RNA–Protein interactions for RNA: ENST00000560588.5

RMDN3-209, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 2,202 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-209ENST00000560588 CD109Q6YHK3 1445 aa13.87□□□□□ -0.19
RMDN3-209ENST00000560588 PANK3Q9H999 370 aa13.87□□□□□ -0.19
RMDN3-209ENST00000560588 HECW2Q9P2P5 1572 aa13.87□□□□□ -0.19
RMDN3-209ENST00000560588 PPRC1Q5VV67 1664 aaKnown RBP13.86□□□□□ -0.19
RMDN3-209ENST00000560588 NEO1Q92859 1461 aa13.86□□□□□ -0.19
RMDN3-209ENST00000560588 IRX6P78412 446 aaPredicted RBP13.86□□□□□ -0.19
RMDN3-209ENST00000560588 CNGB1Q14028 1251 aaPredicted RBP13.86□□□□□ -0.19
RMDN3-209ENST00000560588 NPC1L1Q9UHC9 1359 aa13.85□□□□□ -0.19
RMDN3-209ENST00000560588 NRXN1Q9ULB1 1477 aa13.84□□□□□ -0.19
RMDN3-209ENST00000560588 KDM5AP29375 1690 aaKnown RBP13.84□□□□□ -0.19
RMDN3-209ENST00000560588 BLMP54132 1417 aaPredicted RBP13.84□□□□□ -0.19
RMDN3-209ENST00000560588 ABCA6Q8N139 1617 aa13.83□□□□□ -0.2
RMDN3-209ENST00000560588 RBM19Q9Y4C8 960 aaKnown RBP13.83□□□□□ -0.2
RMDN3-209ENST00000560588 ADGRB3O60242 1522 aa13.83□□□□□ -0.2
RMDN3-209ENST00000560588 SETBP1Q9Y6X0 1596 aa13.82□□□□□ -0.2
RMDN3-209ENST00000560588 KNSTRNQ9Y448 316 aa13.82□□□□□ -0.2
RMDN3-209ENST00000560588 MYO3AQ8NEV4 1616 aa13.82□□□□□ -0.2
RMDN3-209ENST00000560588 ASXL1Q8IXJ9 1541 aa13.81□□□□□ -0.2
RMDN3-209ENST00000560588 RPGRIP1LQ68CZ1 1315 aa13.8□□□□□ -0.2
RMDN3-209ENST00000560588 FRMPD1Q5SYB0 1578 aa13.8□□□□□ -0.2
RMDN3-209ENST00000560588 SBNO2Q9Y2G9 1366 aa13.8□□□□□ -0.2
RMDN3-209ENST00000560588 CC2D1BQ5T0F9 858 aaKnown RBP13.79□□□□□ -0.2
RMDN3-209ENST00000560588 MROH2AA6NES4 1674 aa13.79□□□□□ -0.2
RMDN3-209ENST00000560588 MYOM1P52179 1685 aa13.79□□□□□ -0.2
RMDN3-209ENST00000560588 PIK3C2GO75747 1445 aa13.78□□□□□ -0.2
RMDN3-209ENST00000560588 ABCC3O15438 1527 aa13.77□□□□□ -0.2
RMDN3-209ENST00000560588 UGGT1Q9NYU2 1555 aa13.77□□□□□ -0.2
RMDN3-209ENST00000560588 PPLO60437 1756 aa13.77□□□□□ -0.2
RMDN3-209ENST00000560588 ZC3H13Q5T200 1668 aaKnown RBP13.77□□□□□ -0.21
RMDN3-209ENST00000560588 AMER1Q5JTC6 1135 aaPredicted RBP13.76□□□□□ -0.21
RMDN3-209ENST00000560588 CAMSAP1Q5T5Y3 1602 aa13.76□□□□□ -0.21
RMDN3-209ENST00000560588 NPATQ14207 1427 aa13.76□□□□□ -0.21
RMDN3-209ENST00000560588 FANCIQ9NVI1 1328 aa13.75□□□□□ -0.21
RMDN3-209ENST00000560588 ERVK-7P63135 1459 aa13.75□□□□□ -0.21
RMDN3-209ENST00000560588 PPP2R1AP30153 589 aa13.74□□□□□ -0.21
RMDN3-209ENST00000560588 B4GALNT3Q6L9W6 998 aa13.74□□□□□ -0.21
RMDN3-209ENST00000560588 ADGRF5Q8IZF2 1346 aa13.74□□□□□ -0.21
RMDN3-209ENST00000560588 GLI2P10070 1586 aa13.74□□□□□ -0.21
RMDN3-209ENST00000560588 ARHGAP31Q2M1Z3 1444 aa13.74□□□□□ -0.21
RMDN3-209ENST00000560588 CFAP70Q5T0N1 1121 aa13.74□□□□□ -0.21
RMDN3-209ENST00000560588 RCAN3Q9UKA8 241 aa13.74□□□□□ -0.21
RMDN3-209ENST00000560588 DIP2CQ9Y2E4 1556 aa13.73□□□□□ -0.21
RMDN3-209ENST00000560588 NOS1P29475 1434 aa13.73□□□□□ -0.21
RMDN3-209ENST00000560588 RRP1P56182 461 aaKnown RBP13.73□□□□□ -0.21
RMDN3-209ENST00000560588 WDR43Q15061 677 aaKnown RBP eCLIP13.72□□□□□ -0.21
RMDN3-209ENST00000560588 PIK3C2BO00750 1634 aa13.72□□□□□ -0.21
RMDN3-209ENST00000560588 CCDC136Q96JN2 1154 aa13.72□□□□□ -0.21
RMDN3-209ENST00000560588 RICTORQ6R327 1708 aa13.71□□□□□ -0.21
RMDN3-209ENST00000560588 C14orf93Q9H972 538 aaKnown RBP13.71□□□□□ -0.21
RMDN3-209ENST00000560588 CENPJQ9HC77 1338 aaPredicted RBP13.7□□□□□ -0.22
RMDN3-209ENST00000560588 PUS7Q96PZ0 661 aaKnown RBP13.7□□□□□ -0.22
RMDN3-209ENST00000560588 NGEFQ8N5V2 710 aa13.7□□□□□ -0.22
RMDN3-209ENST00000560588 GGT6Q6P531 493 aa13.69□□□□□ -0.22
RMDN3-209ENST00000560588 ANP32EQ9BTT0 268 aa13.69□□□□□ -0.22
RMDN3-209ENST00000560588 ADGRB1O14514 1584 aa13.68□□□□□ -0.22
RMDN3-209ENST00000560588 QRICH2Q9H0J4 1663 aa13.68□□□□□ -0.22
RMDN3-209ENST00000560588 ZFYVE9O95405 1425 aa13.67□□□□□ -0.22
RMDN3-209ENST00000560588 USP32Q8NFA0 1604 aa13.67□□□□□ -0.22
RMDN3-209ENST00000560588 CHGAP10645 457 aaKnown RBP13.67□□□□□ -0.22
RMDN3-209ENST00000560588 ADAMTS8Q9UP79 889 aa13.67□□□□□ -0.22
RMDN3-209ENST00000560588 VGFO15240 615 aaPredicted RBP13.66□□□□□ -0.22
RMDN3-209ENST00000560588 CFAP65Q6ZU64 1925 aaKnown RBP13.66□□□□□ -0.22
RMDN3-209ENST00000560588 SIGLEC1Q9BZZ2 1709 aa13.65□□□□□ -0.22
RMDN3-209ENST00000560588 SLC52A1Q9NWF4 448 aa13.65□□□□□ -0.22
RMDN3-209ENST00000560588 NEXMIFQ5QGS0 1516 aa13.65□□□□□ -0.22
RMDN3-209ENST00000560588 RAPGEF3O95398 923 aa13.63□□□□□ -0.23
RMDN3-209ENST00000560588 SALL2Q9Y467 1007 aaPredicted RBP13.63□□□□□ -0.23
RMDN3-209ENST00000560588 POLR3AO14802 1390 aaPredicted RBP13.62□□□□□ -0.23
RMDN3-209ENST00000560588 ZNF521Q96K83 1311 aa13.62□□□□□ -0.23
RMDN3-209ENST00000560588 CDCA7LQ96GN5 454 aa13.62□□□□□ -0.23
RMDN3-209ENST00000560588 REREQ9P2R6 1566 aa13.62□□□□□ -0.23
RMDN3-209ENST00000560588 GOLGA2Q08379 1002 aa13.61□□□□□ -0.23
RMDN3-209ENST00000560588 PPP6R1Q9UPN7 881 aa13.61□□□□□ -0.23
RMDN3-209ENST00000560588 ARHGEF28Q8N1W1 1705 aaKnown RBP13.61□□□□□ -0.23
RMDN3-209ENST00000560588 PREX1Q8TCU6 1659 aa13.6□□□□□ -0.23
RMDN3-209ENST00000560588 CARD14Q9BXL6 1004 aa13.6□□□□□ -0.23
RMDN3-209ENST00000560588 NSD2O96028 1365 aa13.6□□□□□ -0.23
RMDN3-209ENST00000560588 NINLQ9Y2I6 1382 aa13.6□□□□□ -0.23
RMDN3-209ENST00000560588 SENP3-EIF4A1A0A087X0R7 540 aa13.6□□□□□ -0.23
RMDN3-209ENST00000560588 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.6□□□□□ -0.23
RMDN3-209ENST00000560588 EVC2Q86UK5 1308 aa13.6□□□□□ -0.23
RMDN3-209ENST00000560588 EXOC6Q8TAG9 804 aa13.59□□□□□ -0.23
RMDN3-209ENST00000560588 TRAK1Q9UPV9 953 aa13.59□□□□□ -0.23
RMDN3-209ENST00000560588 NSD3Q9BZ95 1437 aa13.59□□□□□ -0.23
RMDN3-209ENST00000560588 PLEKHH1Q9ULM0 1364 aa13.58□□□□□ -0.24
RMDN3-209ENST00000560588 TCERG1O14776 1098 aaKnown RBP13.58□□□□□ -0.24
RMDN3-209ENST00000560588 AGLP35573 1532 aa13.58□□□□□ -0.24
RMDN3-209ENST00000560588 TMEM131LA2VDJ0 1609 aa13.57□□□□□ -0.24
RMDN3-209ENST00000560588 YEATS2Q9ULM3 1422 aa13.57□□□□□ -0.24
RMDN3-209ENST00000560588 CGNL1Q0VF96 1302 aa13.56□□□□□ -0.24
RMDN3-209ENST00000560588 SLFN5Q08AF3 891 aa13.56□□□□□ -0.24
RMDN3-209ENST00000560588 DUSP27Q5VZP5 1158 aa13.56□□□□□ -0.24
RMDN3-209ENST00000560588 MORC1Q86VD1 984 aa13.56□□□□□ -0.24
RMDN3-209ENST00000560588 TRMT2AQ8IZ69 625 aaKnown RBP13.56□□□□□ -0.24
RMDN3-209ENST00000560588 DIP2BQ9P265 1576 aa13.56□□□□□ -0.24
RMDN3-209ENST00000560588 E9PSI1 815 aa13.55□□□□□ -0.24
RMDN3-209ENST00000560588 MS4A1P11836 297 aa13.55□□□□□ -0.24
RMDN3-209ENST00000560588 NCBP3Q53F19 620 aaKnown RBP13.55□□□□□ -0.24
RMDN3-209ENST00000560588 ANKRD36BQ8N2N9 1353 aa13.55□□□□□ -0.24
RMDN3-209ENST00000560588 IDI1Q13907 227 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms