RNA–Protein interactions for RNA: ENST00000560222.1

IPO4-212, Transcript of importin 4, humanhuman

TSL 3

Gene IPO4, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-212ENST00000560222 NUTM2EB1AL46 878 aaPredicted RBP25.5■■□□□ 1.67
IPO4-212ENST00000560222 HDGFP51858 240 aaKnown RBP25.5■■□□□ 1.67
IPO4-212ENST00000560222 NUTM2AQ8IVF1 878 aaPredicted RBP25.5■■□□□ 1.67
IPO4-212ENST00000560222 SLC52A1Q9NWF4 448 aa25.5■■□□□ 1.67
IPO4-212ENST00000560222 ATF3P18847 181 aa25.48■■□□□ 1.67
IPO4-212ENST00000560222 ABCC5O15440 1437 aa25.47■■□□□ 1.67
IPO4-212ENST00000560222 LRP6O75581 1613 aa25.45■■□□□ 1.67
IPO4-212ENST00000560222 KDM5AP29375 1690 aaKnown RBP25.45■■□□□ 1.66
IPO4-212ENST00000560222 NWD1Q149M9 1564 aa25.44■■□□□ 1.66
IPO4-212ENST00000560222 CHGAP10645 457 aaKnown RBP25.44■■□□□ 1.66
IPO4-212ENST00000560222 CADPS2Q86UW7 1296 aa25.44■■□□□ 1.66
IPO4-212ENST00000560222 VPS8Q8N3P4 1428 aa25.44■■□□□ 1.66
IPO4-212ENST00000560222 FGD6Q6ZV73 1430 aa25.43■■□□□ 1.66
IPO4-212ENST00000560222 C19orf44Q9H6X5 657 aa25.42■■□□□ 1.66
IPO4-212ENST00000560222 ANKRD30AQ9BXX3 1397 aa25.42■■□□□ 1.66
IPO4-212ENST00000560222 ADGRB3O60242 1522 aa25.42■■□□□ 1.66
IPO4-212ENST00000560222 COL16A1Q07092 1604 aaPredicted RBP25.41■■□□□ 1.66
IPO4-212ENST00000560222 PLEKHG1Q9ULL1 1385 aa25.41■■□□□ 1.66
IPO4-212ENST00000560222 NOS1P29475 1434 aa25.4■■□□□ 1.66
IPO4-212ENST00000560222 NUTM2DQ5VT03 806 aaPredicted RBP25.4■■□□□ 1.66
IPO4-212ENST00000560222 TBX22Q9Y458 520 aa25.4■■□□□ 1.66
IPO4-212ENST00000560222 APLP2Q06481 763 aa25.38■■□□□ 1.65
IPO4-212ENST00000560222 DAPK1P53355 1430 aa25.37■■□□□ 1.65
IPO4-212ENST00000560222 RIMS2Q9UQ26 1411 aa25.37■■□□□ 1.65
IPO4-212ENST00000560222 LMTK2Q8IWU2 1503 aa25.37■■□□□ 1.65
IPO4-212ENST00000560222 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.36■■□□□ 1.65
IPO4-212ENST00000560222 AFF2P51816 1311 aa25.36■■□□□ 1.65
IPO4-212ENST00000560222 NCOA3Q9Y6Q9 1424 aa25.35■■□□□ 1.65
IPO4-212ENST00000560222 CHD2O14647 1828 aaKnown RBP25.35■■□□□ 1.65
IPO4-212ENST00000560222 PTPN23Q9H3S7 1636 aa25.33■■□□□ 1.65
IPO4-212ENST00000560222 CROCC2H7BZ55 1655 aa25.32■■□□□ 1.64
IPO4-212ENST00000560222 ZFYVE9O95405 1425 aa25.32■■□□□ 1.64
IPO4-212ENST00000560222 LOC105371045A0A1W2PR82 267 aa25.32■■□□□ 1.64
IPO4-212ENST00000560222 BRINP3Q76B58 766 aa25.32■■□□□ 1.64
IPO4-212ENST00000560222 C8orf37Q96NL8 207 aa25.3■■□□□ 1.64
IPO4-212ENST00000560222 QTRT2Q9H974 415 aaKnown RBP25.3■■□□□ 1.64
IPO4-212ENST00000560222 AMOTL2Q9Y2J4 779 aa25.29■■□□□ 1.64
IPO4-212ENST00000560222 AHDC1Q5TGY3 1603 aaPredicted RBP25.28■■□□□ 1.64
IPO4-212ENST00000560222 SHPRHQ149N8 1683 aa25.27■■□□□ 1.64
IPO4-212ENST00000560222 CDK12Q9NYV4 1490 aaPredicted RBP25.27■■□□□ 1.64
IPO4-212ENST00000560222 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.26■■□□□ 1.63
IPO4-212ENST00000560222 RBM6P78332 1123 aaKnown RBP25.25■■□□□ 1.63
IPO4-212ENST00000560222 MYO5BQ9ULV0 1848 aa25.24■■□□□ 1.63
IPO4-212ENST00000560222 LRRC59Q96AG4 307 aaKnown RBP25.24■■□□□ 1.63
IPO4-212ENST00000560222 SRCAPQ6ZRS2 3230 aa25.24■■□□□ 1.63
IPO4-212ENST00000560222 RPRD2Q5VT52 1461 aaKnown RBP25.23■■□□□ 1.63
IPO4-212ENST00000560222 FAM50AQ14320 339 aaKnown RBP25.22■■□□□ 1.63
IPO4-212ENST00000560222 ADAMTS13Q76LX8 1427 aa25.21■■□□□ 1.63
IPO4-212ENST00000560222 PIK3R4Q99570 1358 aa25.21■■□□□ 1.63
IPO4-212ENST00000560222 GCC2Q8IWJ2 1684 aa25.21■■□□□ 1.63
IPO4-212ENST00000560222 NGLY1Q96IV0 654 aa25.21■■□□□ 1.63
IPO4-212ENST00000560222 TMEM131LA2VDJ0 1609 aa25.19■■□□□ 1.62
IPO4-212ENST00000560222 ADAMTS2O95450 1211 aa25.19■■□□□ 1.62
IPO4-212ENST00000560222 DDX17Q92841 729 aaKnown RBP25.18■■□□□ 1.62
IPO4-212ENST00000560222 ANKRD50Q9ULJ7 1429 aa25.18■■□□□ 1.62
IPO4-212ENST00000560222 RGS12O14924 1447 aa25.17■■□□□ 1.62
IPO4-212ENST00000560222 FOXD1Q16676 465 aa25.16■■□□□ 1.62
IPO4-212ENST00000560222 DIP2AQ14689 1571 aa25.15■■□□□ 1.62
IPO4-212ENST00000560222 SETD5Q9C0A6 1442 aa25.15■■□□□ 1.62
IPO4-212ENST00000560222 ASXL1Q8IXJ9 1541 aa25.14■■□□□ 1.62
IPO4-212ENST00000560222 ZRANB1Q9UGI0 708 aa25.14■■□□□ 1.62
IPO4-212ENST00000560222 PTPRUQ92729 1446 aa25.12■■□□□ 1.61
IPO4-212ENST00000560222 TRPM2O94759 1503 aa25.12■■□□□ 1.61
IPO4-212ENST00000560222 ATAD2Q6PL18 1390 aa25.11■■□□□ 1.61
IPO4-212ENST00000560222 DCCP43146 1447 aa25.1■■□□□ 1.61
IPO4-212ENST00000560222 ADGRL2O95490 1459 aa25.09■■□□□ 1.61
IPO4-212ENST00000560222 PNPLA6Q8IY17 1366 aa25.08■■□□□ 1.61
IPO4-212ENST00000560222 ZNF326Q5BKZ1 582 aaKnown RBP25.08■■□□□ 1.61
IPO4-212ENST00000560222 USP21Q9UK80 565 aa25.08■■□□□ 1.61
IPO4-212ENST00000560222 MST1RQ04912 1400 aa25.08■■□□□ 1.61
IPO4-212ENST00000560222 TRPC5Q9UL62 973 aaPredicted RBP25.04■■□□□ 1.6
IPO4-212ENST00000560222 NHSL1Q5SYE7 1610 aa25■■□□□ 1.59
IPO4-212ENST00000560222 METP08581 1390 aa24.99■■□□□ 1.59
IPO4-212ENST00000560222 UNC13BO14795 1591 aa24.98■■□□□ 1.59
IPO4-212ENST00000560222 E9PCH4 1651 aa24.97■■□□□ 1.59
IPO4-212ENST00000560222 NUP155O75694 1391 aa24.97■■□□□ 1.59
IPO4-212ENST00000560222 ADGRL3Q9HAR2 1447 aa24.95■■□□□ 1.59
IPO4-212ENST00000560222 ORAI2Q96SN7 254 aa24.95■■□□□ 1.58
IPO4-212ENST00000560222 CCDC125Q86Z20 511 aa24.94■■□□□ 1.58
IPO4-212ENST00000560222 FNBP4Q8N3X1 1017 aaPredicted RBP24.93■■□□□ 1.58
IPO4-212ENST00000560222 XRN1Q8IZH2 1706 aaKnown RBP24.92■■□□□ 1.58
IPO4-212ENST00000560222 C1orf167Q5SNV9 1468 aa24.91■■□□□ 1.58
IPO4-212ENST00000560222 SOS2Q07890 1332 aaPredicted RBP24.89■■□□□ 1.58
IPO4-212ENST00000560222 SETBP1Q9Y6X0 1596 aa24.89■■□□□ 1.58
IPO4-212ENST00000560222 ITGAEP38570 1179 aa24.89■■□□□ 1.58
IPO4-212ENST00000560222 PTCH1Q13635 1447 aa24.86■■□□□ 1.57
IPO4-212ENST00000560222 NRXN3Q9Y4C0 1643 aa24.86■■□□□ 1.57
IPO4-212ENST00000560222 ATRNO75882 1429 aa24.86■■□□□ 1.57
IPO4-212ENST00000560222 IQGAP3Q86VI3 1631 aa24.84■■□□□ 1.57
IPO4-212ENST00000560222 GJD4Q96KN9 370 aaPredicted RBP24.83■■□□□ 1.57
IPO4-212ENST00000560222 ESCO1Q5FWF5 840 aa24.82■■□□□ 1.56
IPO4-212ENST00000560222 NALCNQ8IZF0 1738 aa24.82■■□□□ 1.56
IPO4-212ENST00000560222 EP400Q96L91 3159 aa24.81■■□□□ 1.56
IPO4-212ENST00000560222 ROCK1Q13464 1354 aa24.8■■□□□ 1.56
IPO4-212ENST00000560222 XPCQ01831 940 aaPredicted RBP24.8■■□□□ 1.56
IPO4-212ENST00000560222 SF3B2Q13435 895 aaKnown RBP24.79■■□□□ 1.56
IPO4-212ENST00000560222 ROBO2Q9HCK4 1378 aa24.78■■□□□ 1.56
IPO4-212ENST00000560222 NPHP3Q7Z494 1330 aa24.77■■□□□ 1.56
IPO4-212ENST00000560222 FOXO3O43524 673 aa24.76■■□□□ 1.55
IPO4-212ENST00000560222 DEFB132Q7Z7B7 95 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms