RNA–Protein interactions for RNA: ENST00000561040.1

MEIS3-209, Transcript of Meis homeobox 3, humanhuman

TSL 2

Gene MEIS3, Length 1,809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-209ENST00000561040 POLR3GLQ9BT43 218 aa22.52■■□□□ 1.2
MEIS3-209ENST00000561040 CFAP65Q6ZU64 1925 aaKnown RBP22.52■■□□□ 1.2
MEIS3-209ENST00000561040 EIF3AQ14152 1382 aaKnown RBP22.51■■□□□ 1.19
MEIS3-209ENST00000561040 RPGRIP1LQ68CZ1 1315 aa22.51■■□□□ 1.19
MEIS3-209ENST00000561040 KTN1Q86UP2 1357 aaKnown RBP22.51■■□□□ 1.19
MEIS3-209ENST00000561040 SIGLEC1Q9BZZ2 1709 aa22.5■■□□□ 1.19
MEIS3-209ENST00000561040 PPP6R1Q9UPN7 881 aa22.5■■□□□ 1.19
MEIS3-209ENST00000561040 TMF1P82094 1093 aa22.49■■□□□ 1.19
MEIS3-209ENST00000561040 SLC24A1O60721 1099 aa22.48■■□□□ 1.19
MEIS3-209ENST00000561040 TESK2Q96S53 571 aa22.48■■□□□ 1.19
MEIS3-209ENST00000561040 SYNMO15061 1565 aa22.48■■□□□ 1.19
MEIS3-209ENST00000561040 SETBP1Q9Y6X0 1596 aa22.46■■□□□ 1.19
MEIS3-209ENST00000561040 PREX1Q8TCU6 1659 aa22.45■■□□□ 1.18
MEIS3-209ENST00000561040 ARHGEF40Q8TER5 1519 aa22.45■■□□□ 1.18
MEIS3-209ENST00000561040 CDCA8Q53HL2 280 aa22.44■■□□□ 1.18
MEIS3-209ENST00000561040 SLC52A1Q9NWF4 448 aa22.43■■□□□ 1.18
MEIS3-209ENST00000561040 DISP3Q9P2K9 1392 aa22.41■■□□□ 1.18
MEIS3-209ENST00000561040 MRS2Q9HD23 443 aa22.41■■□□□ 1.18
MEIS3-209ENST00000561040 ADGRF5Q8IZF2 1346 aa22.4■■□□□ 1.18
MEIS3-209ENST00000561040 CHGAP10645 457 aaKnown RBP22.4■■□□□ 1.18
MEIS3-209ENST00000561040 MYO3AQ8NEV4 1616 aa22.39■■□□□ 1.18
MEIS3-209ENST00000561040 PIK3C2GO75747 1445 aa22.39■■□□□ 1.17
MEIS3-209ENST00000561040 RALBP1Q15311 655 aa22.38■■□□□ 1.17
MEIS3-209ENST00000561040 NEXMIFQ5QGS0 1516 aa22.36■■□□□ 1.17
MEIS3-209ENST00000561040 CFAP70Q5T0N1 1121 aa22.36■■□□□ 1.17
MEIS3-209ENST00000561040 ZFYVE9O95405 1425 aa22.35■■□□□ 1.17
MEIS3-209ENST00000561040 VGFO15240 615 aaPredicted RBP22.34■■□□□ 1.17
MEIS3-209ENST00000561040 KDM5AP29375 1690 aaKnown RBP22.34■■□□□ 1.17
MEIS3-209ENST00000561040 CLTCQ00610 1675 aaKnown RBP22.34■■□□□ 1.17
MEIS3-209ENST00000561040 SBNO2Q9Y2G9 1366 aa22.33■■□□□ 1.17
MEIS3-209ENST00000561040 C14orf93Q9H972 538 aaKnown RBP22.33■■□□□ 1.16
MEIS3-209ENST00000561040 TMEM131LA2VDJ0 1609 aa22.33■■□□□ 1.16
MEIS3-209ENST00000561040 ERVK-7P63135 1459 aa22.33■■□□□ 1.16
MEIS3-209ENST00000561040 HNRNPUQ00839 825 aaKnown RBP eCLIP22.31■■□□□ 1.16
MEIS3-209ENST00000561040 MYBBP1AQ9BQG0 1328 aaKnown RBP22.31■■□□□ 1.16
MEIS3-209ENST00000561040 CCDC184Q52MB2 194 aa22.3■■□□□ 1.16
MEIS3-209ENST00000561040 ADGRB1O14514 1584 aa22.29■■□□□ 1.16
MEIS3-209ENST00000561040 IDI1Q13907 227 aa22.29■■□□□ 1.16
MEIS3-209ENST00000561040 BRD4O60885 1362 aaPredicted RBP22.29■■□□□ 1.16
MEIS3-209ENST00000561040 MYO5BQ9ULV0 1848 aa22.29■■□□□ 1.16
MEIS3-209ENST00000561040 SPATA31D1Q6ZQQ2 1576 aa22.28■■□□□ 1.16
MEIS3-209ENST00000561040 PER1O15534 1290 aaPredicted RBP22.28■■□□□ 1.16
MEIS3-209ENST00000561040 PARD3Q8TEW0 1356 aa22.28■■□□□ 1.16
MEIS3-209ENST00000561040 FAM9BQ8IZU0 186 aa22.25■■□□□ 1.15
MEIS3-209ENST00000561040 PANK3Q9H999 370 aa22.25■■□□□ 1.15
MEIS3-209ENST00000561040 MYOM1P52179 1685 aa22.25■■□□□ 1.15
MEIS3-209ENST00000561040 QRICH2Q9H0J4 1663 aa22.23■■□□□ 1.15
MEIS3-209ENST00000561040 TMC1Q8TDI8 760 aa22.23■■□□□ 1.15
MEIS3-209ENST00000561040 CENPJQ9HC77 1338 aaPredicted RBP22.23■■□□□ 1.15
MEIS3-209ENST00000561040 NLRP13Q86W25 1043 aa22.21■■□□□ 1.15
MEIS3-209ENST00000561040 ZBED9Q6R2W3 1325 aa22.21■■□□□ 1.15
MEIS3-209ENST00000561040 ESF1Q9H501 851 aaKnown RBP22.2■■□□□ 1.14
MEIS3-209ENST00000561040 ARHGEF28Q8N1W1 1705 aaKnown RBP22.19■■□□□ 1.14
MEIS3-209ENST00000561040 NPC1L1Q9UHC9 1359 aa22.17■■□□□ 1.14
MEIS3-209ENST00000561040 FBXO31Q5XUX0 539 aaPredicted RBP22.17■■□□□ 1.14
MEIS3-209ENST00000561040 KNSTRNQ9Y448 316 aa22.17■■□□□ 1.14
MEIS3-209ENST00000561040 CNGB1Q14028 1251 aaPredicted RBP22.17■■□□□ 1.14
MEIS3-209ENST00000561040 PNISRQ8TF01 805 aaKnown RBP22.17■■□□□ 1.14
MEIS3-209ENST00000561040 ASXL1Q8IXJ9 1541 aa22.16■■□□□ 1.14
MEIS3-209ENST00000561040 STAG3Q9UJ98 1225 aa22.15■■□□□ 1.14
MEIS3-209ENST00000561040 LRPPRCP42704 1394 aaKnown RBP22.15■■□□□ 1.14
MEIS3-209ENST00000561040 PUS7Q96PZ0 661 aaKnown RBP22.15■■□□□ 1.14
MEIS3-209ENST00000561040 TRAK1Q9UPV9 953 aa22.14■■□□□ 1.13
MEIS3-209ENST00000561040 A2ML1A8K2U0 1454 aa22.13■■□□□ 1.13
MEIS3-209ENST00000561040 MLECQ14165 292 aa22.13■■□□□ 1.13
MEIS3-209ENST00000561040 INSRP06213 1382 aa22.12■■□□□ 1.13
MEIS3-209ENST00000561040 ZMYM3Q14202 1370 aa22.12■■□□□ 1.13
MEIS3-209ENST00000561040 NEFLP07196 543 aa22.11■■□□□ 1.13
MEIS3-209ENST00000561040 CC2D1BQ5T0F9 858 aaKnown RBP22.1■■□□□ 1.13
MEIS3-209ENST00000561040 TMEM132EQ6IEE7 984 aa22.1■■□□□ 1.13
MEIS3-209ENST00000561040 SUPT16HQ9Y5B9 1047 aaKnown RBP22.09■■□□□ 1.13
MEIS3-209ENST00000561040 ALKQ9UM73 1620 aa22.08■■□□□ 1.13
MEIS3-209ENST00000561040 AMER1Q5JTC6 1135 aaPredicted RBP22.08■■□□□ 1.12
MEIS3-209ENST00000561040 NUTM2DQ5VT03 806 aaPredicted RBP22.08■■□□□ 1.12
MEIS3-209ENST00000561040 RIMS2Q9UQ26 1411 aa22.06■■□□□ 1.12
MEIS3-209ENST00000561040 EVC2Q86UK5 1308 aa22.06■■□□□ 1.12
MEIS3-209ENST00000561040 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.05■■□□□ 1.12
MEIS3-209ENST00000561040 TNRQ92752 1358 aa22.04■■□□□ 1.12
MEIS3-209ENST00000561040 HDGFP51858 240 aaKnown RBP22.03■■□□□ 1.12
MEIS3-209ENST00000561040 YTHDC2Q9H6S0 1430 aaKnown RBP22.03■■□□□ 1.12
MEIS3-209ENST00000561040 USP32Q8NFA0 1604 aa22.02■■□□□ 1.12
MEIS3-209ENST00000561040 DLC1Q96QB1 1528 aa22.01■■□□□ 1.11
MEIS3-209ENST00000561040 TULP4Q9NRJ4 1543 aa22.01■■□□□ 1.11
MEIS3-209ENST00000561040 NINLQ9Y2I6 1382 aa22.01■■□□□ 1.11
MEIS3-209ENST00000561040 PTPRMP28827 1452 aa22.01■■□□□ 1.11
MEIS3-209ENST00000561040 SETD1AO15047 1707 aaKnown RBP22■■□□□ 1.11
MEIS3-209ENST00000561040 UBR1Q8IWV7 1749 aa21.99■■□□□ 1.11
MEIS3-209ENST00000561040 PPP2R1AP30153 589 aa21.98■■□□□ 1.11
MEIS3-209ENST00000561040 SMG6Q86US8 1419 aaKnown RBP21.98■■□□□ 1.11
MEIS3-209ENST00000561040 NLRP1Q9C000 1473 aa21.98■■□□□ 1.11
MEIS3-209ENST00000561040 FKBP8Q14318 412 aa21.96■■□□□ 1.11
MEIS3-209ENST00000561040 BLMP54132 1417 aaPredicted RBP21.95■■□□□ 1.1
MEIS3-209ENST00000561040 FER1L4A9Z1Z3 1794 aa21.95■■□□□ 1.1
MEIS3-209ENST00000561040 NRXN3Q9Y4C0 1643 aa21.94■■□□□ 1.1
MEIS3-209ENST00000561040 TRHP20396 242 aaPredicted RBP21.94■■□□□ 1.1
MEIS3-209ENST00000561040 CARD14Q9BXL6 1004 aa21.94■■□□□ 1.1
MEIS3-209ENST00000561040 STK26Q9P289 416 aa21.94■■□□□ 1.1
MEIS3-209ENST00000561040 ATAD2Q6PL18 1390 aa21.94■■□□□ 1.1
MEIS3-209ENST00000561040 POGKQ9P215 609 aa21.93■■□□□ 1.1
MEIS3-209ENST00000561040 ANKRD36BQ8N2N9 1353 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms