RNA–Protein interactions for RNA: ENST00000560986.1

HMG20A-212, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-212ENST00000560986 NPDC1Q9NQX5 325 aaPredicted RBP9.54□□□□□ -0.88
HMG20A-212ENST00000560986 PNMA3Q9UL41 463 aa9.54□□□□□ -0.88
HMG20A-212ENST00000560986 ZMYND10O75800 440 aa9.53□□□□□ -0.88
HMG20A-212ENST00000560986 NUDT18Q6ZVK8 323 aa9.53□□□□□ -0.88
HMG20A-212ENST00000560986 NBPF26B4DH59 902 aa9.52□□□□□ -0.89
HMG20A-212ENST00000560986 TJAP1Q5JTD0 557 aa9.52□□□□□ -0.89
HMG20A-212ENST00000560986 GPIHBP1Q8IV16 184 aa9.52□□□□□ -0.89
HMG20A-212ENST00000560986 TTC13Q8NBP0 860 aa9.52□□□□□ -0.89
HMG20A-212ENST00000560986 WIZO95785 1651 aa9.51□□□□□ -0.89
HMG20A-212ENST00000560986 RBM27Q9P2N5 1060 aaKnown RBP9.51□□□□□ -0.89
HMG20A-212ENST00000560986 SLC24A3Q9HC58 644 aa9.5□□□□□ -0.89
HMG20A-212ENST00000560986 ATAD2BQ9ULI0 1458 aa9.48□□□□□ -0.89
HMG20A-212ENST00000560986 HMGXB3Q12766 1538 aa9.48□□□□□ -0.89
HMG20A-212ENST00000560986 PADI6Q6TGC4 694 aa9.48□□□□□ -0.89
HMG20A-212ENST00000560986 BARGINQ6ZT62 677 aa9.48□□□□□ -0.89
HMG20A-212ENST00000560986 NCAPD3P42695 1498 aa9.47□□□□□ -0.89
HMG20A-212ENST00000560986 MTRQ99707 1265 aa9.47□□□□□ -0.89
HMG20A-212ENST00000560986 APLP1P51693 650 aa9.46□□□□□ -0.9
HMG20A-212ENST00000560986 EIF4G1Q04637 1599 aaKnown RBP9.46□□□□□ -0.9
HMG20A-212ENST00000560986 RNF40O75150 1001 aa9.44□□□□□ -0.9
HMG20A-212ENST00000560986 HDGFP51858 240 aaKnown RBP9.44□□□□□ -0.9
HMG20A-212ENST00000560986 ZNF516Q92618 1163 aa9.44□□□□□ -0.9
HMG20A-212ENST00000560986 BAZ1BQ9UIG0 1483 aaKnown RBP9.43□□□□□ -0.9
HMG20A-212ENST00000560986 BRPF1P55201 1214 aaPredicted RBP9.43□□□□□ -0.9
HMG20A-212ENST00000560986 SWT1Q5T5J6 900 aaKnown RBP9.43□□□□□ -0.9
HMG20A-212ENST00000560986 EYA1Q99502 592 aa9.43□□□□□ -0.9
HMG20A-212ENST00000560986 IL21Q9HBE4 155 aa9.43□□□□□ -0.9
HMG20A-212ENST00000560986 GPR37O15354 613 aa9.41□□□□□ -0.9
HMG20A-212ENST00000560986 PPP1R18Q6NYC8 613 aa9.41□□□□□ -0.9
HMG20A-212ENST00000560986 NUTM2FA1L443 756 aa9.4□□□□□ -0.9
HMG20A-212ENST00000560986 TMEM132AQ24JP5 1023 aa9.4□□□□□ -0.9
HMG20A-212ENST00000560986 KRI1Q8N9T8 703 aaKnown RBP9.4□□□□□ -0.9
HMG20A-212ENST00000560986 CCDC88BA6NC98 1476 aa9.4□□□□□ -0.91
HMG20A-212ENST00000560986 NEUROD2Q15784 382 aa9.39□□□□□ -0.91
HMG20A-212ENST00000560986 NKX2-3Q8TAU0 364 aa9.39□□□□□ -0.91
HMG20A-212ENST00000560986 AK7Q96M32 723 aa9.39□□□□□ -0.91
HMG20A-212ENST00000560986 PTGDRQ13258 359 aa9.38□□□□□ -0.91
HMG20A-212ENST00000560986 Q6ZNB5 142 aa9.38□□□□□ -0.91
HMG20A-212ENST00000560986 SLF2Q8IX21 1173 aa9.38□□□□□ -0.91
HMG20A-212ENST00000560986 PRKD2Q9BZL6 878 aa9.37□□□□□ -0.91
HMG20A-212ENST00000560986 COPS2P61201 443 aa9.36□□□□□ -0.91
HMG20A-212ENST00000560986 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.35□□□□□ -0.91
HMG20A-212ENST00000560986 LCE2BO14633 110 aa9.34□□□□□ -0.91
HMG20A-212ENST00000560986 FCHSD2O94868 740 aa9.34□□□□□ -0.91
HMG20A-212ENST00000560986 NECTIN2Q92692 538 aa9.34□□□□□ -0.91
HMG20A-212ENST00000560986 GNPATO15228 680 aa9.33□□□□□ -0.92
HMG20A-212ENST00000560986 GFRA3O60609 400 aa9.33□□□□□ -0.92
HMG20A-212ENST00000560986 HIC1Q14526 733 aa9.33□□□□□ -0.92
HMG20A-212ENST00000560986 ADGRG1Q9Y653 693 aa9.33□□□□□ -0.92
HMG20A-212ENST00000560986 TRIM66O15016 1216 aa9.32□□□□□ -0.92
HMG20A-212ENST00000560986 FAM161AQ3B820 660 aa9.32□□□□□ -0.92
HMG20A-212ENST00000560986 MINK1Q8N4C8 1332 aaPredicted RBP9.31□□□□□ -0.92
HMG20A-212ENST00000560986 ZPR1O75312 459 aa9.31□□□□□ -0.92
HMG20A-212ENST00000560986 MAP2K5Q13163 448 aa9.31□□□□□ -0.92
HMG20A-212ENST00000560986 LAPTM4AQ15012 233 aa9.31□□□□□ -0.92
HMG20A-212ENST00000560986 V9GY48 417 aaPredicted RBP9.31□□□□□ -0.92
HMG20A-212ENST00000560986 DNAJB2P25686 324 aa9.3□□□□□ -0.92
HMG20A-212ENST00000560986 TMEM134Q9H6X4 195 aa9.3□□□□□ -0.92
HMG20A-212ENST00000560986 RBM46Q8TBY0 533 aaKnown RBP9.29□□□□□ -0.92
HMG20A-212ENST00000560986 RCCD1A6NED2 376 aa9.28□□□□□ -0.92
HMG20A-212ENST00000560986 IRF6O14896 467 aa9.28□□□□□ -0.92
HMG20A-212ENST00000560986 FECHP22830 423 aa9.28□□□□□ -0.92
HMG20A-212ENST00000560986 SLC4A3P48751 1232 aa9.28□□□□□ -0.92
HMG20A-212ENST00000560986 PDE4DQ08499 809 aa9.28□□□□□ -0.92
HMG20A-212ENST00000560986 BLOC1S3Q6QNY0 202 aa9.28□□□□□ -0.92
HMG20A-212ENST00000560986 CCDC102AQ96A19 550 aa9.28□□□□□ -0.92
HMG20A-212ENST00000560986 GPBP1L1Q9HC44 474 aaPredicted RBP9.28□□□□□ -0.92
HMG20A-212ENST00000560986 PCDHB3Q9Y5E6 796 aa9.28□□□□□ -0.92
HMG20A-212ENST00000560986 GTF3C3Q9Y5Q9 886 aa9.28□□□□□ -0.92
HMG20A-212ENST00000560986 EEA1Q15075 1411 aa9.26□□□□□ -0.93
HMG20A-212ENST00000560986 TRAF7Q6Q0C0 670 aa9.26□□□□□ -0.93
HMG20A-212ENST00000560986 TMUB1Q9BVT8 246 aa9.26□□□□□ -0.93
HMG20A-212ENST00000560986 PRR14Q9BWN1 585 aa9.26□□□□□ -0.93
HMG20A-212ENST00000560986 NRG2O14511 850 aaPredicted RBP9.25□□□□□ -0.93
HMG20A-212ENST00000560986 CFTRP13569 1480 aa9.25□□□□□ -0.93
HMG20A-212ENST00000560986 CC2D2AQ9P2K1 1620 aa9.24□□□□□ -0.93
HMG20A-212ENST00000560986 SLC10A3P09131 477 aa9.24□□□□□ -0.93
HMG20A-212ENST00000560986 GGCXP38435 758 aa9.24□□□□□ -0.93
HMG20A-212ENST00000560986 KDM4CQ9H3R0 1056 aa9.24□□□□□ -0.93
HMG20A-212ENST00000560986 RNF223E7ERA6 249 aa9.23□□□□□ -0.93
HMG20A-212ENST00000560986 ACTN4O43707 911 aaKnown RBP9.23□□□□□ -0.93
HMG20A-212ENST00000560986 TLL1O43897 1013 aa9.23□□□□□ -0.93
HMG20A-212ENST00000560986 EMID1Q96A84 441 aaPredicted RBP9.23□□□□□ -0.93
HMG20A-212ENST00000560986 CFHP08603 1231 aa9.21□□□□□ -0.94
HMG20A-212ENST00000560986 AMHR2Q16671 573 aa9.21□□□□□ -0.94
HMG20A-212ENST00000560986 PXYLP1Q8TE99 480 aa9.21□□□□□ -0.94
HMG20A-212ENST00000560986 PDZRN3Q9UPQ7 1066 aa9.21□□□□□ -0.94
HMG20A-212ENST00000560986 WRNQ14191 1432 aaPredicted RBP eCLIP9.21□□□□□ -0.94
HMG20A-212ENST00000560986 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.2□□□□□ -0.94
HMG20A-212ENST00000560986 KMT5BQ4FZB7 885 aa9.19□□□□□ -0.94
HMG20A-212ENST00000560986 DAXXQ9UER7 740 aaPredicted RBP9.19□□□□□ -0.94
HMG20A-212ENST00000560986 PPEF1O14829 653 aaPredicted RBP9.18□□□□□ -0.94
HMG20A-212ENST00000560986 OATP04181 439 aa9.18□□□□□ -0.94
HMG20A-212ENST00000560986 PRDM2Q13029 1718 aa9.18□□□□□ -0.94
HMG20A-212ENST00000560986 TRIM67Q6ZTA4 783 aa9.18□□□□□ -0.94
HMG20A-212ENST00000560986 CADPSQ9ULU8 1353 aa9.18□□□□□ -0.94
HMG20A-212ENST00000560986 S1PR4O95977 384 aa9.17□□□□□ -0.94
HMG20A-212ENST00000560986 SLC19A1P41440 591 aa9.17□□□□□ -0.94
HMG20A-212ENST00000560986 METTL3Q86U44 580 aaKnown RBP9.17□□□□□ -0.94
HMG20A-212ENST00000560986 PARP9Q8IXQ6 854 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms