RNA–Protein interactions for RNA: ENST00000560867.1

HMG20A-211, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-211ENST00000560867 SSTR3P32745 418 aaPredicted RBP11.08□□□□□ -0.64
HMG20A-211ENST00000560867 DIXDC1Q155Q3 683 aa11.08□□□□□ -0.64
HMG20A-211ENST00000560867 REPIN1Q9BWE0 567 aaKnown RBP11.08□□□□□ -0.64
HMG20A-211ENST00000560867 POTEMA6NI47 508 aa11.07□□□□□ -0.64
HMG20A-211ENST00000560867 SLF2Q8IX21 1173 aa11.07□□□□□ -0.64
HMG20A-211ENST00000560867 STAC3Q96MF2 364 aa11.07□□□□□ -0.64
HMG20A-211ENST00000560867 KRTAP3-3Q9BYR6 98 aa11.07□□□□□ -0.64
HMG20A-211ENST00000560867 KRTAP3-2Q9BYR7 98 aa11.07□□□□□ -0.64
HMG20A-211ENST00000560867 SEPT9Q9UHD8 586 aaPredicted RBP11.07□□□□□ -0.64
HMG20A-211ENST00000560867 GOPCQ9HD26 462 aa11.06□□□□□ -0.64
HMG20A-211ENST00000560867 PCDH10Q9P2E7 1040 aa11.06□□□□□ -0.64
HMG20A-211ENST00000560867 MS4A1P11836 297 aa11.05□□□□□ -0.64
HMG20A-211ENST00000560867 ANKRD13DQ6ZTN6 518 aa11.05□□□□□ -0.64
HMG20A-211ENST00000560867 CD46P15529 392 aa11.04□□□□□ -0.64
HMG20A-211ENST00000560867 ZFRQ96KR1 1074 aaKnown RBP11.04□□□□□ -0.64
HMG20A-211ENST00000560867 FAM117AQ9C073 453 aa11.03□□□□□ -0.64
HMG20A-211ENST00000560867 RSPH6AQ9H0K4 717 aa11.03□□□□□ -0.64
HMG20A-211ENST00000560867 SWT1Q5T5J6 900 aaKnown RBP11.02□□□□□ -0.65
HMG20A-211ENST00000560867 CDAN1Q8IWY9 1227 aa11.02□□□□□ -0.65
HMG20A-211ENST00000560867 NLRP7Q8WX94 980 aa11.02□□□□□ -0.65
HMG20A-211ENST00000560867 ANKK1Q8NFD2 765 aa11.01□□□□□ -0.65
HMG20A-211ENST00000560867 BEGAINQ9BUH8 593 aa11.01□□□□□ -0.65
HMG20A-211ENST00000560867 PLEKHG3A1L390 1219 aa11□□□□□ -0.65
HMG20A-211ENST00000560867 GOLGA8CPA6NN73 597 aa11□□□□□ -0.65
HMG20A-211ENST00000560867 LRCH3Q96II8 777 aa11□□□□□ -0.65
HMG20A-211ENST00000560867 DDX11L8A8MPP1 907 aa10.99□□□□□ -0.65
HMG20A-211ENST00000560867 SAMD7Q7Z3H4 446 aa10.99□□□□□ -0.65
HMG20A-211ENST00000560867 SH3D19Q5HYK7 790 aa10.98□□□□□ -0.65
HMG20A-211ENST00000560867 IL27Q8NEV9 243 aa10.98□□□□□ -0.65
HMG20A-211ENST00000560867 PRR14Q9BWN1 585 aa10.98□□□□□ -0.65
HMG20A-211ENST00000560867 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.98□□□□□ -0.65
HMG20A-211ENST00000560867 USP46P62068 366 aa10.97□□□□□ -0.65
HMG20A-211ENST00000560867 RDH13Q8NBN7 331 aa10.96□□□□□ -0.65
HMG20A-211ENST00000560867 SOWAHBA6NEL2 793 aa10.95□□□□□ -0.66
HMG20A-211ENST00000560867 GJA5P36382 358 aa10.95□□□□□ -0.66
HMG20A-211ENST00000560867 GCGRP47871 477 aa10.95□□□□□ -0.66
HMG20A-211ENST00000560867 KMT5BQ4FZB7 885 aa10.93□□□□□ -0.66
HMG20A-211ENST00000560867 NUTM1Q86Y26 1132 aa10.93□□□□□ -0.66
HMG20A-211ENST00000560867 WNT2BQ93097 391 aa10.93□□□□□ -0.66
HMG20A-211ENST00000560867 SLC10A3P09131 477 aa10.92□□□□□ -0.66
HMG20A-211ENST00000560867 SKIV2LQ15477 1246 aaKnown RBP10.92□□□□□ -0.66
HMG20A-211ENST00000560867 TUSC1Q2TAM9 212 aa10.92□□□□□ -0.66
HMG20A-211ENST00000560867 NYAP1Q6ZVC0 841 aa10.92□□□□□ -0.66
HMG20A-211ENST00000560867 KDM4AO75164 1064 aa10.91□□□□□ -0.66
HMG20A-211ENST00000560867 GRIPAP1Q4V328 841 aa10.91□□□□□ -0.66
HMG20A-211ENST00000560867 TBC1D2Q9BYX2 928 aa10.91□□□□□ -0.66
HMG20A-211ENST00000560867 TSR3Q9UJK0 312 aaKnown RBP10.91□□□□□ -0.66
HMG20A-211ENST00000560867 SPIRE2Q8WWL2 714 aa10.9□□□□□ -0.66
HMG20A-211ENST00000560867 PCMTD1Q96MG8 357 aaPredicted RBP10.9□□□□□ -0.66
HMG20A-211ENST00000560867 CFHP08603 1231 aa10.89□□□□□ -0.67
HMG20A-211ENST00000560867 MYSM1Q5VVJ2 828 aa10.89□□□□□ -0.67
HMG20A-211ENST00000560867 RNF40O75150 1001 aa10.88□□□□□ -0.67
HMG20A-211ENST00000560867 PPP4CP60510 307 aa10.88□□□□□ -0.67
HMG20A-211ENST00000560867 ACTN4O43707 911 aaKnown RBP10.87□□□□□ -0.67
HMG20A-211ENST00000560867 CLK2P49760 499 aaKnown RBP10.87□□□□□ -0.67
HMG20A-211ENST00000560867 THSD4Q6ZMP0 1018 aa10.87□□□□□ -0.67
HMG20A-211ENST00000560867 SPTLC1O15269 473 aa10.86□□□□□ -0.67
HMG20A-211ENST00000560867 HPS5Q9UPZ3 1129 aa10.86□□□□□ -0.67
HMG20A-211ENST00000560867 HOXA2O43364 376 aa10.85□□□□□ -0.67
HMG20A-211ENST00000560867 ATP6V1AP38606 617 aa10.84□□□□□ -0.67
HMG20A-211ENST00000560867 BCAMP50895 628 aa10.84□□□□□ -0.67
HMG20A-211ENST00000560867 RSBN1LQ6PCB5 846 aaPredicted RBP10.84□□□□□ -0.67
HMG20A-211ENST00000560867 ERICH6Q7L0X2 663 aa10.84□□□□□ -0.67
HMG20A-211ENST00000560867 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.83□□□□□ -0.68
HMG20A-211ENST00000560867 MYT1LQ9UL68 1186 aa10.83□□□□□ -0.68
HMG20A-211ENST00000560867 PRPF38BQ5VTL8 546 aaKnown RBP10.82□□□□□ -0.68
HMG20A-211ENST00000560867 RIC3Q7Z5B4 369 aa10.82□□□□□ -0.68
HMG20A-211ENST00000560867 KCTD12Q96CX2 325 aaKnown RBP10.81□□□□□ -0.68
HMG20A-211ENST00000560867 GTF3C3Q9Y5Q9 886 aa10.81□□□□□ -0.68
HMG20A-211ENST00000560867 FUT2Q10981 343 aa10.8□□□□□ -0.68
HMG20A-211ENST00000560867 MOXD2PA6NHM9 499 aa10.79□□□□□ -0.68
HMG20A-211ENST00000560867 FDX1P10109 184 aa10.79□□□□□ -0.68
HMG20A-211ENST00000560867 SPDYE5A6NIY4 337 aa10.78□□□□□ -0.68
HMG20A-211ENST00000560867 PPP2R2DQ66LE6 453 aa10.78□□□□□ -0.68
HMG20A-211ENST00000560867 Q3C1V9 767 aa10.77□□□□□ -0.69
HMG20A-211ENST00000560867 POLR3EQ9NVU0 708 aa10.77□□□□□ -0.69
HMG20A-211ENST00000560867 WBP1LQ9NX94 342 aa10.77□□□□□ -0.69
HMG20A-211ENST00000560867 SALL2Q9Y467 1007 aaPredicted RBP10.77□□□□□ -0.69
HMG20A-211ENST00000560867 APLP1P51693 650 aa10.76□□□□□ -0.69
HMG20A-211ENST00000560867 MORN1Q5T089 497 aa10.76□□□□□ -0.69
HMG20A-211ENST00000560867 ZBTB3Q9H5J0 574 aa10.76□□□□□ -0.69
HMG20A-211ENST00000560867 LIMD1Q9UGP4 676 aa10.76□□□□□ -0.69
HMG20A-211ENST00000560867 PCDHB3Q9Y5E6 796 aa10.76□□□□□ -0.69
HMG20A-211ENST00000560867 NR1I2O75469 434 aa10.74□□□□□ -0.69
HMG20A-211ENST00000560867 SPNS2Q8IVW8 549 aa10.74□□□□□ -0.69
HMG20A-211ENST00000560867 LILRB3O75022 631 aa10.73□□□□□ -0.69
HMG20A-211ENST00000560867 NDUFV2P19404 249 aa10.73□□□□□ -0.69
HMG20A-211ENST00000560867 RNF166Q96A37 237 aaPredicted RBP10.73□□□□□ -0.69
HMG20A-211ENST00000560867 HCSTQ9UBK5 93 aa10.73□□□□□ -0.69
HMG20A-211ENST00000560867 SOCS7O14512 581 aa10.72□□□□□ -0.69
HMG20A-211ENST00000560867 MTMR2Q13614 643 aa10.72□□□□□ -0.69
HMG20A-211ENST00000560867 TMEM259Q4ZIN3 620 aa10.72□□□□□ -0.69
HMG20A-211ENST00000560867 PROCA1Q8NCQ7 364 aaPredicted RBP10.72□□□□□ -0.69
HMG20A-211ENST00000560867 FLIIQ13045 1269 aa10.71□□□□□ -0.69
HMG20A-211ENST00000560867 BANK1Q8NDB2 785 aa10.71□□□□□ -0.69
HMG20A-211ENST00000560867 ATP1B4Q9UN42 357 aaPredicted RBP10.71□□□□□ -0.69
HMG20A-211ENST00000560867 RETREG3Q86VR2 466 aa10.69□□□□□ -0.7
HMG20A-211ENST00000560867 PCDHGC3Q9UN70 934 aa10.69□□□□□ -0.7
HMG20A-211ENST00000560867 SLC27A5Q9Y2P5 690 aa10.69□□□□□ -0.7
HMG20A-211ENST00000560867 HRCP23327 699 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms