RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 IDI1Q13907 227 aa12.21□□□□□ -0.45
TRAF3-209ENST00000560463 FBXO31Q5XUX0 539 aaPredicted RBP12.21□□□□□ -0.45
TRAF3-209ENST00000560463 MYO3AQ8NEV4 1616 aa12.21□□□□□ -0.46
TRAF3-209ENST00000560463 NLRP1Q9C000 1473 aa12.21□□□□□ -0.46
TRAF3-209ENST00000560463 ZNF142P52746 1687 aaPredicted RBP12.2□□□□□ -0.46
TRAF3-209ENST00000560463 ZFYVE9O95405 1425 aa12.2□□□□□ -0.46
TRAF3-209ENST00000560463 TNRQ92752 1358 aa12.19□□□□□ -0.46
TRAF3-209ENST00000560463 SETBP1Q9Y6X0 1596 aa12.19□□□□□ -0.46
TRAF3-209ENST00000560463 CHGAP10645 457 aaKnown RBP12.19□□□□□ -0.46
TRAF3-209ENST00000560463 ZNF326Q5BKZ1 582 aaKnown RBP12.19□□□□□ -0.46
TRAF3-209ENST00000560463 EIF4G2P78344 907 aaKnown RBP eCLIP12.18□□□□□ -0.46
TRAF3-209ENST00000560463 A2ML1A8K2U0 1454 aa12.18□□□□□ -0.46
TRAF3-209ENST00000560463 GPRASP1Q5JY77 1395 aa12.18□□□□□ -0.46
TRAF3-209ENST00000560463 ROCK2O75116 1388 aaKnown RBP12.17□□□□□ -0.46
TRAF3-209ENST00000560463 VGFO15240 615 aaPredicted RBP12.16□□□□□ -0.46
TRAF3-209ENST00000560463 SETD1AO15047 1707 aaKnown RBP12.16□□□□□ -0.46
TRAF3-209ENST00000560463 PIK3C2GO75747 1445 aa12.15□□□□□ -0.46
TRAF3-209ENST00000560463 STAG3Q9UJ98 1225 aa12.15□□□□□ -0.46
TRAF3-209ENST00000560463 CEP170BQ9Y4F5 1589 aaPredicted RBP12.13□□□□□ -0.47
TRAF3-209ENST00000560463 CARD11Q9BXL7 1154 aa12.13□□□□□ -0.47
TRAF3-209ENST00000560463 ARHGEF28Q8N1W1 1705 aaKnown RBP12.13□□□□□ -0.47
TRAF3-209ENST00000560463 USP47Q96K76 1375 aa12.13□□□□□ -0.47
TRAF3-209ENST00000560463 HSPA5P11021 654 aaKnown RBP12.12□□□□□ -0.47
TRAF3-209ENST00000560463 CEBPAP49715 358 aaPredicted RBP12.12□□□□□ -0.47
TRAF3-209ENST00000560463 HDGFP51858 240 aaKnown RBP12.12□□□□□ -0.47
TRAF3-209ENST00000560463 ADGRF5Q8IZF2 1346 aa12.11□□□□□ -0.47
TRAF3-209ENST00000560463 RIMS2Q9UQ26 1411 aa12.11□□□□□ -0.47
TRAF3-209ENST00000560463 SLIT1O75093 1534 aa12.11□□□□□ -0.47
TRAF3-209ENST00000560463 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRAF3-209ENST00000560463 NRXN3Q9Y4C0 1643 aa12.11□□□□□ -0.47
TRAF3-209ENST00000560463 QRICH2Q9H0J4 1663 aa12.1□□□□□ -0.47
TRAF3-209ENST00000560463 PTPRMP28827 1452 aa12.1□□□□□ -0.47
TRAF3-209ENST00000560463 SCAF11Q99590 1463 aaKnown RBP12.1□□□□□ -0.47
TRAF3-209ENST00000560463 NBPF1Q3BBV0 1214 aa12.1□□□□□ -0.47
TRAF3-209ENST00000560463 ALKQ9UM73 1620 aa12.1□□□□□ -0.47
TRAF3-209ENST00000560463 ADGRB1O14514 1584 aa12.09□□□□□ -0.47
TRAF3-209ENST00000560463 ARHGAP23Q9P227 1491 aa12.09□□□□□ -0.47
TRAF3-209ENST00000560463 KNDC1Q76NI1 1749 aa12.09□□□□□ -0.47
TRAF3-209ENST00000560463 C14orf93Q9H972 538 aaKnown RBP12.08□□□□□ -0.48
TRAF3-209ENST00000560463 EIF3AQ14152 1382 aaKnown RBP12.07□□□□□ -0.48
TRAF3-209ENST00000560463 TMEM2Q9UHN6 1383 aa12.07□□□□□ -0.48
TRAF3-209ENST00000560463 THEMISQ8N1K5 641 aaPredicted RBP12.07□□□□□ -0.48
TRAF3-209ENST00000560463 SLC24A1O60721 1099 aa12.06□□□□□ -0.48
TRAF3-209ENST00000560463 CFAP70Q5T0N1 1121 aa12.06□□□□□ -0.48
TRAF3-209ENST00000560463 DIEXFQ68CQ4 756 aaKnown RBP12.06□□□□□ -0.48
TRAF3-209ENST00000560463 HIRIP3Q9BW71 556 aaPredicted RBP12.06□□□□□ -0.48
TRAF3-209ENST00000560463 DIP2AQ14689 1571 aa12.05□□□□□ -0.48
TRAF3-209ENST00000560463 SENP3Q9H4L4 574 aaPredicted RBP12.05□□□□□ -0.48
TRAF3-209ENST00000560463 ST20-MTHFSA0A0A6YYL1 179 aa12.04□□□□□ -0.48
TRAF3-209ENST00000560463 ASXL1Q8IXJ9 1541 aa12.04□□□□□ -0.48
TRAF3-209ENST00000560463 CHD2O14647 1828 aaKnown RBP12.03□□□□□ -0.48
TRAF3-209ENST00000560463 PLPPR3Q6T4P5 718 aa12.03□□□□□ -0.48
TRAF3-209ENST00000560463 EID1Q9Y6B2 187 aa12.03□□□□□ -0.48
TRAF3-209ENST00000560463 PLEKHG1Q9ULL1 1385 aa12.03□□□□□ -0.48
TRAF3-209ENST00000560463 NUTM2DQ5VT03 806 aaPredicted RBP12.02□□□□□ -0.49
TRAF3-209ENST00000560463 CCDC7Q96M83 1385 aa12.02□□□□□ -0.49
TRAF3-209ENST00000560463 DLC1Q96QB1 1528 aa12.01□□□□□ -0.49
TRAF3-209ENST00000560463 WASHC2AQ641Q2 1341 aa12.01□□□□□ -0.49
TRAF3-209ENST00000560463 SBNO2Q9Y2G9 1366 aa12.01□□□□□ -0.49
TRAF3-209ENST00000560463 YTHDC2Q9H6S0 1430 aaKnown RBP12□□□□□ -0.49
TRAF3-209ENST00000560463 TESK2Q96S53 571 aa11.99□□□□□ -0.49
TRAF3-209ENST00000560463 MED14O60244 1454 aa11.99□□□□□ -0.49
TRAF3-209ENST00000560463 MYOM1P52179 1685 aa11.99□□□□□ -0.49
TRAF3-209ENST00000560463 CPS1P31327 1500 aa11.98□□□□□ -0.49
TRAF3-209ENST00000560463 KIF7Q2M1P5 1343 aa11.98□□□□□ -0.49
TRAF3-209ENST00000560463 C11orf95C9JLR9 678 aaPredicted RBP11.98□□□□□ -0.49
TRAF3-209ENST00000560463 TMF1P82094 1093 aa11.98□□□□□ -0.49
TRAF3-209ENST00000560463 TXNDC2Q86VQ3 553 aa11.98□□□□□ -0.49
TRAF3-209ENST00000560463 ADAMTS13Q76LX8 1427 aa11.97□□□□□ -0.49
TRAF3-209ENST00000560463 CENPJQ9HC77 1338 aaPredicted RBP11.97□□□□□ -0.49
TRAF3-209ENST00000560463 LTKP29376 864 aa11.97□□□□□ -0.49
TRAF3-209ENST00000560463 DDX10Q13206 875 aaKnown RBP11.97□□□□□ -0.49
TRAF3-209ENST00000560463 CDCA8Q53HL2 280 aa11.97□□□□□ -0.49
TRAF3-209ENST00000560463 TMEM132EQ6IEE7 984 aa11.97□□□□□ -0.49
TRAF3-209ENST00000560463 TECPR2O15040 1411 aa11.96□□□□□ -0.49
TRAF3-209ENST00000560463 LRPPRCP42704 1394 aaKnown RBP11.96□□□□□ -0.49
TRAF3-209ENST00000560463 TRAK1Q9UPV9 953 aa11.96□□□□□ -0.49
TRAF3-209ENST00000560463 XRN1Q8IZH2 1706 aaKnown RBP11.96□□□□□ -0.49
TRAF3-209ENST00000560463 ABCC11Q96J66 1382 aa11.95□□□□□ -0.5
TRAF3-209ENST00000560463 ANKLE2Q86XL3 938 aa11.95□□□□□ -0.5
TRAF3-209ENST00000560463 KDM4FA0A1W2PPD8 638 aa11.94□□□□□ -0.5
TRAF3-209ENST00000560463 BCANQ96GW7 911 aa11.94□□□□□ -0.5
TRAF3-209ENST00000560463 TBX22Q9Y458 520 aa11.94□□□□□ -0.5
TRAF3-209ENST00000560463 FAM135BQ49AJ0 1406 aa11.94□□□□□ -0.5
TRAF3-209ENST00000560463 PIK3R4Q99570 1358 aa11.93□□□□□ -0.5
TRAF3-209ENST00000560463 DISP3Q9P2K9 1392 aa11.93□□□□□ -0.5
TRAF3-209ENST00000560463 SIRT1Q96EB6 747 aa11.93□□□□□ -0.5
TRAF3-209ENST00000560463 METP08581 1390 aa11.92□□□□□ -0.5
TRAF3-209ENST00000560463 STRCQ7RTU9 1775 aa11.92□□□□□ -0.5
TRAF3-209ENST00000560463 PUS7Q96PZ0 661 aaKnown RBP11.92□□□□□ -0.5
TRAF3-209ENST00000560463 ITSN1Q15811 1721 aa11.91□□□□□ -0.5
TRAF3-209ENST00000560463 ADGRB2O60241 1585 aa11.91□□□□□ -0.5
TRAF3-209ENST00000560463 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.91□□□□□ -0.5
TRAF3-209ENST00000560463 TULP4Q9NRJ4 1543 aa11.91□□□□□ -0.5
TRAF3-209ENST00000560463 STK26Q9P289 416 aa11.9□□□□□ -0.5
TRAF3-209ENST00000560463 RGPD8O14715 1765 aaPredicted RBP11.9□□□□□ -0.51
TRAF3-209ENST00000560463 EVC2Q86UK5 1308 aa11.89□□□□□ -0.51
TRAF3-209ENST00000560463 NPHP4O75161 1426 aaPredicted RBP11.89□□□□□ -0.51
TRAF3-209ENST00000560463 POGKQ9P215 609 aa11.89□□□□□ -0.51
TRAF3-209ENST00000560463 PTCH1Q13635 1447 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms