RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 PPP1R18Q6NYC8 613 aa10.66□□□□□ -0.7
USP8-210ENST00000560379 PADI6Q6TGC4 694 aa10.66□□□□□ -0.7
USP8-210ENST00000560379 KCNV2Q8TDN2 545 aa10.66□□□□□ -0.7
USP8-210ENST00000560379 IL21Q9HBE4 155 aa10.66□□□□□ -0.7
USP8-210ENST00000560379 NKX2-3Q8TAU0 364 aa10.64□□□□□ -0.71
USP8-210ENST00000560379 PRKD2Q9BZL6 878 aa10.64□□□□□ -0.71
USP8-210ENST00000560379 SHROOM4Q9ULL8 1493 aa10.63□□□□□ -0.71
USP8-210ENST00000560379 RNF40O75150 1001 aa10.63□□□□□ -0.71
USP8-210ENST00000560379 SWT1Q5T5J6 900 aaKnown RBP10.63□□□□□ -0.71
USP8-210ENST00000560379 WDR70Q9NW82 654 aa10.63□□□□□ -0.71
USP8-210ENST00000560379 SUPT5HO00267 1087 aaKnown RBP10.62□□□□□ -0.71
USP8-210ENST00000560379 GFRA3O60609 400 aa10.61□□□□□ -0.71
USP8-210ENST00000560379 SCRIBQ14160 1630 aa10.6□□□□□ -0.71
USP8-210ENST00000560379 MLLT3P42568 568 aaPredicted RBP10.59□□□□□ -0.71
USP8-210ENST00000560379 EYA1Q99502 592 aa10.59□□□□□ -0.71
USP8-210ENST00000560379 BICRAQ9NZM4 1560 aa10.58□□□□□ -0.72
USP8-210ENST00000560379 RANGAP1P46060 587 aaPredicted RBP10.58□□□□□ -0.72
USP8-210ENST00000560379 LAPTM4AQ15012 233 aa10.58□□□□□ -0.72
USP8-210ENST00000560379 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.58□□□□□ -0.72
USP8-210ENST00000560379 COPS2P61201 443 aa10.56□□□□□ -0.72
USP8-210ENST00000560379 NEUROD2Q15784 382 aa10.56□□□□□ -0.72
USP8-210ENST00000560379 V9GY48 417 aaPredicted RBP10.56□□□□□ -0.72
USP8-210ENST00000560379 TRAF7Q6Q0C0 670 aa10.55□□□□□ -0.72
USP8-210ENST00000560379 NRG2O14511 850 aaPredicted RBP10.54□□□□□ -0.72
USP8-210ENST00000560379 ZC3H15Q8WU90 426 aaKnown RBP10.54□□□□□ -0.72
USP8-210ENST00000560379 SLF2Q8IX21 1173 aa10.53□□□□□ -0.72
USP8-210ENST00000560379 HDGFP51858 240 aaKnown RBP10.52□□□□□ -0.73
USP8-210ENST00000560379 EMID1Q96A84 441 aaPredicted RBP10.52□□□□□ -0.73
USP8-210ENST00000560379 ZPR1O75312 459 aa10.5□□□□□ -0.73
USP8-210ENST00000560379 SLC24A3Q9HC58 644 aa10.5□□□□□ -0.73
USP8-210ENST00000560379 PTGDRQ13258 359 aa10.49□□□□□ -0.73
USP8-210ENST00000560379 TLL1O43897 1013 aa10.47□□□□□ -0.73
USP8-210ENST00000560379 BLOC1S3Q6QNY0 202 aa10.47□□□□□ -0.73
USP8-210ENST00000560379 TRIM67Q6ZTA4 783 aa10.47□□□□□ -0.73
USP8-210ENST00000560379 ARHGEF1Q92888 912 aaKnown RBP10.47□□□□□ -0.73
USP8-210ENST00000560379 ADGRG1Q9Y653 693 aa10.47□□□□□ -0.73
USP8-210ENST00000560379 FAM161AQ3B820 660 aa10.46□□□□□ -0.73
USP8-210ENST00000560379 NECTIN2Q92692 538 aa10.46□□□□□ -0.73
USP8-210ENST00000560379 TTBK1Q5TCY1 1321 aaPredicted RBP10.46□□□□□ -0.73
USP8-210ENST00000560379 TMEM134Q9H6X4 195 aa10.45□□□□□ -0.74
USP8-210ENST00000560379 PDZRN3Q9UPQ7 1066 aa10.45□□□□□ -0.74
USP8-210ENST00000560379 PCDHB3Q9Y5E6 796 aa10.45□□□□□ -0.74
USP8-210ENST00000560379 RNF223E7ERA6 249 aa10.44□□□□□ -0.74
USP8-210ENST00000560379 DNAJB2P25686 324 aa10.44□□□□□ -0.74
USP8-210ENST00000560379 PODXL2Q9NZ53 605 aa10.44□□□□□ -0.74
USP8-210ENST00000560379 TMUB1Q9BVT8 246 aa10.43□□□□□ -0.74
USP8-210ENST00000560379 GGCXP38435 758 aa10.41□□□□□ -0.74
USP8-210ENST00000560379 TESPA1A2RU30 521 aaPredicted RBP10.4□□□□□ -0.74
USP8-210ENST00000560379 RCCD1A6NED2 376 aa10.4□□□□□ -0.74
USP8-210ENST00000560379 SEMA3EO15041 775 aa10.4□□□□□ -0.74
USP8-210ENST00000560379 SLC10A3P09131 477 aa10.4□□□□□ -0.74
USP8-210ENST00000560379 PPEF1O14829 653 aaPredicted RBP10.39□□□□□ -0.75
USP8-210ENST00000560379 PRR14Q9BWN1 585 aa10.39□□□□□ -0.75
USP8-210ENST00000560379 ACTN4O43707 911 aaKnown RBP10.38□□□□□ -0.75
USP8-210ENST00000560379 RBM46Q8TBY0 533 aaKnown RBP10.38□□□□□ -0.75
USP8-210ENST00000560379 ZMYND10O75800 440 aa10.37□□□□□ -0.75
USP8-210ENST00000560379 S1PR4O95977 384 aa10.37□□□□□ -0.75
USP8-210ENST00000560379 CFHP08603 1231 aa10.37□□□□□ -0.75
USP8-210ENST00000560379 UBTFP17480 764 aaKnown RBP10.36□□□□□ -0.75
USP8-210ENST00000560379 SLC19A1P41440 591 aa10.36□□□□□ -0.75
USP8-210ENST00000560379 SLC4A3P48751 1232 aa10.36□□□□□ -0.75
USP8-210ENST00000560379 NUTM2FA1L443 756 aa10.35□□□□□ -0.75
USP8-210ENST00000560379 SPRYD7Q5W111 196 aa10.35□□□□□ -0.75
USP8-210ENST00000560379 LIAT1Q6ZQX7 453 aa10.35□□□□□ -0.75
USP8-210ENST00000560379 ANKLE1Q8NAG6 615 aa10.34□□□□□ -0.75
USP8-210ENST00000560379 PLA2G2CQ5R387 149 aa10.33□□□□□ -0.76
USP8-210ENST00000560379 EIF4G1Q04637 1599 aaKnown RBP10.32□□□□□ -0.76
USP8-210ENST00000560379 KMT5BQ4FZB7 885 aa10.32□□□□□ -0.76
USP8-210ENST00000560379 ZNF787Q6DD87 383 aa10.32□□□□□ -0.76
USP8-210ENST00000560379 PXYLP1Q8TE99 480 aa10.32□□□□□ -0.76
USP8-210ENST00000560379 ZNF598Q86UK7 904 aaKnown RBP10.31□□□□□ -0.76
USP8-210ENST00000560379 FCHSD2O94868 740 aa10.3□□□□□ -0.76
USP8-210ENST00000560379 ADH1BP00325 375 aa10.3□□□□□ -0.76
USP8-210ENST00000560379 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.29□□□□□ -0.76
USP8-210ENST00000560379 PRR20EP86478 221 aa10.29□□□□□ -0.76
USP8-210ENST00000560379 PRR20CP86479 221 aa10.29□□□□□ -0.76
USP8-210ENST00000560379 PRR20DP86480 221 aa10.29□□□□□ -0.76
USP8-210ENST00000560379 PRR20BP86481 221 aa10.29□□□□□ -0.76
USP8-210ENST00000560379 PRR20AP86496 221 aa10.29□□□□□ -0.76
USP8-210ENST00000560379 MYT1Q01538 1121 aa10.29□□□□□ -0.76
USP8-210ENST00000560379 SMYD5Q6GMV2 418 aa10.29□□□□□ -0.76
USP8-210ENST00000560379 ZMYND15Q9H091 742 aa10.29□□□□□ -0.76
USP8-210ENST00000560379 GDF9O60383 454 aa10.28□□□□□ -0.76
USP8-210ENST00000560379 BARGINQ6ZT62 677 aa10.28□□□□□ -0.76
USP8-210ENST00000560379 ZNF775Q96BV0 537 aaPredicted RBP10.28□□□□□ -0.76
USP8-210ENST00000560379 POTECB2RU33 542 aa10.27□□□□□ -0.77
USP8-210ENST00000560379 ZNF697Q5TEC3 545 aa10.27□□□□□ -0.77
USP8-210ENST00000560379 GPR37O15354 613 aa10.26□□□□□ -0.77
USP8-210ENST00000560379 FECHP22830 423 aa10.26□□□□□ -0.77
USP8-210ENST00000560379 PUS10Q3MIT2 529 aaKnown RBP10.26□□□□□ -0.77
USP8-210ENST00000560379 METTL3Q86U44 580 aaKnown RBP10.26□□□□□ -0.77
USP8-210ENST00000560379 TNFRSF10AO00220 468 aa10.25□□□□□ -0.77
USP8-210ENST00000560379 SCUBE3Q8IX30 993 aa10.25□□□□□ -0.77
USP8-210ENST00000560379 RSPH6AQ9H0K4 717 aa10.25□□□□□ -0.77
USP8-210ENST00000560379 GPBP1L1Q9HC44 474 aaPredicted RBP10.25□□□□□ -0.77
USP8-210ENST00000560379 NR1I2O75469 434 aa10.24□□□□□ -0.77
USP8-210ENST00000560379 TRIM26Q12899 539 aaPredicted RBP10.24□□□□□ -0.77
USP8-210ENST00000560379 RBM26Q5T8P6 1007 aaKnown RBP10.24□□□□□ -0.77
USP8-210ENST00000560379 SLC6A16Q9GZN6 736 aa10.24□□□□□ -0.77
USP8-210ENST00000560379 CC2D2AQ9P2K1 1620 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms