RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 ACIN1Q9UKV3 1341 aaKnown RBP10.46□□□□□ -0.73
CTDSPL2-210ENST00000560834 WASHC2CQ9Y4E1 1318 aa10.46□□□□□ -0.73
CTDSPL2-210ENST00000560834 DHX57Q6P158 1386 aaKnown RBP10.46□□□□□ -0.74
CTDSPL2-210ENST00000560834 NOS1P29475 1434 aa10.46□□□□□ -0.74
CTDSPL2-210ENST00000560834 CLTCL1P53675 1640 aa10.46□□□□□ -0.74
CTDSPL2-210ENST00000560834 UGGT1Q9NYU2 1555 aa10.45□□□□□ -0.74
CTDSPL2-210ENST00000560834 TRIM52Q96A61 297 aa10.45□□□□□ -0.74
CTDSPL2-210ENST00000560834 PLA2R1Q13018 1463 aa10.44□□□□□ -0.74
CTDSPL2-210ENST00000560834 PTPRTO14522 1441 aa10.44□□□□□ -0.74
CTDSPL2-210ENST00000560834 ZMYM3Q14202 1370 aa10.44□□□□□ -0.74
CTDSPL2-210ENST00000560834 CFAP65Q6ZU64 1925 aaKnown RBP10.44□□□□□ -0.74
CTDSPL2-210ENST00000560834 MPHOSPH9Q99550 1183 aa10.43□□□□□ -0.74
CTDSPL2-210ENST00000560834 KDM5AP29375 1690 aaKnown RBP10.42□□□□□ -0.74
CTDSPL2-210ENST00000560834 UBR1Q8IWV7 1749 aa10.41□□□□□ -0.74
CTDSPL2-210ENST00000560834 CEP170BQ9Y4F5 1589 aaPredicted RBP10.41□□□□□ -0.74
CTDSPL2-210ENST00000560834 PKD2Q13563 968 aa10.41□□□□□ -0.74
CTDSPL2-210ENST00000560834 ESF1Q9H501 851 aaKnown RBP10.41□□□□□ -0.74
CTDSPL2-210ENST00000560834 MYO5BQ9ULV0 1848 aa10.41□□□□□ -0.74
CTDSPL2-210ENST00000560834 ADGRB3O60242 1522 aa10.41□□□□□ -0.74
CTDSPL2-210ENST00000560834 TMEM131LA2VDJ0 1609 aa10.4□□□□□ -0.75
CTDSPL2-210ENST00000560834 KIF1BO60333 1816 aa10.4□□□□□ -0.75
CTDSPL2-210ENST00000560834 TNRQ92752 1358 aa10.39□□□□□ -0.75
CTDSPL2-210ENST00000560834 CEBPAP49715 358 aaPredicted RBP10.39□□□□□ -0.75
CTDSPL2-210ENST00000560834 NEURL4Q96JN8 1562 aa10.39□□□□□ -0.75
CTDSPL2-210ENST00000560834 ANKRD30BQ9BXX2 1392 aa10.39□□□□□ -0.75
CTDSPL2-210ENST00000560834 IFT172Q9UG01 1749 aa10.38□□□□□ -0.75
CTDSPL2-210ENST00000560834 NLRP1Q9C000 1473 aa10.38□□□□□ -0.75
CTDSPL2-210ENST00000560834 FBXO31Q5XUX0 539 aaPredicted RBP10.38□□□□□ -0.75
CTDSPL2-210ENST00000560834 C19orf67A6NJJ6 358 aa10.37□□□□□ -0.75
CTDSPL2-210ENST00000560834 A2ML1A8K2U0 1454 aa10.36□□□□□ -0.75
CTDSPL2-210ENST00000560834 LMTK3Q96Q04 1460 aa10.36□□□□□ -0.75
CTDSPL2-210ENST00000560834 CCDC144AA2RUR9 1427 aa10.35□□□□□ -0.75
CTDSPL2-210ENST00000560834 PPLO60437 1756 aa10.34□□□□□ -0.75
CTDSPL2-210ENST00000560834 UHRF1BP1Q6BDS2 1440 aa10.34□□□□□ -0.75
CTDSPL2-210ENST00000560834 SETD1BQ9UPS6 1966 aaKnown RBP10.34□□□□□ -0.75
CTDSPL2-210ENST00000560834 POTEMA6NI47 508 aa10.34□□□□□ -0.75
CTDSPL2-210ENST00000560834 SPATA31E1Q6ZUB1 1445 aa10.33□□□□□ -0.76
CTDSPL2-210ENST00000560834 NEXMIFQ5QGS0 1516 aa10.33□□□□□ -0.76
CTDSPL2-210ENST00000560834 POLR1AO95602 1720 aaPredicted RBP10.33□□□□□ -0.76
CTDSPL2-210ENST00000560834 SLIT1O75093 1534 aa10.32□□□□□ -0.76
CTDSPL2-210ENST00000560834 ARHGAP23Q9P227 1491 aa10.31□□□□□ -0.76
CTDSPL2-210ENST00000560834 PCDH10Q9P2E7 1040 aa10.31□□□□□ -0.76
CTDSPL2-210ENST00000560834 ZBTB12Q9Y330 459 aaPredicted RBP10.31□□□□□ -0.76
CTDSPL2-210ENST00000560834 CLSPNQ9HAW4 1339 aa10.31□□□□□ -0.76
CTDSPL2-210ENST00000560834 IDI1Q13907 227 aa10.3□□□□□ -0.76
CTDSPL2-210ENST00000560834 SLC52A1Q9NWF4 448 aa10.3□□□□□ -0.76
CTDSPL2-210ENST00000560834 ZFYVE9O95405 1425 aa10.3□□□□□ -0.76
CTDSPL2-210ENST00000560834 IQGAP1P46940 1657 aa10.28□□□□□ -0.76
CTDSPL2-210ENST00000560834 STRCQ7RTU9 1775 aa10.28□□□□□ -0.76
CTDSPL2-210ENST00000560834 NRXN3Q9Y4C0 1643 aa10.28□□□□□ -0.76
CTDSPL2-210ENST00000560834 MYOM2P54296 1465 aa10.28□□□□□ -0.76
CTDSPL2-210ENST00000560834 SETD1AO15047 1707 aaKnown RBP10.27□□□□□ -0.76
CTDSPL2-210ENST00000560834 PRKAR2AP13861 404 aaKnown RBP10.27□□□□□ -0.77
CTDSPL2-210ENST00000560834 POTEGQ6S5H5 508 aa10.27□□□□□ -0.77
CTDSPL2-210ENST00000560834 CCER1Q8TC90 406 aaPredicted RBP10.27□□□□□ -0.77
CTDSPL2-210ENST00000560834 SIN3AQ96ST3 1273 aa10.26□□□□□ -0.77
CTDSPL2-210ENST00000560834 TMEM2Q9UHN6 1383 aa10.26□□□□□ -0.77
CTDSPL2-210ENST00000560834 RIMS2Q9UQ26 1411 aa10.25□□□□□ -0.77
CTDSPL2-210ENST00000560834 SCAF11Q99590 1463 aaKnown RBP10.25□□□□□ -0.77
CTDSPL2-210ENST00000560834 NRXN1Q9ULB1 1477 aa10.25□□□□□ -0.77
CTDSPL2-210ENST00000560834 SETBP1Q9Y6X0 1596 aa10.25□□□□□ -0.77
CTDSPL2-210ENST00000560834 LAMC1P11047 1609 aa10.25□□□□□ -0.77
CTDSPL2-210ENST00000560834 TRPM1Q7Z4N2 1603 aa10.23□□□□□ -0.77
CTDSPL2-210ENST00000560834 SLC24A1O60721 1099 aa10.23□□□□□ -0.77
CTDSPL2-210ENST00000560834 MED14O60244 1454 aa10.23□□□□□ -0.77
CTDSPL2-210ENST00000560834 DIP2AQ14689 1571 aa10.22□□□□□ -0.77
CTDSPL2-210ENST00000560834 KIAA1210Q9ULL0 1709 aa10.22□□□□□ -0.77
CTDSPL2-210ENST00000560834 POTEIP0CG38 1075 aa10.22□□□□□ -0.77
CTDSPL2-210ENST00000560834 CHGAP10645 457 aaKnown RBP10.22□□□□□ -0.77
CTDSPL2-210ENST00000560834 PIK3C2GO75747 1445 aa10.22□□□□□ -0.77
CTDSPL2-210ENST00000560834 ASXL1Q8IXJ9 1541 aa10.22□□□□□ -0.77
CTDSPL2-210ENST00000560834 NEUROD1Q13562 356 aa10.21□□□□□ -0.77
CTDSPL2-210ENST00000560834 STAG3Q9UJ98 1225 aa10.21□□□□□ -0.77
CTDSPL2-210ENST00000560834 TONSLQ96HA7 1378 aa10.21□□□□□ -0.78
CTDSPL2-210ENST00000560834 HSPA2P54652 639 aa10.2□□□□□ -0.78
CTDSPL2-210ENST00000560834 RPGRIP1LQ68CZ1 1315 aa10.2□□□□□ -0.78
CTDSPL2-210ENST00000560834 PRAG1Q86YV5 1406 aa10.2□□□□□ -0.78
CTDSPL2-210ENST00000560834 THEMISQ8N1K5 641 aaPredicted RBP10.2□□□□□ -0.78
CTDSPL2-210ENST00000560834 PLEKHG1Q9ULL1 1385 aa10.2□□□□□ -0.78
CTDSPL2-210ENST00000560834 ALKQ9UM73 1620 aa10.19□□□□□ -0.78
CTDSPL2-210ENST00000560834 ADAMTS13Q76LX8 1427 aa10.19□□□□□ -0.78
CTDSPL2-210ENST00000560834 LTKP29376 864 aa10.19□□□□□ -0.78
CTDSPL2-210ENST00000560834 RGL3Q3MIN7 710 aa10.19□□□□□ -0.78
CTDSPL2-210ENST00000560834 ZNF326Q5BKZ1 582 aaKnown RBP10.19□□□□□ -0.78
CTDSPL2-210ENST00000560834 KNDC1Q76NI1 1749 aa10.19□□□□□ -0.78
CTDSPL2-210ENST00000560834 NPHP4O75161 1426 aaPredicted RBP10.18□□□□□ -0.78
CTDSPL2-210ENST00000560834 L3MBTL2Q969R5 705 aa10.18□□□□□ -0.78
CTDSPL2-210ENST00000560834 XRN1Q8IZH2 1706 aaKnown RBP10.18□□□□□ -0.78
CTDSPL2-210ENST00000560834 ADGRB1O14514 1584 aa10.18□□□□□ -0.78
CTDSPL2-210ENST00000560834 NWD1Q149M9 1564 aa10.18□□□□□ -0.78
CTDSPL2-210ENST00000560834 ADGRF5Q8IZF2 1346 aa10.17□□□□□ -0.78
CTDSPL2-210ENST00000560834 RALGAPBQ86X10 1494 aa10.17□□□□□ -0.78
CTDSPL2-210ENST00000560834 NUTM2DQ5VT03 806 aaPredicted RBP10.16□□□□□ -0.78
CTDSPL2-210ENST00000560834 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.16□□□□□ -0.78
CTDSPL2-210ENST00000560834 DCAF11Q8TEB1 546 aa10.16□□□□□ -0.78
CTDSPL2-210ENST00000560834 STRCP1A6NGW2 1772 aa10.16□□□□□ -0.78
CTDSPL2-210ENST00000560834 NCKAP5LQ9HCH0 1330 aa10.15□□□□□ -0.78
CTDSPL2-210ENST00000560834 CHD2O14647 1828 aaKnown RBP10.15□□□□□ -0.78
CTDSPL2-210ENST00000560834 MKRN4PQ13434 485 aaPredicted RBP10.15□□□□□ -0.78
CTDSPL2-210ENST00000560834 TXNDC2Q86VQ3 553 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms