RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 ADAMTS8Q9UP79 889 aa20.64■□□□□ 0.89
PBX1-219ENST00000560641 PDS5BQ9NTI5 1447 aa20.64■□□□□ 0.89
PBX1-219ENST00000560641 CGNL1Q0VF96 1302 aa20.64■□□□□ 0.89
PBX1-219ENST00000560641 PDE3AQ14432 1141 aa20.64■□□□□ 0.89
PBX1-219ENST00000560641 CENPJQ9HC77 1338 aaPredicted RBP20.63■□□□□ 0.89
PBX1-219ENST00000560641 PNNQ9H307 717 aaKnown RBP20.63■□□□□ 0.89
PBX1-219ENST00000560641 MYOM1P52179 1685 aa20.62■□□□□ 0.89
PBX1-219ENST00000560641 GOLGA6L3A6NEY3 463 aa20.62■□□□□ 0.89
PBX1-219ENST00000560641 SHROOM2Q13796 1616 aa20.62■□□□□ 0.89
PBX1-219ENST00000560641 MAST1Q9Y2H9 1570 aa20.62■□□□□ 0.89
PBX1-219ENST00000560641 IQGAP3Q86VI3 1631 aa20.62■□□□□ 0.89
PBX1-219ENST00000560641 MAGI2Q86UL8 1455 aa20.61■□□□□ 0.89
PBX1-219ENST00000560641 TBC1D32Q96NH3 1257 aa20.61■□□□□ 0.89
PBX1-219ENST00000560641 HSP90AA1P07900 732 aaKnown RBP20.6■□□□□ 0.89
PBX1-219ENST00000560641 HSP90AA2PQ14568 343 aaPredicted RBP20.6■□□□□ 0.89
PBX1-219ENST00000560641 ZMYND15Q9H091 742 aa20.6■□□□□ 0.89
PBX1-219ENST00000560641 ASXL1Q8IXJ9 1541 aa20.6■□□□□ 0.89
PBX1-219ENST00000560641 PANK3Q9H999 370 aa20.59■□□□□ 0.89
PBX1-219ENST00000560641 RGS3P49796 1198 aa20.58■□□□□ 0.89
PBX1-219ENST00000560641 MRE11P49959 708 aa20.58■□□□□ 0.89
PBX1-219ENST00000560641 PLA2R1Q13018 1463 aa20.58■□□□□ 0.89
PBX1-219ENST00000560641 PPP2R1AP30153 589 aa20.57■□□□□ 0.88
PBX1-219ENST00000560641 IGHDP01880 384 aa20.56■□□□□ 0.88
PBX1-219ENST00000560641 RTEL1-TNFRSF6BF6WH68 1400 aa20.56■□□□□ 0.88
PBX1-219ENST00000560641 MCM4P33991 863 aa20.56■□□□□ 0.88
PBX1-219ENST00000560641 CC2D1BQ5T0F9 858 aaKnown RBP20.56■□□□□ 0.88
PBX1-219ENST00000560641 TMF1P82094 1093 aa20.55■□□□□ 0.88
PBX1-219ENST00000560641 SEC24BO95487 1268 aa20.55■□□□□ 0.88
PBX1-219ENST00000560641 NCOA3Q9Y6Q9 1424 aa20.55■□□□□ 0.88
PBX1-219ENST00000560641 ABCA8O94911 1581 aa20.55■□□□□ 0.88
PBX1-219ENST00000560641 TBC1D2Q9BYX2 928 aa20.53■□□□□ 0.88
PBX1-219ENST00000560641 E9PSI1 815 aa20.53■□□□□ 0.88
PBX1-219ENST00000560641 MADDQ8WXG6 1647 aa20.53■□□□□ 0.88
PBX1-219ENST00000560641 WDR43Q15061 677 aaKnown RBP eCLIP20.52■□□□□ 0.88
PBX1-219ENST00000560641 AMER1Q5JTC6 1135 aaPredicted RBP20.52■□□□□ 0.88
PBX1-219ENST00000560641 TPM2P07951 284 aa20.52■□□□□ 0.88
PBX1-219ENST00000560641 CLUAP1Q96AJ1 413 aa20.52■□□□□ 0.88
PBX1-219ENST00000560641 NAP1L5Q96NT1 182 aaPredicted RBP20.52■□□□□ 0.88
PBX1-219ENST00000560641 KDM2AQ9Y2K7 1162 aa20.52■□□□□ 0.88
PBX1-219ENST00000560641 VSIG10Q8N0Z9 540 aa20.5■□□□□ 0.87
PBX1-219ENST00000560641 NBPF1Q3BBV0 1214 aa20.49■□□□□ 0.87
PBX1-219ENST00000560641 UPF2Q9HAU5 1272 aaKnown RBP20.49■□□□□ 0.87
PBX1-219ENST00000560641 KIAA1210Q9ULL0 1709 aa20.49■□□□□ 0.87
PBX1-219ENST00000560641 PMFBP1Q8TBY8 1022 aa20.48■□□□□ 0.87
PBX1-219ENST00000560641 PREX2Q70Z35 1606 aa20.48■□□□□ 0.87
PBX1-219ENST00000560641 CHMP5Q9NZZ3 219 aa20.48■□□□□ 0.87
PBX1-219ENST00000560641 DUOX2Q9NRD8 1548 aa20.48■□□□□ 0.87
PBX1-219ENST00000560641 SPHKAPQ2M3C7 1700 aa20.48■□□□□ 0.87
PBX1-219ENST00000560641 SLKQ9H2G2 1235 aaPredicted RBP20.47■□□□□ 0.87
PBX1-219ENST00000560641 GRIN2AQ12879 1464 aa20.46■□□□□ 0.87
PBX1-219ENST00000560641 ESPNB1AK53 854 aa20.46■□□□□ 0.87
PBX1-219ENST00000560641 DDIT3P35638 169 aa20.46■□□□□ 0.87
PBX1-219ENST00000560641 MAGI1Q96QZ7 1491 aaPredicted RBP20.46■□□□□ 0.87
PBX1-219ENST00000560641 DDX11L8A8MPP1 907 aa20.46■□□□□ 0.87
PBX1-219ENST00000560641 PANK2Q9BZ23 570 aa20.46■□□□□ 0.87
PBX1-219ENST00000560641 KDM5AP29375 1690 aaKnown RBP20.45■□□□□ 0.87
PBX1-219ENST00000560641 SAMD9LQ8IVG5 1584 aa20.45■□□□□ 0.86
PBX1-219ENST00000560641 CEP152O94986 1710 aa20.45■□□□□ 0.86
PBX1-219ENST00000560641 TERF1P54274 439 aa20.45■□□□□ 0.86
PBX1-219ENST00000560641 TRAK2O60296 914 aa20.44■□□□□ 0.86
PBX1-219ENST00000560641 PDCL3Q9H2J4 239 aa20.44■□□□□ 0.86
PBX1-219ENST00000560641 GRPEL1Q9HAV7 217 aa20.44■□□□□ 0.86
PBX1-219ENST00000560641 PLB1Q6P1J6 1458 aa20.44■□□□□ 0.86
PBX1-219ENST00000560641 CDC42BPBQ9Y5S2 1711 aa20.43■□□□□ 0.86
PBX1-219ENST00000560641 ZNF692Q9BU19 519 aaPredicted RBP20.43■□□□□ 0.86
PBX1-219ENST00000560641 SHPRHQ149N8 1683 aa20.43■□□□□ 0.86
PBX1-219ENST00000560641 BCAR3O75815 825 aa20.43■□□□□ 0.86
PBX1-219ENST00000560641 TTC37Q6PGP7 1564 aa20.43■□□□□ 0.86
PBX1-219ENST00000560641 SPINK5Q9NQ38 1064 aaPredicted RBP20.42■□□□□ 0.86
PBX1-219ENST00000560641 NEURL4Q96JN8 1562 aa20.42■□□□□ 0.86
PBX1-219ENST00000560641 KANK1Q14678 1352 aa20.42■□□□□ 0.86
PBX1-219ENST00000560641 ARHGAP31Q2M1Z3 1444 aa20.41■□□□□ 0.86
PBX1-219ENST00000560641 MYH16Q9H6N6 1097 aa20.41■□□□□ 0.86
PBX1-219ENST00000560641 KNSTRNQ9Y448 316 aa20.41■□□□□ 0.86
PBX1-219ENST00000560641 IQSEC2Q5JU85 1478 aa20.41■□□□□ 0.86
PBX1-219ENST00000560641 PTMSP20962 102 aa20.4■□□□□ 0.86
PBX1-219ENST00000560641 CDCA8Q53HL2 280 aa20.4■□□□□ 0.86
PBX1-219ENST00000560641 NCBP3Q53F19 620 aaKnown RBP20.4■□□□□ 0.86
PBX1-219ENST00000560641 RSPH4AQ5TD94 716 aa20.4■□□□□ 0.86
PBX1-219ENST00000560641 ARID3CA6NKF2 412 aa20.39■□□□□ 0.85
PBX1-219ENST00000560641 IFT140Q96RY7 1462 aa20.39■□□□□ 0.85
PBX1-219ENST00000560641 ERBB4Q15303 1308 aa20.39■□□□□ 0.85
PBX1-219ENST00000560641 TSPY4P0CV99 314 aa20.38■□□□□ 0.85
PBX1-219ENST00000560641 TSPY10P0CW01 314 aa20.38■□□□□ 0.85
PBX1-219ENST00000560641 SCAF11Q99590 1463 aaKnown RBP20.38■□□□□ 0.85
PBX1-219ENST00000560641 IBTKQ9P2D0 1353 aaPredicted RBP20.38■□□□□ 0.85
PBX1-219ENST00000560641 CALD1Q05682 793 aaKnown RBP20.36■□□□□ 0.85
PBX1-219ENST00000560641 STAC3Q96MF2 364 aa20.36■□□□□ 0.85
PBX1-219ENST00000560641 CIZ1Q9ULV3 898 aaPredicted RBP20.36■□□□□ 0.85
PBX1-219ENST00000560641 POLR3AO14802 1390 aaPredicted RBP20.35■□□□□ 0.85
PBX1-219ENST00000560641 SNX21Q969T3 373 aa20.34■□□□□ 0.85
PBX1-219ENST00000560641 PPP1R9BQ96SB3 815 aa20.34■□□□□ 0.85
PBX1-219ENST00000560641 PHF23Q9BUL5 403 aaPredicted RBP20.34■□□□□ 0.85
PBX1-219ENST00000560641 MRC2Q9UBG0 1479 aa20.33■□□□□ 0.85
PBX1-219ENST00000560641 MYO3AQ8NEV4 1616 aa20.33■□□□□ 0.85
PBX1-219ENST00000560641 SKOR2Q2VWA4 1001 aaPredicted RBP20.33■□□□□ 0.85
PBX1-219ENST00000560641 ZNF777Q9ULD5 760 aaPredicted RBP20.33■□□□□ 0.84
PBX1-219ENST00000560641 ATP10BO94823 1461 aa20.32■□□□□ 0.84
PBX1-219ENST00000560641 PDZRN3Q9UPQ7 1066 aa20.32■□□□□ 0.84
PBX1-219ENST00000560641 USP32Q8NFA0 1604 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms