RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 ZNF335Q9H4Z2 1342 aaPredicted RBP13.33□□□□□ -0.28
SNRPA1-214ENST00000560987 RAB3GAP2Q9H2M9 1393 aa13.32□□□□□ -0.28
SNRPA1-214ENST00000560987 SYNMO15061 1565 aa13.32□□□□□ -0.28
SNRPA1-214ENST00000560987 PIK3C2BO00750 1634 aa13.32□□□□□ -0.28
SNRPA1-214ENST00000560987 UBAP1LF5GYI3 381 aa13.32□□□□□ -0.28
SNRPA1-214ENST00000560987 IQSEC2Q5JU85 1478 aa13.31□□□□□ -0.28
SNRPA1-214ENST00000560987 UBR1Q8IWV7 1749 aa13.31□□□□□ -0.28
SNRPA1-214ENST00000560987 TMEM2Q9UHN6 1383 aa13.31□□□□□ -0.28
SNRPA1-214ENST00000560987 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.3□□□□□ -0.28
SNRPA1-214ENST00000560987 NPHP4O75161 1426 aaPredicted RBP13.3□□□□□ -0.28
SNRPA1-214ENST00000560987 LTBP4Q8N2S1 1624 aa13.28□□□□□ -0.28
SNRPA1-214ENST00000560987 TOM1O60784 492 aa13.28□□□□□ -0.28
SNRPA1-214ENST00000560987 HRCP23327 699 aa13.28□□□□□ -0.28
SNRPA1-214ENST00000560987 TRIM26Q12899 539 aaPredicted RBP13.28□□□□□ -0.28
SNRPA1-214ENST00000560987 SCAF11Q99590 1463 aaKnown RBP13.28□□□□□ -0.28
SNRPA1-214ENST00000560987 SLC26A8Q96RN1 970 aa13.27□□□□□ -0.29
SNRPA1-214ENST00000560987 POLR1AO95602 1720 aaPredicted RBP13.27□□□□□ -0.29
SNRPA1-214ENST00000560987 RGL3Q3MIN7 710 aa13.26□□□□□ -0.29
SNRPA1-214ENST00000560987 RIMS2Q9UQ26 1411 aa13.26□□□□□ -0.29
SNRPA1-214ENST00000560987 SPHKAPQ2M3C7 1700 aa13.25□□□□□ -0.29
SNRPA1-214ENST00000560987 ADGRB3O60242 1522 aa13.25□□□□□ -0.29
SNRPA1-214ENST00000560987 DISP3Q9P2K9 1392 aa13.25□□□□□ -0.29
SNRPA1-214ENST00000560987 SLIT1O75093 1534 aa13.24□□□□□ -0.29
SNRPA1-214ENST00000560987 MYO5BQ9ULV0 1848 aa13.24□□□□□ -0.29
SNRPA1-214ENST00000560987 MED14O60244 1454 aa13.23□□□□□ -0.29
SNRPA1-214ENST00000560987 ARHGAP23Q9P227 1491 aa13.23□□□□□ -0.29
SNRPA1-214ENST00000560987 TMEM131LA2VDJ0 1609 aa13.23□□□□□ -0.29
SNRPA1-214ENST00000560987 KDM5AP29375 1690 aaKnown RBP13.22□□□□□ -0.29
SNRPA1-214ENST00000560987 IQGAP1P46940 1657 aa13.22□□□□□ -0.29
SNRPA1-214ENST00000560987 VGFO15240 615 aaPredicted RBP13.22□□□□□ -0.29
SNRPA1-214ENST00000560987 PIP4K2BP78356 416 aa13.22□□□□□ -0.29
SNRPA1-214ENST00000560987 NEURL4Q96JN8 1562 aa13.22□□□□□ -0.29
SNRPA1-214ENST00000560987 CCDC144AA2RUR9 1427 aa13.22□□□□□ -0.29
SNRPA1-214ENST00000560987 KIF1BO60333 1816 aa13.2□□□□□ -0.3
SNRPA1-214ENST00000560987 CLTCL1P53675 1640 aa13.2□□□□□ -0.3
SNRPA1-214ENST00000560987 TRPM2O94759 1503 aa13.19□□□□□ -0.3
SNRPA1-214ENST00000560987 CPS1P31327 1500 aa13.19□□□□□ -0.3
SNRPA1-214ENST00000560987 PROSER2Q86WR7 435 aaPredicted RBP13.19□□□□□ -0.3
SNRPA1-214ENST00000560987 PLEKHG1Q9ULL1 1385 aa13.19□□□□□ -0.3
SNRPA1-214ENST00000560987 RPGRIP1LQ68CZ1 1315 aa13.18□□□□□ -0.3
SNRPA1-214ENST00000560987 KCNA6P17658 529 aa13.18□□□□□ -0.3
SNRPA1-214ENST00000560987 TBX22Q9Y458 520 aa13.18□□□□□ -0.3
SNRPA1-214ENST00000560987 ZFYVE9O95405 1425 aa13.18□□□□□ -0.3
SNRPA1-214ENST00000560987 RBM33Q96EV2 1170 aaKnown RBP13.15□□□□□ -0.3
SNRPA1-214ENST00000560987 C14orf37Q86TY3 774 aa13.14□□□□□ -0.31
SNRPA1-214ENST00000560987 KDM2AQ9Y2K7 1162 aa13.14□□□□□ -0.31
SNRPA1-214ENST00000560987 ANKRD30BQ9BXX2 1392 aa13.13□□□□□ -0.31
SNRPA1-214ENST00000560987 AMOTL2Q9Y2J4 779 aa13.13□□□□□ -0.31
SNRPA1-214ENST00000560987 HSPA1LP34931 641 aa13.12□□□□□ -0.31
SNRPA1-214ENST00000560987 PCGF6Q9BYE7 350 aa13.12□□□□□ -0.31
SNRPA1-214ENST00000560987 NEUROD1Q13562 356 aa13.11□□□□□ -0.31
SNRPA1-214ENST00000560987 DCAF11Q8TEB1 546 aa13.11□□□□□ -0.31
SNRPA1-214ENST00000560987 ADGRF5Q8IZF2 1346 aa13.11□□□□□ -0.31
SNRPA1-214ENST00000560987 NEXMIFQ5QGS0 1516 aa13.09□□□□□ -0.31
SNRPA1-214ENST00000560987 SOCS7O14512 581 aa13.09□□□□□ -0.31
SNRPA1-214ENST00000560987 ILDR2Q71H61 639 aa13.09□□□□□ -0.31
SNRPA1-214ENST00000560987 ADAMTS13Q76LX8 1427 aa13.09□□□□□ -0.31
SNRPA1-214ENST00000560987 STRCP1A6NGW2 1772 aa13.09□□□□□ -0.31
SNRPA1-214ENST00000560987 SPATA31E1Q6ZUB1 1445 aa13.08□□□□□ -0.32
SNRPA1-214ENST00000560987 STK26Q9P289 416 aa13.08□□□□□ -0.32
SNRPA1-214ENST00000560987 LRRC7Q96NW7 1537 aa13.08□□□□□ -0.32
SNRPA1-214ENST00000560987 TMEM94Q12767 1356 aa13.07□□□□□ -0.32
SNRPA1-214ENST00000560987 METP08581 1390 aa13.07□□□□□ -0.32
SNRPA1-214ENST00000560987 PIK3R4Q99570 1358 aa13.07□□□□□ -0.32
SNRPA1-214ENST00000560987 TMEM132EQ6IEE7 984 aa13.06□□□□□ -0.32
SNRPA1-214ENST00000560987 SIN3AQ96ST3 1273 aa13.06□□□□□ -0.32
SNRPA1-214ENST00000560987 CHD2O14647 1828 aaKnown RBP13.06□□□□□ -0.32
SNRPA1-214ENST00000560987 PPLO60437 1756 aa13.04□□□□□ -0.32
SNRPA1-214ENST00000560987 DIP2AQ14689 1571 aa13.04□□□□□ -0.32
SNRPA1-214ENST00000560987 ATF3P18847 181 aa13.04□□□□□ -0.32
SNRPA1-214ENST00000560987 CFAP70Q5T0N1 1121 aa13.04□□□□□ -0.32
SNRPA1-214ENST00000560987 SETBP1Q9Y6X0 1596 aa13.03□□□□□ -0.32
SNRPA1-214ENST00000560987 STAC3Q96MF2 364 aa13.03□□□□□ -0.32
SNRPA1-214ENST00000560987 C19orf44Q9H6X5 657 aa13.03□□□□□ -0.32
SNRPA1-214ENST00000560987 MSH6P52701 1360 aa13.03□□□□□ -0.32
SNRPA1-214ENST00000560987 PTPRUQ92729 1446 aa13.03□□□□□ -0.32
SNRPA1-214ENST00000560987 ALKQ9UM73 1620 aa13.02□□□□□ -0.32
SNRPA1-214ENST00000560987 C14orf93Q9H972 538 aaKnown RBP13.02□□□□□ -0.33
SNRPA1-214ENST00000560987 SLAIN2Q9P270 581 aa13.01□□□□□ -0.33
SNRPA1-214ENST00000560987 NRXN3Q9Y4C0 1643 aa13□□□□□ -0.33
SNRPA1-214ENST00000560987 NKTRP30414 1462 aaKnown RBP13□□□□□ -0.33
SNRPA1-214ENST00000560987 DHX57Q6P158 1386 aaKnown RBP13□□□□□ -0.33
SNRPA1-214ENST00000560987 CADPS2Q86UW7 1296 aa12.99□□□□□ -0.33
SNRPA1-214ENST00000560987 WAPLQ7Z5K2 1190 aa12.98□□□□□ -0.33
SNRPA1-214ENST00000560987 L3MBTL2Q969R5 705 aa12.98□□□□□ -0.33
SNRPA1-214ENST00000560987 POGKQ9P215 609 aa12.98□□□□□ -0.33
SNRPA1-214ENST00000560987 NWD1Q149M9 1564 aa12.98□□□□□ -0.33
SNRPA1-214ENST00000560987 NCOA3Q9Y6Q9 1424 aa12.97□□□□□ -0.33
SNRPA1-214ENST00000560987 XIRP1Q702N8 1843 aaKnown RBP12.97□□□□□ -0.33
SNRPA1-214ENST00000560987 PIK3C2GO75747 1445 aa12.96□□□□□ -0.33
SNRPA1-214ENST00000560987 FAM135BQ49AJ0 1406 aa12.96□□□□□ -0.33
SNRPA1-214ENST00000560987 IFT172Q9UG01 1749 aa12.96□□□□□ -0.33
SNRPA1-214ENST00000560987 SAFB2Q14151 953 aaKnown RBP eCLIP12.96□□□□□ -0.33
SNRPA1-214ENST00000560987 TRAK1Q9UPV9 953 aa12.96□□□□□ -0.33
SNRPA1-214ENST00000560987 LRPPRCP42704 1394 aaKnown RBP12.94□□□□□ -0.34
SNRPA1-214ENST00000560987 ROBO2Q9HCK4 1378 aa12.94□□□□□ -0.34
SNRPA1-214ENST00000560987 MYOM2P54296 1465 aa12.94□□□□□ -0.34
SNRPA1-214ENST00000560987 ABCC11Q96J66 1382 aa12.94□□□□□ -0.34
SNRPA1-214ENST00000560987 CCER1Q8TC90 406 aaPredicted RBP12.93□□□□□ -0.34
SNRPA1-214ENST00000560987 YTHDC2Q9H6S0 1430 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms