RNA–Protein interactions for RNA: ENST00000560273.2

TUBBP8-201, Transcript of tubulin beta class I pseudogene 8, humanhuman

BASIC

Gene TUBBP8, Length 1,232 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP8-201ENST00000560273 PIK3C2BO00750 1634 aa13.74□□□□□ -0.21
TUBBP8-201ENST00000560273 ADGRB3O60242 1522 aa13.74□□□□□ -0.21
TUBBP8-201ENST00000560273 DHX57Q6P158 1386 aaKnown RBP13.73□□□□□ -0.21
TUBBP8-201ENST00000560273 NUTM2DQ5VT03 806 aaPredicted RBP13.73□□□□□ -0.21
TUBBP8-201ENST00000560273 BCANQ96GW7 911 aa13.73□□□□□ -0.21
TUBBP8-201ENST00000560273 SPHKAPQ2M3C7 1700 aa13.73□□□□□ -0.21
TUBBP8-201ENST00000560273 RPGRIP1LQ68CZ1 1315 aa13.72□□□□□ -0.21
TUBBP8-201ENST00000560273 ARHGAP23Q9P227 1491 aa13.72□□□□□ -0.21
TUBBP8-201ENST00000560273 RIMS2Q9UQ26 1411 aa13.72□□□□□ -0.21
TUBBP8-201ENST00000560273 SLIT1O75093 1534 aa13.71□□□□□ -0.21
TUBBP8-201ENST00000560273 CERKQ8TCT0 537 aa13.71□□□□□ -0.21
TUBBP8-201ENST00000560273 SCAF11Q99590 1463 aaKnown RBP13.7□□□□□ -0.22
TUBBP8-201ENST00000560273 VGFO15240 615 aaPredicted RBP13.7□□□□□ -0.22
TUBBP8-201ENST00000560273 CLTCL1P53675 1640 aa13.7□□□□□ -0.22
TUBBP8-201ENST00000560273 UBR1Q8IWV7 1749 aa13.7□□□□□ -0.22
TUBBP8-201ENST00000560273 TMEM131LA2VDJ0 1609 aa13.69□□□□□ -0.22
TUBBP8-201ENST00000560273 NCBP3Q53F19 620 aaKnown RBP13.69□□□□□ -0.22
TUBBP8-201ENST00000560273 NPHP4O75161 1426 aaPredicted RBP13.69□□□□□ -0.22
TUBBP8-201ENST00000560273 ZFYVE9O95405 1425 aa13.68□□□□□ -0.22
TUBBP8-201ENST00000560273 NEUROD1Q13562 356 aa13.68□□□□□ -0.22
TUBBP8-201ENST00000560273 SIN3AQ96ST3 1273 aa13.68□□□□□ -0.22
TUBBP8-201ENST00000560273 SPATA31E1Q6ZUB1 1445 aa13.67□□□□□ -0.22
TUBBP8-201ENST00000560273 KDM5AP29375 1690 aaKnown RBP13.67□□□□□ -0.22
TUBBP8-201ENST00000560273 MED14O60244 1454 aa13.67□□□□□ -0.22
TUBBP8-201ENST00000560273 SLC26A8Q96RN1 970 aa13.66□□□□□ -0.22
TUBBP8-201ENST00000560273 DISP3Q9P2K9 1392 aa13.66□□□□□ -0.22
TUBBP8-201ENST00000560273 PLEKHG1Q9ULL1 1385 aa13.66□□□□□ -0.22
TUBBP8-201ENST00000560273 CCER1Q8TC90 406 aaPredicted RBP13.65□□□□□ -0.22
TUBBP8-201ENST00000560273 SOCS7O14512 581 aa13.64□□□□□ -0.23
TUBBP8-201ENST00000560273 KCNA4P22459 653 aa13.64□□□□□ -0.23
TUBBP8-201ENST00000560273 DCAF11Q8TEB1 546 aa13.64□□□□□ -0.23
TUBBP8-201ENST00000560273 STRCQ7RTU9 1775 aa13.63□□□□□ -0.23
TUBBP8-201ENST00000560273 STAC3Q96MF2 364 aa13.63□□□□□ -0.23
TUBBP8-201ENST00000560273 KDM2AQ9Y2K7 1162 aa13.63□□□□□ -0.23
TUBBP8-201ENST00000560273 TBX22Q9Y458 520 aa13.63□□□□□ -0.23
TUBBP8-201ENST00000560273 NEURL4Q96JN8 1562 aa13.62□□□□□ -0.23
TUBBP8-201ENST00000560273 ADGRF5Q8IZF2 1346 aa13.62□□□□□ -0.23
TUBBP8-201ENST00000560273 KIF1BO60333 1816 aa13.61□□□□□ -0.23
TUBBP8-201ENST00000560273 ZNF335Q9H4Z2 1342 aaPredicted RBP13.61□□□□□ -0.23
TUBBP8-201ENST00000560273 NEXMIFQ5QGS0 1516 aa13.6□□□□□ -0.23
TUBBP8-201ENST00000560273 CLSPNQ9HAW4 1339 aa13.6□□□□□ -0.23
TUBBP8-201ENST00000560273 ILDR2Q71H61 639 aa13.59□□□□□ -0.23
TUBBP8-201ENST00000560273 L3MBTL2Q969R5 705 aa13.59□□□□□ -0.23
TUBBP8-201ENST00000560273 KCNA6P17658 529 aa13.58□□□□□ -0.24
TUBBP8-201ENST00000560273 ADAMTS13Q76LX8 1427 aa13.57□□□□□ -0.24
TUBBP8-201ENST00000560273 MYO5BQ9ULV0 1848 aa13.57□□□□□ -0.24
TUBBP8-201ENST00000560273 IQGAP1P46940 1657 aa13.56□□□□□ -0.24
TUBBP8-201ENST00000560273 POLR1AO95602 1720 aaPredicted RBP13.56□□□□□ -0.24
TUBBP8-201ENST00000560273 TONSLQ96HA7 1378 aa13.56□□□□□ -0.24
TUBBP8-201ENST00000560273 CFAP70Q5T0N1 1121 aa13.55□□□□□ -0.24
TUBBP8-201ENST00000560273 C14orf93Q9H972 538 aaKnown RBP13.55□□□□□ -0.24
TUBBP8-201ENST00000560273 AMOTL2Q9Y2J4 779 aa13.55□□□□□ -0.24
TUBBP8-201ENST00000560273 PIK3R4Q99570 1358 aa13.55□□□□□ -0.24
TUBBP8-201ENST00000560273 METP08581 1390 aa13.54□□□□□ -0.24
TUBBP8-201ENST00000560273 MYOM2P54296 1465 aa13.54□□□□□ -0.24
TUBBP8-201ENST00000560273 PIK3C2GO75747 1445 aa13.53□□□□□ -0.24
TUBBP8-201ENST00000560273 SETBP1Q9Y6X0 1596 aa13.53□□□□□ -0.24
TUBBP8-201ENST00000560273 NPM3O75607 178 aaKnown RBP13.52□□□□□ -0.25
TUBBP8-201ENST00000560273 TMEM132EQ6IEE7 984 aa13.52□□□□□ -0.25
TUBBP8-201ENST00000560273 PROSER2Q86WR7 435 aaPredicted RBP13.52□□□□□ -0.25
TUBBP8-201ENST00000560273 TIMELESSQ9UNS1 1208 aa13.52□□□□□ -0.25
TUBBP8-201ENST00000560273 NRXN1Q9ULB1 1477 aa13.51□□□□□ -0.25
TUBBP8-201ENST00000560273 RNF216Q9NWF9 866 aaPredicted RBP13.51□□□□□ -0.25
TUBBP8-201ENST00000560273 DIP2AQ14689 1571 aa13.5□□□□□ -0.25
TUBBP8-201ENST00000560273 HOXD11P31277 338 aaPredicted RBP13.5□□□□□ -0.25
TUBBP8-201ENST00000560273 STK26Q9P289 416 aa13.5□□□□□ -0.25
TUBBP8-201ENST00000560273 PPLO60437 1756 aa13.5□□□□□ -0.25
TUBBP8-201ENST00000560273 ALKQ9UM73 1620 aa13.5□□□□□ -0.25
TUBBP8-201ENST00000560273 IQSEC2Q5JU85 1478 aa13.49□□□□□ -0.25
TUBBP8-201ENST00000560273 LTBP4Q8N2S1 1624 aa13.49□□□□□ -0.25
TUBBP8-201ENST00000560273 CPS1P31327 1500 aa13.49□□□□□ -0.25
TUBBP8-201ENST00000560273 PTPRUQ92729 1446 aa13.48□□□□□ -0.25
TUBBP8-201ENST00000560273 RBM33Q96EV2 1170 aaKnown RBP13.48□□□□□ -0.25
TUBBP8-201ENST00000560273 C14orf37Q86TY3 774 aa13.47□□□□□ -0.25
TUBBP8-201ENST00000560273 PRAG1Q86YV5 1406 aa13.47□□□□□ -0.25
TUBBP8-201ENST00000560273 TMEM94Q12767 1356 aa13.46□□□□□ -0.25
TUBBP8-201ENST00000560273 NRXN3Q9Y4C0 1643 aa13.46□□□□□ -0.25
TUBBP8-201ENST00000560273 NBPF1Q3BBV0 1214 aa13.46□□□□□ -0.25
TUBBP8-201ENST00000560273 LRPPRCP42704 1394 aaKnown RBP13.45□□□□□ -0.26
TUBBP8-201ENST00000560273 ABCC11Q96J66 1382 aa13.45□□□□□ -0.26
TUBBP8-201ENST00000560273 IFT172Q9UG01 1749 aa13.45□□□□□ -0.26
TUBBP8-201ENST00000560273 NBPF8Q3BBV2 869 aa13.45□□□□□ -0.26
TUBBP8-201ENST00000560273 LRRC7Q96NW7 1537 aa13.44□□□□□ -0.26
TUBBP8-201ENST00000560273 NKTRP30414 1462 aaKnown RBP13.44□□□□□ -0.26
TUBBP8-201ENST00000560273 SIRT1Q96EB6 747 aa13.44□□□□□ -0.26
TUBBP8-201ENST00000560273 TRAK1Q9UPV9 953 aa13.44□□□□□ -0.26
TUBBP8-201ENST00000560273 YTHDC2Q9H6S0 1430 aaKnown RBP13.44□□□□□ -0.26
TUBBP8-201ENST00000560273 ROBO2Q9HCK4 1378 aa13.43□□□□□ -0.26
TUBBP8-201ENST00000560273 WAPLQ7Z5K2 1190 aa13.42□□□□□ -0.26
TUBBP8-201ENST00000560273 C19orf44Q9H6X5 657 aa13.42□□□□□ -0.26
TUBBP8-201ENST00000560273 POGKQ9P215 609 aa13.42□□□□□ -0.26
TUBBP8-201ENST00000560273 NWD1Q149M9 1564 aa13.41□□□□□ -0.26
TUBBP8-201ENST00000560273 NCOA3Q9Y6Q9 1424 aa13.41□□□□□ -0.26
TUBBP8-201ENST00000560273 UBAP1LF5GYI3 381 aa13.41□□□□□ -0.26
TUBBP8-201ENST00000560273 TOM1O60784 492 aa13.41□□□□□ -0.26
TUBBP8-201ENST00000560273 ROCK2O75116 1388 aaKnown RBP13.41□□□□□ -0.26
TUBBP8-201ENST00000560273 PRAM1Q96QH2 718 aa13.4□□□□□ -0.26
TUBBP8-201ENST00000560273 MSH6P52701 1360 aa13.4□□□□□ -0.26
TUBBP8-201ENST00000560273 TECPR2O15040 1411 aa13.39□□□□□ -0.27
TUBBP8-201ENST00000560273 PTCH1Q13635 1447 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms