RNA–Protein interactions for RNA: ENST00000559659.1

NUSAP1-209, Transcript of nucleolar and spindle associated protein 1, human

TSL 2

Gene NUSAP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUSAP1-209	ENST00000559659	SPATA31D1	Q6ZQQ2	1576 aa		11.41	□□□□□ -0.58
NUSAP1-209	ENST00000559659	IQGAP1	P46940	1657 aa		11.4	□□□□□ -0.58
NUSAP1-209	ENST00000559659	RGL3	Q3MIN7	710 aa		11.39	□□□□□ -0.59
NUSAP1-209	ENST00000559659	CARD11	Q9BXL7	1154 aa		11.38	□□□□□ -0.59
NUSAP1-209	ENST00000559659	KDM2A	Q9Y2K7	1162 aa		11.38	□□□□□ -0.59
NUSAP1-209	ENST00000559659	FER1L4	A9Z1Z3	1794 aa		11.38	□□□□□ -0.59
NUSAP1-209	ENST00000559659	NRXN1	Q9ULB1	1477 aa		11.38	□□□□□ -0.59
NUSAP1-209	ENST00000559659	MYO5B	Q9ULV0	1848 aa		11.37	□□□□□ -0.59
NUSAP1-209	ENST00000559659	TRH	P20396	242 aa	Predicted RBP	11.37	□□□□□ -0.59
NUSAP1-209	ENST00000559659	SETBP1	Q9Y6X0	1596 aa		11.37	□□□□□ -0.59
NUSAP1-209	ENST00000559659	KDM5A	P29375	1690 aa	Known RBP	11.36	□□□□□ -0.59
NUSAP1-209	ENST00000559659	TMEM131L	A2VDJ0	1609 aa		11.36	□□□□□ -0.59
NUSAP1-209	ENST00000559659	SLC52A1	Q9NWF4	448 aa		11.36	□□□□□ -0.59
NUSAP1-209	ENST00000559659	ARID4B	Q4LE39	1312 aa	Predicted RBP	11.35	□□□□□ -0.59
NUSAP1-209	ENST00000559659	RPGRIP1L	Q68CZ1	1315 aa		11.35	□□□□□ -0.59
NUSAP1-209	ENST00000559659	NEXMIF	Q5QGS0	1516 aa		11.35	□□□□□ -0.59
NUSAP1-209	ENST00000559659	ESF1	Q9H501	851 aa	Known RBP	11.35	□□□□□ -0.59
NUSAP1-209	ENST00000559659	EIF3A	Q14152	1382 aa	Known RBP	11.35	□□□□□ -0.59
NUSAP1-209	ENST00000559659	CCDC7	Q96M83	1385 aa		11.35	□□□□□ -0.59
NUSAP1-209	ENST00000559659	SCAF11	Q99590	1463 aa	Known RBP	11.33	□□□□□ -0.6
NUSAP1-209	ENST00000559659	MYO3A	Q8NEV4	1616 aa		11.33	□□□□□ -0.6
NUSAP1-209	ENST00000559659	PIK3C2G	O75747	1445 aa		11.33	□□□□□ -0.6
NUSAP1-209	ENST00000559659	HIRIP3	Q9BW71	556 aa	Predicted RBP	11.32	□□□□□ -0.6
NUSAP1-209	ENST00000559659	ZFYVE9	O95405	1425 aa		11.32	□□□□□ -0.6
NUSAP1-209	ENST00000559659	WASHC2A	Q641Q2	1341 aa		11.31	□□□□□ -0.6
NUSAP1-209	ENST00000559659	CHGA	P10645	457 aa	Known RBP	11.3	□□□□□ -0.6
NUSAP1-209	ENST00000559659	DDX10	Q13206	875 aa	Known RBP	11.3	□□□□□ -0.6
NUSAP1-209	ENST00000559659	C3	P01024	1663 aa		11.3	□□□□□ -0.6
NUSAP1-209	ENST00000559659	KIF7	Q2M1P5	1343 aa		11.29	□□□□□ -0.6
NUSAP1-209	ENST00000559659	MLEC	Q14165	292 aa		11.28	□□□□□ -0.6
NUSAP1-209	ENST00000559659	MIER1	Q8N108	512 aa		11.28	□□□□□ -0.6
NUSAP1-209	ENST00000559659	ZMYM3	Q14202	1370 aa		11.28	□□□□□ -0.6
NUSAP1-209	ENST00000559659	NLRP1	Q9C000	1473 aa		11.27	□□□□□ -0.6
NUSAP1-209	ENST00000559659	ANP32C	O43423	234 aa		11.27	□□□□□ -0.61
NUSAP1-209	ENST00000559659	TNR	Q92752	1358 aa		11.27	□□□□□ -0.61
NUSAP1-209	ENST00000559659	UBR1	Q8IWV7	1749 aa		11.26	□□□□□ -0.61
NUSAP1-209	ENST00000559659	A2ML1	A8K2U0	1454 aa		11.26	□□□□□ -0.61
NUSAP1-209	ENST00000559659	ADGRB1	O14514	1584 aa		11.26	□□□□□ -0.61
NUSAP1-209	ENST00000559659	VGF	O15240	615 aa	Predicted RBP	11.26	□□□□□ -0.61
NUSAP1-209	ENST00000559659	SLC24A1	O60721	1099 aa		11.26	□□□□□ -0.61
NUSAP1-209	ENST00000559659	IDI1	Q13907	227 aa		11.26	□□□□□ -0.61
NUSAP1-209	ENST00000559659	ADGRF5	Q8IZF2	1346 aa		11.26	□□□□□ -0.61
NUSAP1-209	ENST00000559659	QRICH2	Q9H0J4	1663 aa		11.26	□□□□□ -0.61
NUSAP1-209	ENST00000559659	ARHGEF28	Q8N1W1	1705 aa	Known RBP	11.26	□□□□□ -0.61
NUSAP1-209	ENST00000559659	ST20-MTHFS	A0A0A6YYL1	179 aa		11.25	□□□□□ -0.61
NUSAP1-209	ENST00000559659	NBPF1	Q3BBV0	1214 aa		11.25	□□□□□ -0.61
NUSAP1-209	ENST00000559659	SBNO2	Q9Y2G9	1366 aa		11.25	□□□□□ -0.61
NUSAP1-209	ENST00000559659	RIMS1	Q86UR5	1692 aa	Known RBP	11.24	□□□□□ -0.61
NUSAP1-209	ENST00000559659	STAG3	Q9UJ98	1225 aa		11.24	□□□□□ -0.61
NUSAP1-209	ENST00000559659	TMF1	P82094	1093 aa		11.23	□□□□□ -0.61
NUSAP1-209	ENST00000559659	SETD1A	O15047	1707 aa	Known RBP	11.22	□□□□□ -0.61
NUSAP1-209	ENST00000559659	ADAMTSL3	P82987	1691 aa		11.22	□□□□□ -0.61
NUSAP1-209	ENST00000559659	CDCA8	Q53HL2	280 aa		11.22	□□□□□ -0.61
NUSAP1-209	ENST00000559659	FBXO31	Q5XUX0	539 aa	Predicted RBP	11.22	□□□□□ -0.61
NUSAP1-209	ENST00000559659	RIMS2	Q9UQ26	1411 aa		11.22	□□□□□ -0.61
NUSAP1-209	ENST00000559659	ZNF142	P52746	1687 aa	Predicted RBP	11.21	□□□□□ -0.61
NUSAP1-209	ENST00000559659	ASXL1	Q8IXJ9	1541 aa		11.21	□□□□□ -0.61
NUSAP1-209	ENST00000559659	C11orf95	C9JLR9	678 aa	Predicted RBP	11.21	□□□□□ -0.61
NUSAP1-209	ENST00000559659	CCER2	I3L3R5	266 aa		11.21	□□□□□ -0.61
NUSAP1-209	ENST00000559659	C14orf93	Q9H972	538 aa	Known RBP	11.21	□□□□□ -0.61
NUSAP1-209	ENST00000559659	KNDC1	Q76NI1	1749 aa		11.21	□□□□□ -0.62
NUSAP1-209	ENST00000559659	MYOM1	P52179	1685 aa		11.2	□□□□□ -0.62
NUSAP1-209	ENST00000559659	ALK	Q9UM73	1620 aa		11.2	□□□□□ -0.62
NUSAP1-209	ENST00000559659	CFAP70	Q5T0N1	1121 aa		11.2	□□□□□ -0.62
NUSAP1-209	ENST00000559659	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
NUSAP1-209	ENST00000559659	TESK2	Q96S53	571 aa		11.2	□□□□□ -0.62
NUSAP1-209	ENST00000559659	DISP3	Q9P2K9	1392 aa		11.19	□□□□□ -0.62
NUSAP1-209	ENST00000559659	CENPB	P07199	599 aa	Predicted RBP	11.19	□□□□□ -0.62
NUSAP1-209	ENST00000559659	KTN1	Q86UP2	1357 aa	Known RBP	11.18	□□□□□ -0.62
NUSAP1-209	ENST00000559659	NRXN3	Q9Y4C0	1643 aa		11.18	□□□□□ -0.62
NUSAP1-209	ENST00000559659	HDGF	P51858	240 aa	Known RBP	11.18	□□□□□ -0.62
NUSAP1-209	ENST00000559659	POLR3GL	Q9BT43	218 aa		11.18	□□□□□ -0.62
NUSAP1-209	ENST00000559659	DLC1	Q96QB1	1528 aa		11.18	□□□□□ -0.62
NUSAP1-209	ENST00000559659	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.17	□□□□□ -0.62
NUSAP1-209	ENST00000559659	DIP2A	Q14689	1571 aa		11.17	□□□□□ -0.62
NUSAP1-209	ENST00000559659	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	11.17	□□□□□ -0.62
NUSAP1-209	ENST00000559659	RNF216	Q9NWF9	866 aa	Predicted RBP	11.17	□□□□□ -0.62
NUSAP1-209	ENST00000559659	SLIT1	O75093	1534 aa		11.17	□□□□□ -0.62
NUSAP1-209	ENST00000559659	SETD1B	Q9UPS6	1966 aa	Known RBP	11.17	□□□□□ -0.62
NUSAP1-209	ENST00000559659	TMEM2	Q9UHN6	1383 aa		11.16	□□□□□ -0.62
NUSAP1-209	ENST00000559659	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.15	□□□□□ -0.62
NUSAP1-209	ENST00000559659	ARHGAP23	Q9P227	1491 aa		11.14	□□□□□ -0.63
NUSAP1-209	ENST00000559659	CPS1	P31327	1500 aa		11.14	□□□□□ -0.63
NUSAP1-209	ENST00000559659	PTPRM	P28827	1452 aa		11.13	□□□□□ -0.63
NUSAP1-209	ENST00000559659	PLEKHG1	Q9ULL1	1385 aa		11.13	□□□□□ -0.63
NUSAP1-209	ENST00000559659	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.12	□□□□□ -0.63
NUSAP1-209	ENST00000559659	LRPPRC	P42704	1394 aa	Known RBP	11.12	□□□□□ -0.63
NUSAP1-209	ENST00000559659	TULP4	Q9NRJ4	1543 aa		11.11	□□□□□ -0.63
NUSAP1-209	ENST00000559659	USP32	Q8NFA0	1604 aa		11.11	□□□□□ -0.63
NUSAP1-209	ENST00000559659	NUTM2D	Q5VT03	806 aa	Predicted RBP	11.11	□□□□□ -0.63
NUSAP1-209	ENST00000559659	TRAK1	Q9UPV9	953 aa		11.11	□□□□□ -0.63
NUSAP1-209	ENST00000559659	NINL	Q9Y2I6	1382 aa		11.11	□□□□□ -0.63
NUSAP1-209	ENST00000559659	TECPR2	O15040	1411 aa		11.1	□□□□□ -0.63
NUSAP1-209	ENST00000559659	PUS7	Q96PZ0	661 aa	Known RBP	11.1	□□□□□ -0.63
NUSAP1-209	ENST00000559659	TMEM132E	Q6IEE7	984 aa		11.09	□□□□□ -0.63
NUSAP1-209	ENST00000559659	PPP4R3CP	Q6ZMV5	832 aa		11.09	□□□□□ -0.63
NUSAP1-209	ENST00000559659	YTHDC1	Q96MU7	727 aa	Known RBP	11.09	□□□□□ -0.63
NUSAP1-209	ENST00000559659	EID1	Q9Y6B2	187 aa		11.09	□□□□□ -0.63
NUSAP1-209	ENST00000559659	EVC2	Q86UK5	1308 aa		11.09	□□□□□ -0.63
NUSAP1-209	ENST00000559659	ABCC11	Q96J66	1382 aa		11.08	□□□□□ -0.64

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