -0.2
RABGGTA-221ENST00000561055 CDC42BPGQ6DT37 1551 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms