RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 TRIM52Q96A61 297 aa14.25□□□□□ -0.13
RABGGTA-217ENST00000560521 GCC2Q8IWJ2 1684 aa14.25□□□□□ -0.13
RABGGTA-217ENST00000560521 ABCC5O15440 1437 aa14.24□□□□□ -0.13
RABGGTA-217ENST00000560521 NOS1P29475 1434 aa14.24□□□□□ -0.13
RABGGTA-217ENST00000560521 KANK1Q14678 1352 aa14.23□□□□□ -0.13
RABGGTA-217ENST00000560521 ZNF772Q68DY9 489 aaPredicted RBP14.23□□□□□ -0.13
RABGGTA-217ENST00000560521 FGD6Q6ZV73 1430 aa14.23□□□□□ -0.13
RABGGTA-217ENST00000560521 PTPN23Q9H3S7 1636 aa14.23□□□□□ -0.13
RABGGTA-217ENST00000560521 SPATA31A6Q5VVP1 1343 aa14.22□□□□□ -0.13
RABGGTA-217ENST00000560521 BCANQ96GW7 911 aa14.22□□□□□ -0.13
RABGGTA-217ENST00000560521 AHDC1Q5TGY3 1603 aaPredicted RBP14.22□□□□□ -0.13
RABGGTA-217ENST00000560521 MEX3CQ5U5Q3 659 aaKnown RBP14.2□□□□□ -0.14
RABGGTA-217ENST00000560521 ZFYVE9O95405 1425 aa14.2□□□□□ -0.14
RABGGTA-217ENST00000560521 TMEM131LA2VDJ0 1609 aa14.19□□□□□ -0.14
RABGGTA-217ENST00000560521 DIP2AQ14689 1571 aa14.19□□□□□ -0.14
RABGGTA-217ENST00000560521 VPS8Q8N3P4 1428 aa14.19□□□□□ -0.14
RABGGTA-217ENST00000560521 SLC52A1Q9NWF4 448 aa14.19□□□□□ -0.14
RABGGTA-217ENST00000560521 DAPK1P53355 1430 aa14.18□□□□□ -0.14
RABGGTA-217ENST00000560521 NCOA3Q9Y6Q9 1424 aa14.18□□□□□ -0.14
RABGGTA-217ENST00000560521 RXRBP28702 533 aa14.18□□□□□ -0.14
RABGGTA-217ENST00000560521 PLEKHG1Q9ULL1 1385 aa14.18□□□□□ -0.14
RABGGTA-217ENST00000560521 CDK12Q9NYV4 1490 aaPredicted RBP14.17□□□□□ -0.14
RABGGTA-217ENST00000560521 TBX22Q9Y458 520 aa14.16□□□□□ -0.14
RABGGTA-217ENST00000560521 RIMS2Q9UQ26 1411 aa14.15□□□□□ -0.14
RABGGTA-217ENST00000560521 CHIC2Q9UKJ5 165 aa14.15□□□□□ -0.14
RABGGTA-217ENST00000560521 C14orf37Q86TY3 774 aa14.14□□□□□ -0.15
RABGGTA-217ENST00000560521 CADPS2Q86UW7 1296 aa14.14□□□□□ -0.15
RABGGTA-217ENST00000560521 C19orf44Q9H6X5 657 aa14.14□□□□□ -0.15
RABGGTA-217ENST00000560521 NHSL1Q5SYE7 1610 aa14.14□□□□□ -0.15
RABGGTA-217ENST00000560521 NUTM2BA6NNL0 878 aaPredicted RBP14.13□□□□□ -0.15
RABGGTA-217ENST00000560521 NUTM2EB1AL46 878 aaPredicted RBP14.13□□□□□ -0.15
RABGGTA-217ENST00000560521 NUTM2AQ8IVF1 878 aaPredicted RBP14.13□□□□□ -0.15
RABGGTA-217ENST00000560521 ADAMTS13Q76LX8 1427 aa14.13□□□□□ -0.15
RABGGTA-217ENST00000560521 RPRD2Q5VT52 1461 aaKnown RBP14.12□□□□□ -0.15
RABGGTA-217ENST00000560521 ANKRD30AQ9BXX3 1397 aa14.12□□□□□ -0.15
RABGGTA-217ENST00000560521 PPP1R15AO75807 674 aaPredicted RBP14.12□□□□□ -0.15
RABGGTA-217ENST00000560521 ATF3P18847 181 aa14.12□□□□□ -0.15
RABGGTA-217ENST00000560521 HDGFP51858 240 aaKnown RBP14.12□□□□□ -0.15
RABGGTA-217ENST00000560521 AFF2P51816 1311 aa14.12□□□□□ -0.15
RABGGTA-217ENST00000560521 BRINP3Q76B58 766 aa14.11□□□□□ -0.15
RABGGTA-217ENST00000560521 E9PCH4 1651 aa14.1□□□□□ -0.15
RABGGTA-217ENST00000560521 NUTM2DQ5VT03 806 aaPredicted RBP14.1□□□□□ -0.15
RABGGTA-217ENST00000560521 RGS12O14924 1447 aa14.08□□□□□ -0.15
RABGGTA-217ENST00000560521 PIK3R4Q99570 1358 aa14.08□□□□□ -0.16
RABGGTA-217ENST00000560521 PTPRUQ92729 1446 aa14.07□□□□□ -0.16
RABGGTA-217ENST00000560521 SETD5Q9C0A6 1442 aa14.07□□□□□ -0.16
RABGGTA-217ENST00000560521 TRPM2O94759 1503 aa14.07□□□□□ -0.16
RABGGTA-217ENST00000560521 ASXL1Q8IXJ9 1541 aa14.07□□□□□ -0.16
RABGGTA-217ENST00000560521 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.07□□□□□ -0.16
RABGGTA-217ENST00000560521 QTRT2Q9H974 415 aaKnown RBP14.07□□□□□ -0.16
RABGGTA-217ENST00000560521 AMOTL2Q9Y2J4 779 aa14.07□□□□□ -0.16
RABGGTA-217ENST00000560521 UNC13BO14795 1591 aa14.07□□□□□ -0.16
RABGGTA-217ENST00000560521 XRN1Q8IZH2 1706 aaKnown RBP14.07□□□□□ -0.16
RABGGTA-217ENST00000560521 ADGRL2O95490 1459 aa14.06□□□□□ -0.16
RABGGTA-217ENST00000560521 NRXN3Q9Y4C0 1643 aa14.06□□□□□ -0.16
RABGGTA-217ENST00000560521 LOC105371045A0A1W2PR82 267 aa14.06□□□□□ -0.16
RABGGTA-217ENST00000560521 CHGAP10645 457 aaKnown RBP14.06□□□□□ -0.16
RABGGTA-217ENST00000560521 RBM6P78332 1123 aaKnown RBP14.06□□□□□ -0.16
RABGGTA-217ENST00000560521 SRCAPQ6ZRS2 3230 aa14.06□□□□□ -0.16
RABGGTA-217ENST00000560521 LRRC59Q96AG4 307 aaKnown RBP14.04□□□□□ -0.16
RABGGTA-217ENST00000560521 C8orf37Q96NL8 207 aa14.04□□□□□ -0.16
RABGGTA-217ENST00000560521 MST1RQ04912 1400 aa14.04□□□□□ -0.16
RABGGTA-217ENST00000560521 ANKRD50Q9ULJ7 1429 aa14.04□□□□□ -0.16
RABGGTA-217ENST00000560521 DCCP43146 1447 aa14.03□□□□□ -0.16
RABGGTA-217ENST00000560521 NALCNQ8IZF0 1738 aa14.02□□□□□ -0.16
RABGGTA-217ENST00000560521 DDX17Q92841 729 aaKnown RBP14.02□□□□□ -0.17
RABGGTA-217ENST00000560521 PNPLA6Q8IY17 1366 aa14.01□□□□□ -0.17
RABGGTA-217ENST00000560521 LAMC1P11047 1609 aa14□□□□□ -0.17
RABGGTA-217ENST00000560521 IQGAP3Q86VI3 1631 aa14□□□□□ -0.17
RABGGTA-217ENST00000560521 MARF1Q9Y4F3 1742 aaKnown RBP13.99□□□□□ -0.17
RABGGTA-217ENST00000560521 SETBP1Q9Y6X0 1596 aa13.98□□□□□ -0.17
RABGGTA-217ENST00000560521 NGLY1Q96IV0 654 aa13.98□□□□□ -0.17
RABGGTA-217ENST00000560521 ADAMTS2O95450 1211 aa13.97□□□□□ -0.17
RABGGTA-217ENST00000560521 APLP2Q06481 763 aa13.97□□□□□ -0.17
RABGGTA-217ENST00000560521 ATAD2Q6PL18 1390 aa13.96□□□□□ -0.17
RABGGTA-217ENST00000560521 EP400Q96L91 3159 aa13.96□□□□□ -0.17
RABGGTA-217ENST00000560521 SPHKAPQ2M3C7 1700 aa13.96□□□□□ -0.17
RABGGTA-217ENST00000560521 ZRANB1Q9UGI0 708 aa13.95□□□□□ -0.18
RABGGTA-217ENST00000560521 ADGRL3Q9HAR2 1447 aa13.95□□□□□ -0.18
RABGGTA-217ENST00000560521 METP08581 1390 aa13.95□□□□□ -0.18
RABGGTA-217ENST00000560521 FAM50AQ14320 339 aaKnown RBP13.94□□□□□ -0.18
RABGGTA-217ENST00000560521 USP21Q9UK80 565 aa13.94□□□□□ -0.18
RABGGTA-217ENST00000560521 BRWD3Q6RI45 1802 aa13.94□□□□□ -0.18
RABGGTA-217ENST00000560521 COL22A1Q8NFW1 1626 aaPredicted RBP13.93□□□□□ -0.18
RABGGTA-217ENST00000560521 KIF1BO60333 1816 aa13.92□□□□□ -0.18
RABGGTA-217ENST00000560521 FNBP4Q8N3X1 1017 aaPredicted RBP13.92□□□□□ -0.18
RABGGTA-217ENST00000560521 TRPC5Q9UL62 973 aaPredicted RBP13.92□□□□□ -0.18
RABGGTA-217ENST00000560521 C1orf167Q5SNV9 1468 aa13.92□□□□□ -0.18
RABGGTA-217ENST00000560521 SOS2Q07890 1332 aaPredicted RBP13.91□□□□□ -0.18
RABGGTA-217ENST00000560521 ATRNO75882 1429 aa13.91□□□□□ -0.18
RABGGTA-217ENST00000560521 FOXD1Q16676 465 aa13.9□□□□□ -0.18
RABGGTA-217ENST00000560521 PTCH1Q13635 1447 aa13.9□□□□□ -0.19
RABGGTA-217ENST00000560521 ORAI2Q96SN7 254 aa13.89□□□□□ -0.19
RABGGTA-217ENST00000560521 CCDC125Q86Z20 511 aa13.88□□□□□ -0.19
RABGGTA-217ENST00000560521 NEXMIFQ5QGS0 1516 aa13.88□□□□□ -0.19
RABGGTA-217ENST00000560521 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.87□□□□□ -0.19
RABGGTA-217ENST00000560521 NUP155O75694 1391 aa13.87□□□□□ -0.19
RABGGTA-217ENST00000560521 ZNF326Q5BKZ1 582 aaKnown RBP13.87□□□□□ -0.19
RABGGTA-217ENST00000560521 BCL9LQ86UU0 1499 aa13.87□□□□□ -0.19
RABGGTA-217ENST00000560521 CLTCL1P53675 1640 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms